RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 CPS1P31327 1500 aa18.39■□□□□ 0.54
FANCA-229ENST00000567988 STAG3Q9UJ98 1225 aa18.39■□□□□ 0.53
FANCA-229ENST00000567988 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
FANCA-229ENST00000567988 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
FANCA-229ENST00000567988 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
FANCA-229ENST00000567988 NEXMIFQ5QGS0 1516 aa18.38■□□□□ 0.53
FANCA-229ENST00000567988 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
FANCA-229ENST00000567988 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
FANCA-229ENST00000567988 FOXD1Q16676 465 aa18.35■□□□□ 0.53
FANCA-229ENST00000567988 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
FANCA-229ENST00000567988 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
FANCA-229ENST00000567988 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
FANCA-229ENST00000567988 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
FANCA-229ENST00000567988 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
FANCA-229ENST00000567988 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
FANCA-229ENST00000567988 KIF1BO60333 1816 aa18.31■□□□□ 0.52
FANCA-229ENST00000567988 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
FANCA-229ENST00000567988 CHGAP10645 457 aaKnown RBP18.29■□□□□ 0.52
FANCA-229ENST00000567988 TBX22Q9Y458 520 aa18.29■□□□□ 0.52
FANCA-229ENST00000567988 CCDC144AA2RUR9 1427 aa18.29■□□□□ 0.52
FANCA-229ENST00000567988 ANKRD30BQ9BXX2 1392 aa18.29■□□□□ 0.52
FANCA-229ENST00000567988 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
FANCA-229ENST00000567988 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
FANCA-229ENST00000567988 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.52
FANCA-229ENST00000567988 XIRP1Q702N8 1843 aaKnown RBP18.26■□□□□ 0.51
FANCA-229ENST00000567988 KCNA6P17658 529 aa18.26■□□□□ 0.51
FANCA-229ENST00000567988 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
FANCA-229ENST00000567988 CHD2O14647 1828 aaKnown RBP18.26■□□□□ 0.51
FANCA-229ENST00000567988 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
FANCA-229ENST00000567988 PPLO60437 1756 aa18.25■□□□□ 0.51
FANCA-229ENST00000567988 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
FANCA-229ENST00000567988 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
FANCA-229ENST00000567988 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
FANCA-229ENST00000567988 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
FANCA-229ENST00000567988 PPP1R15AO75807 674 aaPredicted RBP18.23■□□□□ 0.51
FANCA-229ENST00000567988 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
FANCA-229ENST00000567988 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
FANCA-229ENST00000567988 ZNF326Q5BKZ1 582 aaKnown RBP18.2■□□□□ 0.5
FANCA-229ENST00000567988 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
FANCA-229ENST00000567988 METP08581 1390 aa18.19■□□□□ 0.5
FANCA-229ENST00000567988 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
FANCA-229ENST00000567988 VGFO15240 615 aaPredicted RBP18.17■□□□□ 0.5
FANCA-229ENST00000567988 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
FANCA-229ENST00000567988 NCOA3Q9Y6Q9 1424 aa18.16■□□□□ 0.5
FANCA-229ENST00000567988 MYOM2P54296 1465 aa18.16■□□□□ 0.5
FANCA-229ENST00000567988 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
FANCA-229ENST00000567988 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
FANCA-229ENST00000567988 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
FANCA-229ENST00000567988 UBAP1LF5GYI3 381 aa18.13■□□□□ 0.49
FANCA-229ENST00000567988 BCANQ96GW7 911 aa18.12■□□□□ 0.49
FANCA-229ENST00000567988 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
FANCA-229ENST00000567988 AMOTL2Q9Y2J4 779 aa18.11■□□□□ 0.49
FANCA-229ENST00000567988 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
FANCA-229ENST00000567988 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
FANCA-229ENST00000567988 RGL3Q3MIN7 710 aa18.1■□□□□ 0.49
FANCA-229ENST00000567988 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
FANCA-229ENST00000567988 TECPR2O15040 1411 aa18.08■□□□□ 0.49
FANCA-229ENST00000567988 TOM1O60784 492 aa18.08■□□□□ 0.48
FANCA-229ENST00000567988 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
FANCA-229ENST00000567988 ROBO2Q9HCK4 1378 aa18.05■□□□□ 0.48
FANCA-229ENST00000567988 DCCP43146 1447 aa18.05■□□□□ 0.48
FANCA-229ENST00000567988 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
FANCA-229ENST00000567988 C14orf93Q9H972 538 aaKnown RBP18.04■□□□□ 0.48
FANCA-229ENST00000567988 ADGRB1O14514 1584 aa18.04■□□□□ 0.48
FANCA-229ENST00000567988 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
FANCA-229ENST00000567988 LAMC1P11047 1609 aa18.03■□□□□ 0.48
FANCA-229ENST00000567988 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
FANCA-229ENST00000567988 MSH6P52701 1360 aa18.03■□□□□ 0.48
FANCA-229ENST00000567988 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.48
FANCA-229ENST00000567988 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.47
FANCA-229ENST00000567988 ABCC11Q96J66 1382 aa18.02■□□□□ 0.47
FANCA-229ENST00000567988 NALCNQ8IZF0 1738 aa18.01■□□□□ 0.47
FANCA-229ENST00000567988 STAC3Q96MF2 364 aa18.01■□□□□ 0.47
FANCA-229ENST00000567988 C19orf44Q9H6X5 657 aa18■□□□□ 0.47
FANCA-229ENST00000567988 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
FANCA-229ENST00000567988 PIP4K2BP78356 416 aa17.98■□□□□ 0.47
FANCA-229ENST00000567988 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
FANCA-229ENST00000567988 HSPA1LP34931 641 aa17.97■□□□□ 0.47
FANCA-229ENST00000567988 CFAP70Q5T0N1 1121 aa17.97■□□□□ 0.47
FANCA-229ENST00000567988 MST1RQ04912 1400 aa17.97■□□□□ 0.47
FANCA-229ENST00000567988 DLC1Q96QB1 1528 aa17.95■□□□□ 0.46
FANCA-229ENST00000567988 TMEM132EQ6IEE7 984 aa17.95■□□□□ 0.46
FANCA-229ENST00000567988 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
FANCA-229ENST00000567988 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
FANCA-229ENST00000567988 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
FANCA-229ENST00000567988 CADPS2Q86UW7 1296 aa17.94■□□□□ 0.46
FANCA-229ENST00000567988 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
FANCA-229ENST00000567988 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
FANCA-229ENST00000567988 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
FANCA-229ENST00000567988 KIAA1210Q9ULL0 1709 aa17.92■□□□□ 0.46
FANCA-229ENST00000567988 AHDC1Q5TGY3 1603 aaPredicted RBP17.91■□□□□ 0.46
FANCA-229ENST00000567988 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
FANCA-229ENST00000567988 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
FANCA-229ENST00000567988 COL16A1Q07092 1604 aaPredicted RBP17.88■□□□□ 0.45
FANCA-229ENST00000567988 ATF3P18847 181 aa17.88■□□□□ 0.45
FANCA-229ENST00000567988 WAPLQ7Z5K2 1190 aa17.88■□□□□ 0.45
FANCA-229ENST00000567988 L3MBTL2Q969R5 705 aa17.88■□□□□ 0.45
FANCA-229ENST00000567988 KDM2AQ9Y2K7 1162 aa17.88■□□□□ 0.45
FANCA-229ENST00000567988 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
FANCA-229ENST00000567988 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms