RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
SPG7-211ENST00000565370 TRIM52Q96A61 297 aa18.43■□□□□ 0.54
SPG7-211ENST00000565370 HDGFP51858 240 aaKnown RBP18.42■□□□□ 0.54
SPG7-211ENST00000565370 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
SPG7-211ENST00000565370 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.4■□□□□ 0.54
SPG7-211ENST00000565370 CLTCL1P53675 1640 aa18.4■□□□□ 0.54
SPG7-211ENST00000565370 PLEKHG1Q9ULL1 1385 aa18.4■□□□□ 0.54
SPG7-211ENST00000565370 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
SPG7-211ENST00000565370 DIP2AQ14689 1571 aa18.38■□□□□ 0.53
SPG7-211ENST00000565370 KIF1BO60333 1816 aa18.38■□□□□ 0.53
SPG7-211ENST00000565370 BCANQ96GW7 911 aa18.38■□□□□ 0.53
SPG7-211ENST00000565370 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
SPG7-211ENST00000565370 NWD1Q149M9 1564 aa18.37■□□□□ 0.53
SPG7-211ENST00000565370 HSPA1LP34931 641 aa18.36■□□□□ 0.53
SPG7-211ENST00000565370 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
SPG7-211ENST00000565370 NKTRP30414 1462 aaKnown RBP18.35■□□□□ 0.53
SPG7-211ENST00000565370 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
SPG7-211ENST00000565370 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
SPG7-211ENST00000565370 PIP4K2BP78356 416 aa18.33■□□□□ 0.52
SPG7-211ENST00000565370 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
SPG7-211ENST00000565370 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
SPG7-211ENST00000565370 SLC26A8Q96RN1 970 aa18.32■□□□□ 0.52
SPG7-211ENST00000565370 TOM1O60784 492 aa18.31■□□□□ 0.52
SPG7-211ENST00000565370 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
SPG7-211ENST00000565370 NEXMIFQ5QGS0 1516 aa18.29■□□□□ 0.52
SPG7-211ENST00000565370 KCNA6P17658 529 aa18.28■□□□□ 0.52
SPG7-211ENST00000565370 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
SPG7-211ENST00000565370 CHD2O14647 1828 aaKnown RBP18.28■□□□□ 0.52
SPG7-211ENST00000565370 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
SPG7-211ENST00000565370 PIK3R4Q99570 1358 aa18.27■□□□□ 0.51
SPG7-211ENST00000565370 ADAMTS13Q76LX8 1427 aa18.26■□□□□ 0.51
SPG7-211ENST00000565370 NUTM2DQ5VT03 806 aaPredicted RBP18.26■□□□□ 0.51
SPG7-211ENST00000565370 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
SPG7-211ENST00000565370 ALKQ9UM73 1620 aa18.25■□□□□ 0.51
SPG7-211ENST00000565370 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
SPG7-211ENST00000565370 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
SPG7-211ENST00000565370 TBX22Q9Y458 520 aa18.24■□□□□ 0.51
SPG7-211ENST00000565370 TMEM94Q12767 1356 aa18.24■□□□□ 0.51
SPG7-211ENST00000565370 MPHOSPH9Q99550 1183 aa18.23■□□□□ 0.51
SPG7-211ENST00000565370 PPLO60437 1756 aa18.22■□□□□ 0.51
SPG7-211ENST00000565370 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
SPG7-211ENST00000565370 MSH6P52701 1360 aa18.2■□□□□ 0.5
SPG7-211ENST00000565370 FOXD1Q16676 465 aa18.2■□□□□ 0.5
SPG7-211ENST00000565370 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
SPG7-211ENST00000565370 RPGRIP1LQ68CZ1 1315 aa18.2■□□□□ 0.5
SPG7-211ENST00000565370 NCOA3Q9Y6Q9 1424 aa18.17■□□□□ 0.5
SPG7-211ENST00000565370 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
SPG7-211ENST00000565370 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
SPG7-211ENST00000565370 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
SPG7-211ENST00000565370 C14orf37Q86TY3 774 aa18.14■□□□□ 0.49
SPG7-211ENST00000565370 SETD1AO15047 1707 aaKnown RBP18.14■□□□□ 0.49
SPG7-211ENST00000565370 SPATA31E1Q6ZUB1 1445 aa18.14■□□□□ 0.49
SPG7-211ENST00000565370 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
SPG7-211ENST00000565370 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
SPG7-211ENST00000565370 ROBO1Q9Y6N7 1651 aa18.12■□□□□ 0.49
SPG7-211ENST00000565370 HRCP23327 699 aa18.11■□□□□ 0.49
SPG7-211ENST00000565370 AMOTL2Q9Y2J4 779 aa18.11■□□□□ 0.49
SPG7-211ENST00000565370 METP08581 1390 aa18.11■□□□□ 0.49
SPG7-211ENST00000565370 RBM33Q96EV2 1170 aaKnown RBP18.1■□□□□ 0.49
SPG7-211ENST00000565370 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
SPG7-211ENST00000565370 DCCP43146 1447 aa18.09■□□□□ 0.49
SPG7-211ENST00000565370 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
SPG7-211ENST00000565370 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
SPG7-211ENST00000565370 LAMC1P11047 1609 aa18.08■□□□□ 0.48
SPG7-211ENST00000565370 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
SPG7-211ENST00000565370 MYOM2P54296 1465 aa18.07■□□□□ 0.48
SPG7-211ENST00000565370 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
SPG7-211ENST00000565370 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
SPG7-211ENST00000565370 CADPS2Q86UW7 1296 aa18.05■□□□□ 0.48
SPG7-211ENST00000565370 NALCNQ8IZF0 1738 aa18.05■□□□□ 0.48
SPG7-211ENST00000565370 PIK3C2GO75747 1445 aa18.05■□□□□ 0.48
SPG7-211ENST00000565370 ADGRL3Q9HAR2 1447 aa18.05■□□□□ 0.48
SPG7-211ENST00000565370 ATF3P18847 181 aa18.04■□□□□ 0.48
SPG7-211ENST00000565370 C19orf44Q9H6X5 657 aa18.04■□□□□ 0.48
SPG7-211ENST00000565370 PHLPP1O60346 1717 aa18.02■□□□□ 0.48
SPG7-211ENST00000565370 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.48
SPG7-211ENST00000565370 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
SPG7-211ENST00000565370 SLAIN2Q9P270 581 aa18.01■□□□□ 0.47
SPG7-211ENST00000565370 NRXN1Q9ULB1 1477 aa18■□□□□ 0.47
SPG7-211ENST00000565370 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
SPG7-211ENST00000565370 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
SPG7-211ENST00000565370 TECPR2O15040 1411 aa17.98■□□□□ 0.47
SPG7-211ENST00000565370 ROBO2Q9HCK4 1378 aa17.97■□□□□ 0.47
SPG7-211ENST00000565370 CDC42BPGQ6DT37 1551 aa17.96■□□□□ 0.47
SPG7-211ENST00000565370 MST1RQ04912 1400 aa17.96■□□□□ 0.47
SPG7-211ENST00000565370 LRPPRCP42704 1394 aaKnown RBP17.95■□□□□ 0.46
SPG7-211ENST00000565370 COL16A1Q07092 1604 aaPredicted RBP17.94■□□□□ 0.46
SPG7-211ENST00000565370 YTHDC2Q9H6S0 1430 aaKnown RBP17.93■□□□□ 0.46
SPG7-211ENST00000565370 POTEAQ6S8J7 498 aa17.93■□□□□ 0.46
SPG7-211ENST00000565370 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
SPG7-211ENST00000565370 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
SPG7-211ENST00000565370 NHSL1Q5SYE7 1610 aa17.91■□□□□ 0.46
SPG7-211ENST00000565370 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
SPG7-211ENST00000565370 JCADQ9P266 1359 aa17.9■□□□□ 0.46
SPG7-211ENST00000565370 BRINP3Q76B58 766 aa17.89■□□□□ 0.45
SPG7-211ENST00000565370 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.45
SPG7-211ENST00000565370 STK26Q9P289 416 aa17.89■□□□□ 0.45
SPG7-211ENST00000565370 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
SPG7-211ENST00000565370 SHPRHQ149N8 1683 aa17.88■□□□□ 0.45
SPG7-211ENST00000565370 DCAF11Q8TEB1 546 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms