RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-231ENST00000566279 STRCQ7RTU9 1775 aa14.34□□□□□ -0.11
TCF4-231ENST00000566279 CENPBP07199 599 aaPredicted RBP14.33□□□□□ -0.11
TCF4-231ENST00000566279 NCKAP5LQ9HCH0 1330 aa14.32□□□□□ -0.12
TCF4-231ENST00000566279 KDM5AP29375 1690 aaKnown RBP14.32□□□□□ -0.12
TCF4-231ENST00000566279 POLR1AO95602 1720 aaPredicted RBP14.31□□□□□ -0.12
TCF4-231ENST00000566279 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
TCF4-231ENST00000566279 RGL3Q3MIN7 710 aa14.31□□□□□ -0.12
TCF4-231ENST00000566279 NBPF8Q3BBV2 869 aa14.3□□□□□ -0.12
TCF4-231ENST00000566279 THEMISQ8N1K5 641 aaPredicted RBP14.3□□□□□ -0.12
TCF4-231ENST00000566279 YTHDC1Q96MU7 727 aaKnown RBP14.3□□□□□ -0.12
TCF4-231ENST00000566279 LTKP29376 864 aa14.3□□□□□ -0.12
TCF4-231ENST00000566279 ZNF326Q5BKZ1 582 aaKnown RBP14.3□□□□□ -0.12
TCF4-231ENST00000566279 TMEM2Q9UHN6 1383 aa14.29□□□□□ -0.12
TCF4-231ENST00000566279 NEURL4Q96JN8 1562 aa14.29□□□□□ -0.12
TCF4-231ENST00000566279 SLIT1O75093 1534 aa14.29□□□□□ -0.12
TCF4-231ENST00000566279 HSPA5P11021 654 aaKnown RBP14.28□□□□□ -0.12
TCF4-231ENST00000566279 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
TCF4-231ENST00000566279 SPATA31E1Q6ZUB1 1445 aa14.27□□□□□ -0.12
TCF4-231ENST00000566279 RIMS2Q9UQ26 1411 aa14.27□□□□□ -0.12
TCF4-231ENST00000566279 NEXMIFQ5QGS0 1516 aa14.27□□□□□ -0.12
TCF4-231ENST00000566279 ZFYVE9O95405 1425 aa14.27□□□□□ -0.13
TCF4-231ENST00000566279 TXNDC2Q86VQ3 553 aa14.26□□□□□ -0.13
TCF4-231ENST00000566279 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
TCF4-231ENST00000566279 SCAF11Q99590 1463 aaKnown RBP14.26□□□□□ -0.13
TCF4-231ENST00000566279 PPLO60437 1756 aa14.25□□□□□ -0.13
TCF4-231ENST00000566279 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.132e-7■■■■■ 31.9
TCF4-231ENST00000566279 IFT172Q9UG01 1749 aa14.25□□□□□ -0.13
TCF4-231ENST00000566279 ANKLE2Q86XL3 938 aa14.24□□□□□ -0.13
TCF4-231ENST00000566279 IQGAP1P46940 1657 aa14.24□□□□□ -0.13
TCF4-231ENST00000566279 EID1Q9Y6B2 187 aa14.22□□□□□ -0.13
TCF4-231ENST00000566279 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
TCF4-231ENST00000566279 WASHC2AQ641Q2 1341 aa14.21□□□□□ -0.13
TCF4-231ENST00000566279 BCANQ96GW7 911 aa14.21□□□□□ -0.13
TCF4-231ENST00000566279 SLC26A8Q96RN1 970 aa14.2□□□□□ -0.14
TCF4-231ENST00000566279 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
TCF4-231ENST00000566279 NRXN3Q9Y4C0 1643 aa14.2□□□□□ -0.14
TCF4-231ENST00000566279 ADGRF5Q8IZF2 1346 aa14.2□□□□□ -0.14
TCF4-231ENST00000566279 MED14O60244 1454 aa14.19□□□□□ -0.14
TCF4-231ENST00000566279 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
TCF4-231ENST00000566279 DCAF11Q8TEB1 546 aa14.18□□□□□ -0.14
TCF4-231ENST00000566279 PLEKHG1Q9ULL1 1385 aa14.17□□□□□ -0.14
TCF4-231ENST00000566279 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.16□□□□□ -0.14
TCF4-231ENST00000566279 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
TCF4-231ENST00000566279 C11orf95C9JLR9 678 aaPredicted RBP14.15□□□□□ -0.14
TCF4-231ENST00000566279 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
TCF4-231ENST00000566279 RPGRIP1LQ68CZ1 1315 aa14.15□□□□□ -0.14
TCF4-231ENST00000566279 ANP32CO43423 234 aa14.15□□□□□ -0.14
TCF4-231ENST00000566279 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.15
TCF4-231ENST00000566279 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.15
TCF4-231ENST00000566279 USP47Q96K76 1375 aa14.14□□□□□ -0.15
TCF4-231ENST00000566279 HDGFP51858 240 aaKnown RBP14.14□□□□□ -0.15
TCF4-231ENST00000566279 SETBP1Q9Y6X0 1596 aa14.14□□□□□ -0.15
TCF4-231ENST00000566279 SETD1AO15047 1707 aaKnown RBP14.14□□□□□ -0.15
TCF4-231ENST00000566279 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
TCF4-231ENST00000566279 MYOM2P54296 1465 aa14.13□□□□□ -0.15
TCF4-231ENST00000566279 PIK3C2GO75747 1445 aa14.12□□□□□ -0.15
TCF4-231ENST00000566279 CCER2I3L3R5 266 aa14.12□□□□□ -0.15
TCF4-231ENST00000566279 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
TCF4-231ENST00000566279 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
TCF4-231ENST00000566279 PRAG1Q86YV5 1406 aa14.11□□□□□ -0.15
TCF4-231ENST00000566279 METP08581 1390 aa14.11□□□□□ -0.15
TCF4-231ENST00000566279 TRPM1Q7Z4N2 1603 aa14.11□□□□□ -0.15
TCF4-231ENST00000566279 NRXN1Q9ULB1 1477 aa14.11□□□□□ -0.15
TCF4-231ENST00000566279 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
TCF4-231ENST00000566279 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
TCF4-231ENST00000566279 CFAP70Q5T0N1 1121 aa14.1□□□□□ -0.15
TCF4-231ENST00000566279 ASXL1Q8IXJ9 1541 aa14.1□□□□□ -0.15
TCF4-231ENST00000566279 TMEM132EQ6IEE7 984 aa14.09□□□□□ -0.15
TCF4-231ENST00000566279 RBM33Q96EV2 1170 aaKnown RBP14.09□□□□□ -0.15
TCF4-231ENST00000566279 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
TCF4-231ENST00000566279 DIP2AQ14689 1571 aa14.08□□□□□ -0.16
TCF4-231ENST00000566279 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.16
TCF4-231ENST00000566279 CARD11Q9BXL7 1154 aa14.07□□□□□ -0.16
TCF4-231ENST00000566279 LTBP4Q8N2S1 1624 aa14.07□□□□□ -0.16
TCF4-231ENST00000566279 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
TCF4-231ENST00000566279 LAMC1P11047 1609 aa14.06□□□□□ -0.16
TCF4-231ENST00000566279 ROCK2O75116 1388 aaKnown RBP14.05□□□□□ -0.16
TCF4-231ENST00000566279 KCNA6P17658 529 aa14.05□□□□□ -0.16
TCF4-231ENST00000566279 STK26Q9P289 416 aa14.05□□□□□ -0.16
TCF4-231ENST00000566279 NWD1Q149M9 1564 aa14.04□□□□□ -0.16
TCF4-231ENST00000566279 XRN1Q8IZH2 1706 aaKnown RBP14.04□□□□□ -0.16
TCF4-231ENST00000566279 MYT1Q01538 1121 aa14.04□□□□□ -0.16
TCF4-231ENST00000566279 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
TCF4-231ENST00000566279 C14orf93Q9H972 538 aaKnown RBP14.04□□□□□ -0.16
TCF4-231ENST00000566279 GPRASP1Q5JY77 1395 aa14.04□□□□□ -0.16
TCF4-231ENST00000566279 AMOTL2Q9Y2J4 779 aa14.03□□□□□ -0.16
TCF4-231ENST00000566279 ADGRB1O14514 1584 aa14.03□□□□□ -0.16
TCF4-231ENST00000566279 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
TCF4-231ENST00000566279 ST20-MTHFSA0A0A6YYL1 179 aa14□□□□□ -0.17
TCF4-231ENST00000566279 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
TCF4-231ENST00000566279 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
TCF4-231ENST00000566279 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
TCF4-231ENST00000566279 ROBO2Q9HCK4 1378 aa13.99□□□□□ -0.17
TCF4-231ENST00000566279 PIK3R4Q99570 1358 aa13.99□□□□□ -0.17
TCF4-231ENST00000566279 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
TCF4-231ENST00000566279 CPS1P31327 1500 aa13.99□□□□□ -0.17
TCF4-231ENST00000566279 PROSER2Q86WR7 435 aaPredicted RBP13.98□□□□□ -0.17
TCF4-231ENST00000566279 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
TCF4-231ENST00000566279 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
TCF4-231ENST00000566279 NKTRP30414 1462 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms