RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-215ENST00000569189 SLC4A1APQ9BWU0 796 aaKnown RBP36.43■■■■□ 3.42
GGA2-215ENST00000569189 PLEKHG1Q9ULL1 1385 aa36.41■■■■□ 3.42
GGA2-215ENST00000569189 PPP1R15AO75807 674 aaPredicted RBP36.41■■■■□ 3.42
GGA2-215ENST00000569189 KIF1BO60333 1816 aa36.39■■■■□ 3.42
GGA2-215ENST00000569189 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.39■■■■□ 3.42
GGA2-215ENST00000569189 LRRC7Q96NW7 1537 aa36.39■■■■□ 3.42
GGA2-215ENST00000569189 UBAP1LF5GYI3 381 aa36.37■■■■□ 3.41
GGA2-215ENST00000569189 SLC26A8Q96RN1 970 aa36.37■■■■□ 3.41
GGA2-215ENST00000569189 SETD5Q9C0A6 1442 aa36.36■■■■□ 3.41
GGA2-215ENST00000569189 BCANQ96GW7 911 aa36.36■■■■□ 3.41
GGA2-215ENST00000569189 NUTM2DQ5VT03 806 aaPredicted RBP36.31■■■■□ 3.4
GGA2-215ENST00000569189 SENP3Q9H4L4 574 aaPredicted RBP36.31■■■■□ 3.4
GGA2-215ENST00000569189 XIRP1Q702N8 1843 aaKnown RBP36.3■■■■□ 3.4
GGA2-215ENST00000569189 NWD1Q149M9 1564 aa36.3■■■■□ 3.4
GGA2-215ENST00000569189 ACIN1Q9UKV3 1341 aaKnown RBP36.28■■■■□ 3.4
GGA2-215ENST00000569189 DIP2AQ14689 1571 aa36.27■■■■□ 3.4
GGA2-215ENST00000569189 CHD2O14647 1828 aaKnown RBP36.27■■■■□ 3.4
GGA2-215ENST00000569189 KCNA6P17658 529 aa36.26■■■■□ 3.4
GGA2-215ENST00000569189 ZNF326Q5BKZ1 582 aaKnown RBP36.26■■■■□ 3.4
GGA2-215ENST00000569189 MPHOSPH9Q99550 1183 aa36.24■■■■□ 3.39
GGA2-215ENST00000569189 NEXMIFQ5QGS0 1516 aa36.24■■■■□ 3.39
GGA2-215ENST00000569189 TOM1O60784 492 aa36.23■■■■□ 3.39
GGA2-215ENST00000569189 FOXD1Q16676 465 aa36.23■■■■□ 3.39
GGA2-215ENST00000569189 RAB3GAP2Q9H2M9 1393 aa36.23■■■■□ 3.39
GGA2-215ENST00000569189 ADAMTS13Q76LX8 1427 aa36.23■■■■□ 3.39
GGA2-215ENST00000569189 NKTRP30414 1462 aaKnown RBP36.22■■■■□ 3.39
GGA2-215ENST00000569189 ALKQ9UM73 1620 aa36.21■■■■□ 3.39
GGA2-215ENST00000569189 TBX22Q9Y458 520 aa36.2■■■■□ 3.39
GGA2-215ENST00000569189 NRXN3Q9Y4C0 1643 aa36.19■■■■□ 3.38
GGA2-215ENST00000569189 SETBP1Q9Y6X0 1596 aa36.18■■■■□ 3.38
GGA2-215ENST00000569189 TMEM94Q12767 1356 aa36.15■■■■□ 3.38
GGA2-215ENST00000569189 CCDC144AA2RUR9 1427 aa36.14■■■■□ 3.38
GGA2-215ENST00000569189 SCAF1Q9H7N4 1312 aaKnown RBP36.13■■■■□ 3.37
GGA2-215ENST00000569189 PIP4K2BP78356 416 aa36.13■■■■□ 3.37
GGA2-215ENST00000569189 PROSER2Q86WR7 435 aaPredicted RBP36.12■■■■□ 3.37
GGA2-215ENST00000569189 PIK3R4Q99570 1358 aa36.12■■■■□ 3.37
GGA2-215ENST00000569189 PPLO60437 1756 aa36.11■■■■□ 3.37
GGA2-215ENST00000569189 RPGRIP1LQ68CZ1 1315 aa36.05■■■■□ 3.36
GGA2-215ENST00000569189 RBM33Q96EV2 1170 aaKnown RBP36.03■■■■□ 3.36
GGA2-215ENST00000569189 PTPRUQ92729 1446 aa36■■■■□ 3.35
GGA2-215ENST00000569189 XRN1Q8IZH2 1706 aaKnown RBP36■■■■□ 3.35
GGA2-215ENST00000569189 VGFO15240 615 aaPredicted RBP36■■■■□ 3.35
GGA2-215ENST00000569189 SPATA31E1Q6ZUB1 1445 aa36■■■■□ 3.35
GGA2-215ENST00000569189 IFT172Q9UG01 1749 aa35.98■■■■□ 3.35
GGA2-215ENST00000569189 HRCP23327 699 aa35.98■■■■□ 3.35
GGA2-215ENST00000569189 SETD1AO15047 1707 aaKnown RBP35.97■■■■□ 3.35
GGA2-215ENST00000569189 AMOTL2Q9Y2J4 779 aa35.96■■■■□ 3.35
GGA2-215ENST00000569189 MSH6P52701 1360 aa35.96■■■■□ 3.35
GGA2-215ENST00000569189 METP08581 1390 aa35.95■■■■□ 3.35
GGA2-215ENST00000569189 NCOA3Q9Y6Q9 1424 aa35.94■■■■□ 3.34
GGA2-215ENST00000569189 HSPA1LP34931 641 aa35.94■■■■□ 3.34
GGA2-215ENST00000569189 RGL3Q3MIN7 710 aa35.91■■■■□ 3.34
GGA2-215ENST00000569189 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.86■■■■□ 3.33
GGA2-215ENST00000569189 ANKRD30BQ9BXX2 1392 aa35.86■■■■□ 3.33
GGA2-215ENST00000569189 C14orf37Q86TY3 774 aa35.85■■■■□ 3.33
GGA2-215ENST00000569189 ROBO1Q9Y6N7 1651 aa35.84■■■■□ 3.33
GGA2-215ENST00000569189 FAM135BQ49AJ0 1406 aa35.83■■■■□ 3.33
GGA2-215ENST00000569189 ADGRF5Q8IZF2 1346 aa35.82■■■■□ 3.32
GGA2-215ENST00000569189 C19orf44Q9H6X5 657 aa35.77■■■■□ 3.32
GGA2-215ENST00000569189 PTCH1Q13635 1447 aa35.75■■■■□ 3.31
GGA2-215ENST00000569189 SLAIN2Q9P270 581 aa35.75■■■■□ 3.31
GGA2-215ENST00000569189 PIK3C2GO75747 1445 aa35.74■■■■□ 3.31
GGA2-215ENST00000569189 PRAG1Q86YV5 1406 aa35.74■■■■□ 3.31
GGA2-215ENST00000569189 NALCNQ8IZF0 1738 aa35.73■■■■□ 3.31
GGA2-215ENST00000569189 MYOM2P54296 1465 aa35.73■■■■□ 3.31
GGA2-215ENST00000569189 CADPS2Q86UW7 1296 aa35.72■■■■□ 3.31
GGA2-215ENST00000569189 DCCP43146 1447 aa35.72■■■■□ 3.31
GGA2-215ENST00000569189 ATF3P18847 181 aa35.71■■■■□ 3.31
GGA2-215ENST00000569189 ADGRL3Q9HAR2 1447 aa35.69■■■■□ 3.3
GGA2-215ENST00000569189 DISP3Q9P2K9 1392 aa35.69■■■■□ 3.3
GGA2-215ENST00000569189 NRXN1Q9ULB1 1477 aa35.68■■■■□ 3.3
GGA2-215ENST00000569189 ROBO2Q9HCK4 1378 aa35.67■■■■□ 3.3
GGA2-215ENST00000569189 LAMC1P11047 1609 aa35.66■■■■□ 3.3
GGA2-215ENST00000569189 ASXL1Q8IXJ9 1541 aa35.66■■■■□ 3.3
GGA2-215ENST00000569189 PHLPP1O60346 1717 aa35.63■■■■□ 3.29
GGA2-215ENST00000569189 MED1Q15648 1581 aaPredicted RBP35.63■■■■□ 3.29
GGA2-215ENST00000569189 KNDC1Q76NI1 1749 aa35.63■■■■□ 3.29
GGA2-215ENST00000569189 LRPPRCP42704 1394 aaKnown RBP35.58■■■■□ 3.29
GGA2-215ENST00000569189 TECPR2O15040 1411 aa35.57■■■■□ 3.29
GGA2-215ENST00000569189 MST1RQ04912 1400 aa35.57■■■■□ 3.29
GGA2-215ENST00000569189 C14orf93Q9H972 538 aaKnown RBP35.56■■■■□ 3.28
GGA2-215ENST00000569189 TMEM132EQ6IEE7 984 aa35.55■■■■□ 3.28
GGA2-215ENST00000569189 STK26Q9P289 416 aa35.54■■■■□ 3.28
GGA2-215ENST00000569189 YTHDC2Q9H6S0 1430 aaKnown RBP35.53■■■■□ 3.28
GGA2-215ENST00000569189 AHDC1Q5TGY3 1603 aaPredicted RBP35.53■■■■□ 3.28
GGA2-215ENST00000569189 ABCC11Q96J66 1382 aa35.52■■■■□ 3.28
GGA2-215ENST00000569189 COL16A1Q07092 1604 aaPredicted RBP35.52■■■■□ 3.28
GGA2-215ENST00000569189 CFAP70Q5T0N1 1121 aa35.51■■■■□ 3.28
GGA2-215ENST00000569189 DCAF11Q8TEB1 546 aa35.5■■■■□ 3.27
GGA2-215ENST00000569189 BRINP3Q76B58 766 aa35.49■■■■□ 3.27
GGA2-215ENST00000569189 DHX57Q6P158 1386 aaKnown RBP35.48■■■■□ 3.27
GGA2-215ENST00000569189 KDM2AQ9Y2K7 1162 aa35.47■■■■□ 3.27
GGA2-215ENST00000569189 CDC42BPGQ6DT37 1551 aa35.47■■■■□ 3.27
GGA2-215ENST00000569189 STAC3Q96MF2 364 aa35.46■■■■□ 3.27
GGA2-215ENST00000569189 NHSL1Q5SYE7 1610 aa35.44■■■■□ 3.26
GGA2-215ENST00000569189 C1orf167Q5SNV9 1468 aa35.42■■■■□ 3.26
GGA2-215ENST00000569189 WAPLQ7Z5K2 1190 aa35.42■■■■□ 3.26
GGA2-215ENST00000569189 ADGRB1O14514 1584 aa35.42■■■■□ 3.26
GGA2-215ENST00000569189 PLEKHH1Q9ULM0 1364 aa35.4■■■■□ 3.26
GGA2-215ENST00000569189 JCADQ9P266 1359 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms