RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SCAF11Q99590 1463 aaKnown RBP19.25■□□□□ 0.67
CNOT1-213ENST00000568158 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
CNOT1-213ENST00000568158 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
CNOT1-213ENST00000568158 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
CNOT1-213ENST00000568158 CERKQ8TCT0 537 aa19.23■□□□□ 0.67
CNOT1-213ENST00000568158 RIMS2Q9UQ26 1411 aa19.23■□□□□ 0.67
CNOT1-213ENST00000568158 BCANQ96GW7 911 aa19.22■□□□□ 0.67
CNOT1-213ENST00000568158 CLTCL1P53675 1640 aa19.22■□□□□ 0.67
CNOT1-213ENST00000568158 TRPM2O94759 1503 aa19.21■□□□□ 0.67
CNOT1-213ENST00000568158 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
CNOT1-213ENST00000568158 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.2■□□□□ 0.66
CNOT1-213ENST00000568158 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
CNOT1-213ENST00000568158 ZFYVE9O95405 1425 aa19.19■□□□□ 0.66
CNOT1-213ENST00000568158 IQGAP1P46940 1657 aa19.19■□□□□ 0.66
CNOT1-213ENST00000568158 LTBP4Q8N2S1 1624 aa19.17■□□□□ 0.66
CNOT1-213ENST00000568158 KIF1BO60333 1816 aa19.16■□□□□ 0.66
CNOT1-213ENST00000568158 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
CNOT1-213ENST00000568158 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.65
CNOT1-213ENST00000568158 PLEKHG1Q9ULL1 1385 aa19.13■□□□□ 0.65
CNOT1-213ENST00000568158 ANKRD30BQ9BXX2 1392 aa19.11■□□□□ 0.65
CNOT1-213ENST00000568158 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
CNOT1-213ENST00000568158 RPGRIP1LQ68CZ1 1315 aa19.09■□□□□ 0.65
CNOT1-213ENST00000568158 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
CNOT1-213ENST00000568158 VGFO15240 615 aaPredicted RBP19.08■□□□□ 0.64
CNOT1-213ENST00000568158 STRCP1A6NGW2 1772 aa19.08■□□□□ 0.64
CNOT1-213ENST00000568158 NEXMIFQ5QGS0 1516 aa19.07■□□□□ 0.64
CNOT1-213ENST00000568158 KCNA6P17658 529 aa19.07■□□□□ 0.64
CNOT1-213ENST00000568158 FBXO41Q8TF61 875 aa19.07■□□□□ 0.64
CNOT1-213ENST00000568158 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
CNOT1-213ENST00000568158 ADAMTS13Q76LX8 1427 aa19.06■□□□□ 0.64
CNOT1-213ENST00000568158 RBM33Q96EV2 1170 aaKnown RBP19.03■□□□□ 0.64
CNOT1-213ENST00000568158 CPS1P31327 1500 aa19.03■□□□□ 0.64
CNOT1-213ENST00000568158 ADGRF5Q8IZF2 1346 aa19.02■□□□□ 0.64
CNOT1-213ENST00000568158 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
CNOT1-213ENST00000568158 PCGF6Q9BYE7 350 aa19.01■□□□□ 0.63
CNOT1-213ENST00000568158 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
CNOT1-213ENST00000568158 AMOTL2Q9Y2J4 779 aa19■□□□□ 0.63
CNOT1-213ENST00000568158 PPLO60437 1756 aa19■□□□□ 0.63
CNOT1-213ENST00000568158 CHD2O14647 1828 aaKnown RBP18.99■□□□□ 0.63
CNOT1-213ENST00000568158 NRXN3Q9Y4C0 1643 aa18.99■□□□□ 0.63
CNOT1-213ENST00000568158 METP08581 1390 aa18.98■□□□□ 0.63
CNOT1-213ENST00000568158 UBAP1LF5GYI3 381 aa18.98■□□□□ 0.63
CNOT1-213ENST00000568158 KDM2AQ9Y2K7 1162 aa18.98■□□□□ 0.63
CNOT1-213ENST00000568158 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
CNOT1-213ENST00000568158 PTPRUQ92729 1446 aa18.97■□□□□ 0.63
CNOT1-213ENST00000568158 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
CNOT1-213ENST00000568158 IQSEC2Q5JU85 1478 aa18.97■□□□□ 0.63
CNOT1-213ENST00000568158 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
CNOT1-213ENST00000568158 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
CNOT1-213ENST00000568158 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
CNOT1-213ENST00000568158 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
CNOT1-213ENST00000568158 DIP2AQ14689 1571 aa18.94■□□□□ 0.62
CNOT1-213ENST00000568158 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
CNOT1-213ENST00000568158 IFT172Q9UG01 1749 aa18.93■□□□□ 0.62
CNOT1-213ENST00000568158 XIRP1Q702N8 1843 aaKnown RBP18.93■□□□□ 0.62
CNOT1-213ENST00000568158 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
CNOT1-213ENST00000568158 TOM1O60784 492 aa18.92■□□□□ 0.62
CNOT1-213ENST00000568158 NWD1Q149M9 1564 aa18.91■□□□□ 0.62
CNOT1-213ENST00000568158 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
CNOT1-213ENST00000568158 TMEM132EQ6IEE7 984 aa18.91■□□□□ 0.62
CNOT1-213ENST00000568158 PIP4K2BP78356 416 aa18.9■□□□□ 0.62
CNOT1-213ENST00000568158 C14orf93Q9H972 538 aaKnown RBP18.89■□□□□ 0.61
CNOT1-213ENST00000568158 STK26Q9P289 416 aa18.88■□□□□ 0.61
CNOT1-213ENST00000568158 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
CNOT1-213ENST00000568158 NKTRP30414 1462 aaKnown RBP18.88■□□□□ 0.61
CNOT1-213ENST00000568158 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
CNOT1-213ENST00000568158 C14orf37Q86TY3 774 aa18.87■□□□□ 0.61
CNOT1-213ENST00000568158 PIK3C2GO75747 1445 aa18.86■□□□□ 0.61
CNOT1-213ENST00000568158 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
CNOT1-213ENST00000568158 MYOM2P54296 1465 aa18.84■□□□□ 0.61
CNOT1-213ENST00000568158 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
CNOT1-213ENST00000568158 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
CNOT1-213ENST00000568158 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.6
CNOT1-213ENST00000568158 C19orf44Q9H6X5 657 aa18.82■□□□□ 0.6
CNOT1-213ENST00000568158 MSH6P52701 1360 aa18.81■□□□□ 0.6
CNOT1-213ENST00000568158 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
CNOT1-213ENST00000568158 WAPLQ7Z5K2 1190 aa18.81■□□□□ 0.6
CNOT1-213ENST00000568158 NCOA3Q9Y6Q9 1424 aa18.81■□□□□ 0.6
CNOT1-213ENST00000568158 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
CNOT1-213ENST00000568158 LRPPRCP42704 1394 aaKnown RBP18.79■□□□□ 0.6
CNOT1-213ENST00000568158 ATF3P18847 181 aa18.78■□□□□ 0.6
CNOT1-213ENST00000568158 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
CNOT1-213ENST00000568158 ABCC11Q96J66 1382 aa18.78■□□□□ 0.6
CNOT1-213ENST00000568158 YTHDC2Q9H6S0 1430 aaKnown RBP18.77■□□□□ 0.6
CNOT1-213ENST00000568158 HSPA1LP34931 641 aa18.76■□□□□ 0.59
CNOT1-213ENST00000568158 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.76■□□□□ 0.59
CNOT1-213ENST00000568158 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
CNOT1-213ENST00000568158 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
CNOT1-213ENST00000568158 TRAK1Q9UPV9 953 aa18.75■□□□□ 0.59
CNOT1-213ENST00000568158 PLEKHH1Q9ULM0 1364 aa18.74■□□□□ 0.59
CNOT1-213ENST00000568158 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
CNOT1-213ENST00000568158 SIRT1Q96EB6 747 aa18.73■□□□□ 0.59
CNOT1-213ENST00000568158 SAFB2Q14151 953 aaKnown RBP eCLIP18.72■□□□□ 0.59
CNOT1-213ENST00000568158 LAMC1P11047 1609 aa18.71■□□□□ 0.59
CNOT1-213ENST00000568158 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
CNOT1-213ENST00000568158 TECPR2O15040 1411 aa18.71■□□□□ 0.59
CNOT1-213ENST00000568158 FAM135BQ49AJ0 1406 aa18.71■□□□□ 0.59
CNOT1-213ENST00000568158 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
CNOT1-213ENST00000568158 ADGRB1O14514 1584 aa18.7■□□□□ 0.58
CNOT1-213ENST00000568158 NBPF8Q3BBV2 869 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms