RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 SCAF1Q9H7N4 1312 aaKnown RBP30.12■■■□□ 2.41
TRADD-204ENST00000566104 PLEKHG1Q9ULL1 1385 aa30.12■■■□□ 2.41
TRADD-204ENST00000566104 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
TRADD-204ENST00000566104 CHGAP10645 457 aaKnown RBP30.11■■■□□ 2.41
TRADD-204ENST00000566104 NWD1Q149M9 1564 aa30.11■■■□□ 2.41
TRADD-204ENST00000566104 ALKQ9UM73 1620 aa30.1■■■□□ 2.41
TRADD-204ENST00000566104 PIP4K2BP78356 416 aa30.09■■■□□ 2.41
TRADD-204ENST00000566104 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.09■■■□□ 2.41
TRADD-204ENST00000566104 BCANQ96GW7 911 aa30.08■■■□□ 2.41
TRADD-204ENST00000566104 NKTRP30414 1462 aaKnown RBP30.07■■■□□ 2.4
TRADD-204ENST00000566104 SLC26A8Q96RN1 970 aa30.07■■■□□ 2.4
TRADD-204ENST00000566104 DIP2AQ14689 1571 aa30.06■■■□□ 2.4
TRADD-204ENST00000566104 KCNA6P17658 529 aa30.05■■■□□ 2.4
TRADD-204ENST00000566104 CHD2O14647 1828 aaKnown RBP30.05■■■□□ 2.4
TRADD-204ENST00000566104 TRPM2O94759 1503 aa30.04■■■□□ 2.4
TRADD-204ENST00000566104 KIF1BO60333 1816 aa30.02■■■□□ 2.4
TRADD-204ENST00000566104 CLTCL1P53675 1640 aa30■■■□□ 2.39
TRADD-204ENST00000566104 DISP3Q9P2K9 1392 aa29.99■■■□□ 2.39
TRADD-204ENST00000566104 TRIM52Q96A61 297 aa29.97■■■□□ 2.39
TRADD-204ENST00000566104 TMEM94Q12767 1356 aa29.97■■■□□ 2.39
TRADD-204ENST00000566104 HSPA1LP34931 641 aa29.95■■■□□ 2.39
TRADD-204ENST00000566104 PROSER2Q86WR7 435 aaPredicted RBP29.94■■■□□ 2.38
TRADD-204ENST00000566104 TBX22Q9Y458 520 aa29.94■■■□□ 2.38
TRADD-204ENST00000566104 ADAMTS13Q76LX8 1427 aa29.93■■■□□ 2.38
TRADD-204ENST00000566104 PIK3R4Q99570 1358 aa29.92■■■□□ 2.38
TRADD-204ENST00000566104 SENP3Q9H4L4 574 aaPredicted RBP29.92■■■□□ 2.38
TRADD-204ENST00000566104 NUTM2DQ5VT03 806 aaPredicted RBP29.91■■■□□ 2.38
TRADD-204ENST00000566104 SETBP1Q9Y6X0 1596 aa29.9■■■□□ 2.38
TRADD-204ENST00000566104 ZNF326Q5BKZ1 582 aaKnown RBP29.89■■■□□ 2.38
TRADD-204ENST00000566104 SLC4A1APQ9BWU0 796 aaKnown RBP29.89■■■□□ 2.38
TRADD-204ENST00000566104 NEXMIFQ5QGS0 1516 aa29.87■■■□□ 2.37
TRADD-204ENST00000566104 NRXN3Q9Y4C0 1643 aa29.87■■■□□ 2.37
TRADD-204ENST00000566104 MSH6P52701 1360 aa29.87■■■□□ 2.37
TRADD-204ENST00000566104 NCOA3Q9Y6Q9 1424 aa29.83■■■□□ 2.37
TRADD-204ENST00000566104 MED1Q15648 1581 aaPredicted RBP29.81■■■□□ 2.36
TRADD-204ENST00000566104 FAM135BQ49AJ0 1406 aa29.81■■■□□ 2.36
TRADD-204ENST00000566104 ACIN1Q9UKV3 1341 aaKnown RBP29.81■■■□□ 2.36
TRADD-204ENST00000566104 ROBO1Q9Y6N7 1651 aa29.81■■■□□ 2.36
TRADD-204ENST00000566104 RBM33Q96EV2 1170 aaKnown RBP29.79■■■□□ 2.36
TRADD-204ENST00000566104 XRN1Q8IZH2 1706 aaKnown RBP29.79■■■□□ 2.36
TRADD-204ENST00000566104 PPLO60437 1756 aa29.76■■■□□ 2.35
TRADD-204ENST00000566104 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.74■■■□□ 2.35
TRADD-204ENST00000566104 PTPRUQ92729 1446 aa29.72■■■□□ 2.35
TRADD-204ENST00000566104 C14orf37Q86TY3 774 aa29.72■■■□□ 2.35
TRADD-204ENST00000566104 CCDC144AA2RUR9 1427 aa29.71■■■□□ 2.35
TRADD-204ENST00000566104 AMOTL2Q9Y2J4 779 aa29.71■■■□□ 2.35
TRADD-204ENST00000566104 SETD5Q9C0A6 1442 aa29.71■■■□□ 2.35
TRADD-204ENST00000566104 RPGRIP1LQ68CZ1 1315 aa29.71■■■□□ 2.35
TRADD-204ENST00000566104 VGFO15240 615 aaPredicted RBP29.69■■■□□ 2.34
TRADD-204ENST00000566104 SETD1AO15047 1707 aaKnown RBP29.68■■■□□ 2.34
TRADD-204ENST00000566104 MPHOSPH9Q99550 1183 aa29.68■■■□□ 2.34
TRADD-204ENST00000566104 SLAIN2Q9P270 581 aa29.66■■■□□ 2.34
TRADD-204ENST00000566104 METP08581 1390 aa29.65■■■□□ 2.34
TRADD-204ENST00000566104 PHLPP1O60346 1717 aa29.65■■■□□ 2.34
TRADD-204ENST00000566104 FOXD1Q16676 465 aa29.65■■■□□ 2.34
TRADD-204ENST00000566104 ILDR2Q71H61 639 aa29.65■■■□□ 2.34
TRADD-204ENST00000566104 C19orf44Q9H6X5 657 aa29.65■■■□□ 2.34
TRADD-204ENST00000566104 DCCP43146 1447 aa29.64■■■□□ 2.34
TRADD-204ENST00000566104 CADPS2Q86UW7 1296 aa29.64■■■□□ 2.34
TRADD-204ENST00000566104 IFT172Q9UG01 1749 aa29.63■■■□□ 2.33
TRADD-204ENST00000566104 ATF3P18847 181 aa29.62■■■□□ 2.33
TRADD-204ENST00000566104 RAB3GAP2Q9H2M9 1393 aa29.58■■■□□ 2.33
TRADD-204ENST00000566104 NALCNQ8IZF0 1738 aa29.57■■■□□ 2.32
TRADD-204ENST00000566104 SPATA31E1Q6ZUB1 1445 aa29.57■■■□□ 2.32
TRADD-204ENST00000566104 PHF23Q9BUL5 403 aaPredicted RBP29.57■■■□□ 2.32
TRADD-204ENST00000566104 PTCH1Q13635 1447 aa29.56■■■□□ 2.32
TRADD-204ENST00000566104 ADGRL3Q9HAR2 1447 aa29.54■■■□□ 2.32
TRADD-204ENST00000566104 PRAG1Q86YV5 1406 aa29.54■■■□□ 2.32
TRADD-204ENST00000566104 ANKRD30BQ9BXX2 1392 aa29.53■■■□□ 2.32
TRADD-204ENST00000566104 COL16A1Q07092 1604 aaPredicted RBP29.53■■■□□ 2.32
TRADD-204ENST00000566104 AHDC1Q5TGY3 1603 aaPredicted RBP29.53■■■□□ 2.32
TRADD-204ENST00000566104 SOCS7O14512 581 aa29.49■■■□□ 2.31
TRADD-204ENST00000566104 RGL3Q3MIN7 710 aa29.48■■■□□ 2.31
TRADD-204ENST00000566104 MST1RQ04912 1400 aa29.46■■■□□ 2.31
TRADD-204ENST00000566104 JCADQ9P266 1359 aa29.46■■■□□ 2.31
TRADD-204ENST00000566104 ASXL1Q8IXJ9 1541 aa29.45■■■□□ 2.3
TRADD-204ENST00000566104 ADGRF5Q8IZF2 1346 aa29.44■■■□□ 2.3
TRADD-204ENST00000566104 NHSL1Q5SYE7 1610 aa29.43■■■□□ 2.3
TRADD-204ENST00000566104 SHPRHQ149N8 1683 aa29.43■■■□□ 2.3
TRADD-204ENST00000566104 KNDC1Q76NI1 1749 aa29.42■■■□□ 2.3
TRADD-204ENST00000566104 LAMC1P11047 1609 aa29.42■■■□□ 2.3
TRADD-204ENST00000566104 ROBO2Q9HCK4 1378 aa29.42■■■□□ 2.3
TRADD-204ENST00000566104 PIK3C2GO75747 1445 aa29.42■■■□□ 2.3
TRADD-204ENST00000566104 BRINP3Q76B58 766 aa29.41■■■□□ 2.3
TRADD-204ENST00000566104 HRCP23327 699 aa29.39■■■□□ 2.3
TRADD-204ENST00000566104 MYOM2P54296 1465 aa29.39■■■□□ 2.3
TRADD-204ENST00000566104 TECPR2O15040 1411 aa29.36■■■□□ 2.29
TRADD-204ENST00000566104 CDC42BPGQ6DT37 1551 aa29.35■■■□□ 2.29
TRADD-204ENST00000566104 NRXN1Q9ULB1 1477 aa29.34■■■□□ 2.29
TRADD-204ENST00000566104 SPATA31A6Q5VVP1 1343 aa29.33■■■□□ 2.29
TRADD-204ENST00000566104 C1orf167Q5SNV9 1468 aa29.32■■■□□ 2.28
TRADD-204ENST00000566104 LRPPRCP42704 1394 aaKnown RBP29.32■■■□□ 2.28
TRADD-204ENST00000566104 ABCC11Q96J66 1382 aa29.28■■■□□ 2.28
TRADD-204ENST00000566104 YTHDC2Q9H6S0 1430 aaKnown RBP29.27■■■□□ 2.28
TRADD-204ENST00000566104 RGS17Q9UGC6 210 aaPredicted RBP29.26■■■□□ 2.27
TRADD-204ENST00000566104 STK26Q9P289 416 aa29.25■■■□□ 2.27
TRADD-204ENST00000566104 C14orf93Q9H972 538 aaKnown RBP29.24■■■□□ 2.27
TRADD-204ENST00000566104 LRP6O75581 1613 aa29.23■■■□□ 2.27
TRADD-204ENST00000566104 TMEM132EQ6IEE7 984 aa29.23■■■□□ 2.27
TRADD-204ENST00000566104 LRRC59Q96AG4 307 aaKnown RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms