RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 PLEKHG1Q9ULL1 1385 aa11.43□□□□□ -0.58
GINS3-207ENST00000567400 CLTCL1P53675 1640 aa11.43□□□□□ -0.58
GINS3-207ENST00000567400 SLC26A8Q96RN1 970 aa11.43□□□□□ -0.58
GINS3-207ENST00000567400 TRPM2O94759 1503 aa11.42□□□□□ -0.58
GINS3-207ENST00000567400 ADAMTS13Q76LX8 1427 aa11.42□□□□□ -0.58
GINS3-207ENST00000567400 PIP4K2BP78356 416 aa11.41□□□□□ -0.58
GINS3-207ENST00000567400 SENP3Q9H4L4 574 aaPredicted RBP11.41□□□□□ -0.58
GINS3-207ENST00000567400 NRXN3Q9Y4C0 1643 aa11.41□□□□□ -0.58
GINS3-207ENST00000567400 NKTRP30414 1462 aaKnown RBP11.4□□□□□ -0.58
GINS3-207ENST00000567400 TOM1O60784 492 aa11.4□□□□□ -0.58
GINS3-207ENST00000567400 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
GINS3-207ENST00000567400 CHGAP10645 457 aaKnown RBP11.39□□□□□ -0.59
GINS3-207ENST00000567400 KCNA6P17658 529 aa11.39□□□□□ -0.59
GINS3-207ENST00000567400 NUTM2DQ5VT03 806 aaPredicted RBP11.39□□□□□ -0.59
GINS3-207ENST00000567400 TMEM94Q12767 1356 aa11.39□□□□□ -0.59
GINS3-207ENST00000567400 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
GINS3-207ENST00000567400 DIP2AQ14689 1571 aa11.38□□□□□ -0.59
GINS3-207ENST00000567400 HSPA1LP34931 641 aa11.38□□□□□ -0.59
GINS3-207ENST00000567400 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
GINS3-207ENST00000567400 NEXMIFQ5QGS0 1516 aa11.38□□□□□ -0.59
GINS3-207ENST00000567400 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
GINS3-207ENST00000567400 PPP1R15AO75807 674 aaPredicted RBP11.37□□□□□ -0.59
GINS3-207ENST00000567400 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
GINS3-207ENST00000567400 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
GINS3-207ENST00000567400 TBX22Q9Y458 520 aa11.35□□□□□ -0.59
GINS3-207ENST00000567400 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
GINS3-207ENST00000567400 HDGFP51858 240 aaKnown RBP11.34□□□□□ -0.59
GINS3-207ENST00000567400 TRIM52Q96A61 297 aa11.34□□□□□ -0.59
GINS3-207ENST00000567400 BCANQ96GW7 911 aa11.34□□□□□ -0.59
GINS3-207ENST00000567400 SLC4A1APQ9BWU0 796 aaKnown RBP11.34□□□□□ -0.59
GINS3-207ENST00000567400 KIF1BO60333 1816 aa11.34□□□□□ -0.59
GINS3-207ENST00000567400 XRN1Q8IZH2 1706 aaKnown RBP11.34□□□□□ -0.59
GINS3-207ENST00000567400 FOXD1Q16676 465 aa11.33□□□□□ -0.6
GINS3-207ENST00000567400 PROSER2Q86WR7 435 aaPredicted RBP11.33□□□□□ -0.6
GINS3-207ENST00000567400 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
GINS3-207ENST00000567400 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
GINS3-207ENST00000567400 ILDR2Q71H61 639 aa11.32□□□□□ -0.6
GINS3-207ENST00000567400 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
GINS3-207ENST00000567400 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
GINS3-207ENST00000567400 METP08581 1390 aa11.31□□□□□ -0.6
GINS3-207ENST00000567400 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
GINS3-207ENST00000567400 PPLO60437 1756 aa11.31□□□□□ -0.6
GINS3-207ENST00000567400 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
GINS3-207ENST00000567400 MSH6P52701 1360 aa11.29□□□□□ -0.6
GINS3-207ENST00000567400 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
GINS3-207ENST00000567400 NCOA3Q9Y6Q9 1424 aa11.29□□□□□ -0.6
GINS3-207ENST00000567400 SPATA31E1Q6ZUB1 1445 aa11.28□□□□□ -0.6
GINS3-207ENST00000567400 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
GINS3-207ENST00000567400 MPHOSPH9Q99550 1183 aa11.28□□□□□ -0.6
GINS3-207ENST00000567400 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
GINS3-207ENST00000567400 IFT172Q9UG01 1749 aa11.27□□□□□ -0.61
GINS3-207ENST00000567400 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.61
GINS3-207ENST00000567400 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
GINS3-207ENST00000567400 SLAIN2Q9P270 581 aa11.25□□□□□ -0.61
GINS3-207ENST00000567400 NALCNQ8IZF0 1738 aa11.25□□□□□ -0.61
GINS3-207ENST00000567400 PRAG1Q86YV5 1406 aa11.25□□□□□ -0.61
GINS3-207ENST00000567400 RPGRIP1LQ68CZ1 1315 aa11.24□□□□□ -0.61
GINS3-207ENST00000567400 DCCP43146 1447 aa11.24□□□□□ -0.61
GINS3-207ENST00000567400 COL16A1Q07092 1604 aaPredicted RBP11.24□□□□□ -0.61
GINS3-207ENST00000567400 VGFO15240 615 aaPredicted RBP11.23□□□□□ -0.61
GINS3-207ENST00000567400 C19orf44Q9H6X5 657 aa11.23□□□□□ -0.61
GINS3-207ENST00000567400 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
GINS3-207ENST00000567400 ASXL1Q8IXJ9 1541 aa11.23□□□□□ -0.61
GINS3-207ENST00000567400 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
GINS3-207ENST00000567400 ADGRF5Q8IZF2 1346 aa11.22□□□□□ -0.61
GINS3-207ENST00000567400 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
GINS3-207ENST00000567400 ROBO2Q9HCK4 1378 aa11.22□□□□□ -0.61
GINS3-207ENST00000567400 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.61
GINS3-207ENST00000567400 MST1RQ04912 1400 aa11.21□□□□□ -0.61
GINS3-207ENST00000567400 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
GINS3-207ENST00000567400 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
GINS3-207ENST00000567400 PIK3C2GO75747 1445 aa11.2□□□□□ -0.62
GINS3-207ENST00000567400 RGL3Q3MIN7 710 aa11.2□□□□□ -0.62
GINS3-207ENST00000567400 ANKRD30BQ9BXX2 1392 aa11.19□□□□□ -0.62
GINS3-207ENST00000567400 ATF3P18847 181 aa11.19□□□□□ -0.62
GINS3-207ENST00000567400 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
GINS3-207ENST00000567400 NRXN1Q9ULB1 1477 aa11.19□□□□□ -0.62
GINS3-207ENST00000567400 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
GINS3-207ENST00000567400 RGS17Q9UGC6 210 aaPredicted RBP11.18□□□□□ -0.62
GINS3-207ENST00000567400 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
GINS3-207ENST00000567400 MYOM2P54296 1465 aa11.17□□□□□ -0.62
GINS3-207ENST00000567400 TECPR2O15040 1411 aa11.17□□□□□ -0.62
GINS3-207ENST00000567400 KNDC1Q76NI1 1749 aa11.16□□□□□ -0.62
GINS3-207ENST00000567400 SOCS7O14512 581 aa11.16□□□□□ -0.62
GINS3-207ENST00000567400 LRP6O75581 1613 aa11.16□□□□□ -0.62
GINS3-207ENST00000567400 JCADQ9P266 1359 aa11.16□□□□□ -0.62
GINS3-207ENST00000567400 SHPRHQ149N8 1683 aa11.15□□□□□ -0.62
GINS3-207ENST00000567400 LAMC1P11047 1609 aa11.15□□□□□ -0.62
GINS3-207ENST00000567400 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
GINS3-207ENST00000567400 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
GINS3-207ENST00000567400 HRCP23327 699 aa11.14□□□□□ -0.63
GINS3-207ENST00000567400 LRPPRCP42704 1394 aaKnown RBP11.14□□□□□ -0.63
GINS3-207ENST00000567400 PLEKHH1Q9ULM0 1364 aa11.14□□□□□ -0.63
GINS3-207ENST00000567400 TMEM132EQ6IEE7 984 aa11.13□□□□□ -0.63
GINS3-207ENST00000567400 DDX17Q92841 729 aaKnown RBP11.13□□□□□ -0.63
GINS3-207ENST00000567400 PHF23Q9BUL5 403 aaPredicted RBP11.13□□□□□ -0.63
GINS3-207ENST00000567400 ABCC11Q96J66 1382 aa11.13□□□□□ -0.63
GINS3-207ENST00000567400 ADGRB1O14514 1584 aa11.12□□□□□ -0.63
GINS3-207ENST00000567400 YTHDC2Q9H6S0 1430 aaKnown RBP11.12□□□□□ -0.63
GINS3-207ENST00000567400 C14orf93Q9H972 538 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms