RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 BCANQ96GW7 911 aa26.83■■□□□ 1.89
TRADD-205ENST00000566247 CLTCL1P53675 1640 aa26.83■■□□□ 1.88
TRADD-205ENST00000566247 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.82■■□□□ 1.88
TRADD-205ENST00000566247 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
TRADD-205ENST00000566247 ZNF326Q5BKZ1 582 aaKnown RBP26.81■■□□□ 1.88
TRADD-205ENST00000566247 NUTM2DQ5VT03 806 aaPredicted RBP26.77■■□□□ 1.88
TRADD-205ENST00000566247 SENP3Q9H4L4 574 aaPredicted RBP26.77■■□□□ 1.88
TRADD-205ENST00000566247 HRCP23327 699 aa26.76■■□□□ 1.87
TRADD-205ENST00000566247 FBXO41Q8TF61 875 aa26.76■■□□□ 1.87
TRADD-205ENST00000566247 PLEKHG1Q9ULL1 1385 aa26.75■■□□□ 1.87
TRADD-205ENST00000566247 CPS1P31327 1500 aa26.75■■□□□ 1.87
TRADD-205ENST00000566247 ILDR1Q86SU0 546 aaPredicted RBP26.74■■□□□ 1.87
TRADD-205ENST00000566247 SLC26A8Q96RN1 970 aa26.74■■□□□ 1.87
TRADD-205ENST00000566247 CCDC144AA2RUR9 1427 aa26.73■■□□□ 1.87
TRADD-205ENST00000566247 KIF1BO60333 1816 aa26.73■■□□□ 1.87
TRADD-205ENST00000566247 IQSEC2Q5JU85 1478 aa26.7■■□□□ 1.87
TRADD-205ENST00000566247 NEXMIFQ5QGS0 1516 aa26.65■■□□□ 1.86
TRADD-205ENST00000566247 STRCP1A6NGW2 1772 aa26.62■■□□□ 1.85
TRADD-205ENST00000566247 RPGRIP1LQ68CZ1 1315 aa26.62■■□□□ 1.85
TRADD-205ENST00000566247 KCNA6P17658 529 aa26.61■■□□□ 1.85
TRADD-205ENST00000566247 TBX22Q9Y458 520 aa26.61■■□□□ 1.85
TRADD-205ENST00000566247 DIP2AQ14689 1571 aa26.6■■□□□ 1.85
TRADD-205ENST00000566247 ADAMTS13Q76LX8 1427 aa26.6■■□□□ 1.85
TRADD-205ENST00000566247 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
TRADD-205ENST00000566247 RGL3Q3MIN7 710 aa26.59■■□□□ 1.85
TRADD-205ENST00000566247 LRRC7Q96NW7 1537 aa26.59■■□□□ 1.85
TRADD-205ENST00000566247 VGFO15240 615 aaPredicted RBP26.58■■□□□ 1.85
TRADD-205ENST00000566247 UBAP1LF5GYI3 381 aa26.57■■□□□ 1.84
TRADD-205ENST00000566247 ANKRD30BQ9BXX2 1392 aa26.56■■□□□ 1.84
TRADD-205ENST00000566247 SPATA31E1Q6ZUB1 1445 aa26.56■■□□□ 1.84
TRADD-205ENST00000566247 SETBP1Q9Y6X0 1596 aa26.55■■□□□ 1.84
TRADD-205ENST00000566247 NWD1Q149M9 1564 aa26.54■■□□□ 1.84
TRADD-205ENST00000566247 NKTRP30414 1462 aaKnown RBP26.53■■□□□ 1.84
TRADD-205ENST00000566247 PROSER2Q86WR7 435 aaPredicted RBP26.52■■□□□ 1.84
TRADD-205ENST00000566247 PIK3R4Q99570 1358 aa26.52■■□□□ 1.84
TRADD-205ENST00000566247 NRXN3Q9Y4C0 1643 aa26.52■■□□□ 1.84
TRADD-205ENST00000566247 PPLO60437 1756 aa26.51■■□□□ 1.83
TRADD-205ENST00000566247 TMEM94Q12767 1356 aa26.49■■□□□ 1.83
TRADD-205ENST00000566247 TOM1O60784 492 aa26.49■■□□□ 1.83
TRADD-205ENST00000566247 CHD2O14647 1828 aaKnown RBP26.48■■□□□ 1.83
TRADD-205ENST00000566247 SCAF1Q9H7N4 1312 aaKnown RBP26.46■■□□□ 1.83
TRADD-205ENST00000566247 RBM33Q96EV2 1170 aaKnown RBP26.46■■□□□ 1.83
TRADD-205ENST00000566247 AMOTL2Q9Y2J4 779 aa26.45■■□□□ 1.82
TRADD-205ENST00000566247 METP08581 1390 aa26.45■■□□□ 1.82
TRADD-205ENST00000566247 ADGRF5Q8IZF2 1346 aa26.44■■□□□ 1.82
TRADD-205ENST00000566247 PTPRUQ92729 1446 aa26.43■■□□□ 1.82
TRADD-205ENST00000566247 PIP4K2BP78356 416 aa26.43■■□□□ 1.82
TRADD-205ENST00000566247 IFT172Q9UG01 1749 aa26.42■■□□□ 1.82
TRADD-205ENST00000566247 ALKQ9UM73 1620 aa26.41■■□□□ 1.82
TRADD-205ENST00000566247 XIRP1Q702N8 1843 aaKnown RBP26.4■■□□□ 1.82
TRADD-205ENST00000566247 C14orf37Q86TY3 774 aa26.4■■□□□ 1.82
TRADD-205ENST00000566247 MSH6P52701 1360 aa26.38■■□□□ 1.81
TRADD-205ENST00000566247 XRN1Q8IZH2 1706 aaKnown RBP26.36■■□□□ 1.81
TRADD-205ENST00000566247 MYOM2P54296 1465 aa26.36■■□□□ 1.81
TRADD-205ENST00000566247 PIK3C2GO75747 1445 aa26.35■■□□□ 1.81
TRADD-205ENST00000566247 SETD1AO15047 1707 aaKnown RBP26.34■■□□□ 1.81
TRADD-205ENST00000566247 NCOA3Q9Y6Q9 1424 aa26.34■■□□□ 1.81
TRADD-205ENST00000566247 DCAF11Q8TEB1 546 aa26.32■■□□□ 1.8
TRADD-205ENST00000566247 KDM2AQ9Y2K7 1162 aa26.32■■□□□ 1.8
TRADD-205ENST00000566247 DHX57Q6P158 1386 aaKnown RBP26.3■■□□□ 1.8
TRADD-205ENST00000566247 NRXN1Q9ULB1 1477 aa26.3■■□□□ 1.8
TRADD-205ENST00000566247 PTCH1Q13635 1447 aa26.27■■□□□ 1.8
TRADD-205ENST00000566247 STAC3Q96MF2 364 aa26.26■■□□□ 1.79
TRADD-205ENST00000566247 C19orf44Q9H6X5 657 aa26.26■■□□□ 1.79
TRADD-205ENST00000566247 ATF3P18847 181 aa26.25■■□□□ 1.79
TRADD-205ENST00000566247 CFAP70Q5T0N1 1121 aa26.25■■□□□ 1.79
TRADD-205ENST00000566247 TMEM132EQ6IEE7 984 aa26.25■■□□□ 1.79
TRADD-205ENST00000566247 C14orf93Q9H972 538 aaKnown RBP26.25■■□□□ 1.79
TRADD-205ENST00000566247 STK26Q9P289 416 aa26.25■■□□□ 1.79
TRADD-205ENST00000566247 LAMC1P11047 1609 aa26.25■■□□□ 1.79
TRADD-205ENST00000566247 ROBO2Q9HCK4 1378 aa26.23■■□□□ 1.79
TRADD-205ENST00000566247 CADPS2Q86UW7 1296 aa26.23■■□□□ 1.79
TRADD-205ENST00000566247 ASXL1Q8IXJ9 1541 aa26.23■■□□□ 1.79
TRADD-205ENST00000566247 PRAG1Q86YV5 1406 aa26.22■■□□□ 1.79
TRADD-205ENST00000566247 LRPPRCP42704 1394 aaKnown RBP26.22■■□□□ 1.79
TRADD-205ENST00000566247 HSPA1LP34931 641 aa26.21■■□□□ 1.79
TRADD-205ENST00000566247 NEUROD1Q13562 356 aa26.21■■□□□ 1.79
TRADD-205ENST00000566247 SIN3AQ96ST3 1273 aa26.21■■□□□ 1.79
TRADD-205ENST00000566247 SLAIN2Q9P270 581 aa26.21■■□□□ 1.79
TRADD-205ENST00000566247 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.21■■□□□ 1.79
TRADD-205ENST00000566247 ADGRL3Q9HAR2 1447 aa26.2■■□□□ 1.78
TRADD-205ENST00000566247 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
TRADD-205ENST00000566247 DCCP43146 1447 aa26.19■■□□□ 1.78
TRADD-205ENST00000566247 YTHDC2Q9H6S0 1430 aaKnown RBP26.19■■□□□ 1.78
TRADD-205ENST00000566247 FAM135BQ49AJ0 1406 aa26.18■■□□□ 1.78
TRADD-205ENST00000566247 ABCC11Q96J66 1382 aa26.18■■□□□ 1.78
TRADD-205ENST00000566247 TECPR2O15040 1411 aa26.17■■□□□ 1.78
TRADD-205ENST00000566247 NALCNQ8IZF0 1738 aa26.14■■□□□ 1.78
TRADD-205ENST00000566247 ROBO1Q9Y6N7 1651 aa26.14■■□□□ 1.78
TRADD-205ENST00000566247 KNDC1Q76NI1 1749 aa26.14■■□□□ 1.77
TRADD-205ENST00000566247 WAPLQ7Z5K2 1190 aa26.11■■□□□ 1.77
TRADD-205ENST00000566247 L3MBTL2Q969R5 705 aa26.11■■□□□ 1.77
TRADD-205ENST00000566247 ADGRB1O14514 1584 aa26.09■■□□□ 1.77
TRADD-205ENST00000566247 MST1RQ04912 1400 aa26.08■■□□□ 1.77
TRADD-205ENST00000566247 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
TRADD-205ENST00000566247 SIRT1Q96EB6 747 aa26.07■■□□□ 1.76
TRADD-205ENST00000566247 TRAK1Q9UPV9 953 aa26.06■■□□□ 1.76
TRADD-205ENST00000566247 PRAM1Q96QH2 718 aa26.05■■□□□ 1.76
TRADD-205ENST00000566247 POGKQ9P215 609 aa26.05■■□□□ 1.76
TRADD-205ENST00000566247 DLC1Q96QB1 1528 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms