RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
TSC2-220ENST00000568238 RIMS2Q9UQ26 1411 aa19.57■□□□□ 0.72
TSC2-220ENST00000568238 SLC26A8Q96RN1 970 aa19.54■□□□□ 0.72
TSC2-220ENST00000568238 PLEKHG1Q9ULL1 1385 aa19.54■□□□□ 0.72
TSC2-220ENST00000568238 NKTRP30414 1462 aaKnown RBP19.54■□□□□ 0.72
TSC2-220ENST00000568238 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
TSC2-220ENST00000568238 HSPA1LP34931 641 aa19.53■□□□□ 0.72
TSC2-220ENST00000568238 NAIPQ13075 1403 aa19.52■□□□□ 0.72
TSC2-220ENST00000568238 BCANQ96GW7 911 aa19.52■□□□□ 0.72
TSC2-220ENST00000568238 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
TSC2-220ENST00000568238 CHGAP10645 457 aaKnown RBP19.51■□□□□ 0.71
TSC2-220ENST00000568238 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
TSC2-220ENST00000568238 DIP2AQ14689 1571 aa19.5■□□□□ 0.71
TSC2-220ENST00000568238 KCNA6P17658 529 aa19.5■□□□□ 0.71
TSC2-220ENST00000568238 TMEM94Q12767 1356 aa19.48■□□□□ 0.71
TSC2-220ENST00000568238 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.48■□□□□ 0.71
TSC2-220ENST00000568238 HFM1A2PYH4 1435 aa19.48■□□□□ 0.71
TSC2-220ENST00000568238 TRPM2O94759 1503 aa19.47■□□□□ 0.71
TSC2-220ENST00000568238 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
TSC2-220ENST00000568238 MED1Q15648 1581 aaPredicted RBP19.47■□□□□ 0.71
TSC2-220ENST00000568238 CLTCL1P53675 1640 aa19.46■□□□□ 0.71
TSC2-220ENST00000568238 KIF1BO60333 1816 aa19.44■□□□□ 0.7
TSC2-220ENST00000568238 PROSER2Q86WR7 435 aaPredicted RBP19.44■□□□□ 0.7
TSC2-220ENST00000568238 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
TSC2-220ENST00000568238 NUTM2DQ5VT03 806 aaPredicted RBP19.42■□□□□ 0.7
TSC2-220ENST00000568238 ILDR2Q71H61 639 aa19.42■□□□□ 0.7
TSC2-220ENST00000568238 NRXN3Q9Y4C0 1643 aa19.41■□□□□ 0.7
TSC2-220ENST00000568238 ROBO1Q9Y6N7 1651 aa19.41■□□□□ 0.7
TSC2-220ENST00000568238 TBX22Q9Y458 520 aa19.41■□□□□ 0.7
TSC2-220ENST00000568238 RBM33Q96EV2 1170 aaKnown RBP19.4■□□□□ 0.7
TSC2-220ENST00000568238 MSH6P52701 1360 aa19.4■□□□□ 0.7
TSC2-220ENST00000568238 SETBP1Q9Y6X0 1596 aa19.4■□□□□ 0.7
TSC2-220ENST00000568238 PIK3R4Q99570 1358 aa19.39■□□□□ 0.69
TSC2-220ENST00000568238 FAM135BQ49AJ0 1406 aa19.38■□□□□ 0.69
TSC2-220ENST00000568238 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
TSC2-220ENST00000568238 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
TSC2-220ENST00000568238 ZNF326Q5BKZ1 582 aaKnown RBP19.36■□□□□ 0.69
TSC2-220ENST00000568238 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
TSC2-220ENST00000568238 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
TSC2-220ENST00000568238 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.33■□□□□ 0.68
TSC2-220ENST00000568238 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
TSC2-220ENST00000568238 PTPRUQ92729 1446 aa19.31■□□□□ 0.68
TSC2-220ENST00000568238 SOCS7O14512 581 aa19.3■□□□□ 0.68
TSC2-220ENST00000568238 C14orf37Q86TY3 774 aa19.3■□□□□ 0.68
TSC2-220ENST00000568238 PHLPP1O60346 1717 aa19.3■□□□□ 0.68
TSC2-220ENST00000568238 PPLO60437 1756 aa19.29■□□□□ 0.68
TSC2-220ENST00000568238 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
TSC2-220ENST00000568238 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
TSC2-220ENST00000568238 AMOTL2Q9Y2J4 779 aa19.27■□□□□ 0.68
TSC2-220ENST00000568238 SETD1AO15047 1707 aaKnown RBP19.27■□□□□ 0.68
TSC2-220ENST00000568238 METP08581 1390 aa19.25■□□□□ 0.67
TSC2-220ENST00000568238 CADPS2Q86UW7 1296 aa19.24■□□□□ 0.67
TSC2-220ENST00000568238 C19orf44Q9H6X5 657 aa19.24■□□□□ 0.67
TSC2-220ENST00000568238 DCCP43146 1447 aa19.24■□□□□ 0.67
TSC2-220ENST00000568238 COL16A1Q07092 1604 aaPredicted RBP19.23■□□□□ 0.67
TSC2-220ENST00000568238 ATF3P18847 181 aa19.23■□□□□ 0.67
TSC2-220ENST00000568238 NALCNQ8IZF0 1738 aa19.22■□□□□ 0.67
TSC2-220ENST00000568238 CCDC144AA2RUR9 1427 aa19.22■□□□□ 0.67
TSC2-220ENST00000568238 FOXD1Q16676 465 aa19.21■□□□□ 0.67
TSC2-220ENST00000568238 AHDC1Q5TGY3 1603 aaPredicted RBP19.21■□□□□ 0.67
TSC2-220ENST00000568238 RPGRIP1LQ68CZ1 1315 aa19.21■□□□□ 0.67
TSC2-220ENST00000568238 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
TSC2-220ENST00000568238 VGFO15240 615 aaPredicted RBP19.2■□□□□ 0.66
TSC2-220ENST00000568238 PTCH1Q13635 1447 aa19.18■□□□□ 0.66
TSC2-220ENST00000568238 ADGRL3Q9HAR2 1447 aa19.18■□□□□ 0.66
TSC2-220ENST00000568238 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
TSC2-220ENST00000568238 MPHOSPH9Q99550 1183 aa19.17■□□□□ 0.66
TSC2-220ENST00000568238 JCADQ9P266 1359 aa19.17■□□□□ 0.66
TSC2-220ENST00000568238 ACIN1Q9UKV3 1341 aaKnown RBP19.16■□□□□ 0.66
TSC2-220ENST00000568238 SPATA31E1Q6ZUB1 1445 aa19.16■□□□□ 0.66
TSC2-220ENST00000568238 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
TSC2-220ENST00000568238 ASXL1Q8IXJ9 1541 aa19.15■□□□□ 0.66
TSC2-220ENST00000568238 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
TSC2-220ENST00000568238 MST1RQ04912 1400 aa19.15■□□□□ 0.66
TSC2-220ENST00000568238 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.66
TSC2-220ENST00000568238 BRINP3Q76B58 766 aa19.12■□□□□ 0.65
TSC2-220ENST00000568238 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
TSC2-220ENST00000568238 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
TSC2-220ENST00000568238 ANKRD30BQ9BXX2 1392 aa19.1■□□□□ 0.65
TSC2-220ENST00000568238 RGL3Q3MIN7 710 aa19.09■□□□□ 0.65
TSC2-220ENST00000568238 RGS17Q9UGC6 210 aaPredicted RBP19.09■□□□□ 0.65
TSC2-220ENST00000568238 KNDC1Q76NI1 1749 aa19.08■□□□□ 0.65
TSC2-220ENST00000568238 ADGRF5Q8IZF2 1346 aa19.07■□□□□ 0.64
TSC2-220ENST00000568238 PIK3C2GO75747 1445 aa19.07■□□□□ 0.64
TSC2-220ENST00000568238 LRP6O75581 1613 aa19.07■□□□□ 0.64
TSC2-220ENST00000568238 SPATA31A6Q5VVP1 1343 aa19.05■□□□□ 0.64
TSC2-220ENST00000568238 CDC42BPGQ6DT37 1551 aa19.05■□□□□ 0.64
TSC2-220ENST00000568238 C1orf167Q5SNV9 1468 aa19.04■□□□□ 0.64
TSC2-220ENST00000568238 LAMC1P11047 1609 aa19.04■□□□□ 0.64
TSC2-220ENST00000568238 TECPR2O15040 1411 aa19.04■□□□□ 0.64
TSC2-220ENST00000568238 MYOM2P54296 1465 aa19.03■□□□□ 0.64
TSC2-220ENST00000568238 LRPPRCP42704 1394 aaKnown RBP19■□□□□ 0.63
TSC2-220ENST00000568238 NRXN1Q9ULB1 1477 aa19■□□□□ 0.63
TSC2-220ENST00000568238 MEX3CQ5U5Q3 659 aaKnown RBP18.99■□□□□ 0.63
TSC2-220ENST00000568238 POTEAQ6S8J7 498 aa18.99■□□□□ 0.63
TSC2-220ENST00000568238 STK26Q9P289 416 aa18.97■□□□□ 0.63
TSC2-220ENST00000568238 YTHDC2Q9H6S0 1430 aaKnown RBP18.97■□□□□ 0.63
TSC2-220ENST00000568238 ABCC11Q96J66 1382 aa18.96■□□□□ 0.63
TSC2-220ENST00000568238 DDX17Q92841 729 aaKnown RBP18.96■□□□□ 0.63
TSC2-220ENST00000568238 LRRC59Q96AG4 307 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms