RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
NSMCE1-208ENST00000565070 THEMISQ8N1K5 641 aaPredicted RBP17.93■□□□□ 0.46
NSMCE1-208ENST00000565070 PPLO60437 1756 aa17.93■□□□□ 0.46
NSMCE1-208ENST00000565070 HDGFP51858 240 aaKnown RBP17.92■□□□□ 0.46
NSMCE1-208ENST00000565070 NEXMIFQ5QGS0 1516 aa17.9■□□□□ 0.46
NSMCE1-208ENST00000565070 MYOM2P54296 1465 aa17.9■□□□□ 0.46
NSMCE1-208ENST00000565070 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
NSMCE1-208ENST00000565070 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
NSMCE1-208ENST00000565070 TMEM2Q9UHN6 1383 aa17.89■□□□□ 0.46
NSMCE1-208ENST00000565070 SLIT1O75093 1534 aa17.89■□□□□ 0.45
NSMCE1-208ENST00000565070 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.89■□□□□ 0.45
NSMCE1-208ENST00000565070 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
NSMCE1-208ENST00000565070 VGFO15240 615 aaPredicted RBP17.88■□□□□ 0.45
NSMCE1-208ENST00000565070 ZFYVE9O95405 1425 aa17.88■□□□□ 0.45
NSMCE1-208ENST00000565070 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
NSMCE1-208ENST00000565070 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
NSMCE1-208ENST00000565070 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
NSMCE1-208ENST00000565070 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.45
NSMCE1-208ENST00000565070 NRXN1Q9ULB1 1477 aa17.83■□□□□ 0.45
NSMCE1-208ENST00000565070 PRAG1Q86YV5 1406 aa17.82■□□□□ 0.44
NSMCE1-208ENST00000565070 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
NSMCE1-208ENST00000565070 TXNDC2Q86VQ3 553 aa17.81■□□□□ 0.44
NSMCE1-208ENST00000565070 ANKLE2Q86XL3 938 aa17.81■□□□□ 0.44
NSMCE1-208ENST00000565070 POLR1AO95602 1720 aaPredicted RBP17.8■□□□□ 0.44
NSMCE1-208ENST00000565070 LAMC1P11047 1609 aa17.8■□□□□ 0.44
NSMCE1-208ENST00000565070 KIAA1210Q9ULL0 1709 aa17.8■□□□□ 0.44
NSMCE1-208ENST00000565070 PIK3C2GO75747 1445 aa17.8■□□□□ 0.44
NSMCE1-208ENST00000565070 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
NSMCE1-208ENST00000565070 ADGRF5Q8IZF2 1346 aa17.79■□□□□ 0.44
NSMCE1-208ENST00000565070 NUTM2DQ5VT03 806 aaPredicted RBP17.78■□□□□ 0.44
NSMCE1-208ENST00000565070 PLEKHG1Q9ULL1 1385 aa17.78■□□□□ 0.44
NSMCE1-208ENST00000565070 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
NSMCE1-208ENST00000565070 SETBP1Q9Y6X0 1596 aa17.77■□□□□ 0.44
NSMCE1-208ENST00000565070 LTKP29376 864 aa17.77■□□□□ 0.43
NSMCE1-208ENST00000565070 TRPM1Q7Z4N2 1603 aa17.77■□□□□ 0.43
NSMCE1-208ENST00000565070 CENPBP07199 599 aaPredicted RBP17.76■□□□□ 0.43
NSMCE1-208ENST00000565070 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
NSMCE1-208ENST00000565070 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
NSMCE1-208ENST00000565070 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
NSMCE1-208ENST00000565070 MED14O60244 1454 aa17.75■□□□□ 0.43
NSMCE1-208ENST00000565070 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
NSMCE1-208ENST00000565070 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
NSMCE1-208ENST00000565070 IQGAP1P46940 1657 aa17.73■□□□□ 0.43
NSMCE1-208ENST00000565070 BCANQ96GW7 911 aa17.73■□□□□ 0.43
NSMCE1-208ENST00000565070 C14orf93Q9H972 538 aaKnown RBP17.73■□□□□ 0.43
NSMCE1-208ENST00000565070 ALKQ9UM73 1620 aa17.72■□□□□ 0.43
NSMCE1-208ENST00000565070 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
NSMCE1-208ENST00000565070 HSPA2P54652 639 aa17.72■□□□□ 0.43
NSMCE1-208ENST00000565070 NPHP4O75161 1426 aaPredicted RBP17.72■□□□□ 0.43
NSMCE1-208ENST00000565070 ROCK2O75116 1388 aaKnown RBP17.71■□□□□ 0.42
NSMCE1-208ENST00000565070 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
NSMCE1-208ENST00000565070 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
NSMCE1-208ENST00000565070 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
NSMCE1-208ENST00000565070 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
NSMCE1-208ENST00000565070 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
NSMCE1-208ENST00000565070 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
NSMCE1-208ENST00000565070 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
NSMCE1-208ENST00000565070 WASHC2AQ641Q2 1341 aa17.67■□□□□ 0.42
NSMCE1-208ENST00000565070 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
NSMCE1-208ENST00000565070 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
NSMCE1-208ENST00000565070 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
NSMCE1-208ENST00000565070 PIK3R4Q99570 1358 aa17.65■□□□□ 0.42
NSMCE1-208ENST00000565070 NBPF1Q3BBV0 1214 aa17.65■□□□□ 0.42
NSMCE1-208ENST00000565070 USP47Q96K76 1375 aa17.64■□□□□ 0.41
NSMCE1-208ENST00000565070 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
NSMCE1-208ENST00000565070 SLC26A8Q96RN1 970 aa17.63■□□□□ 0.41
NSMCE1-208ENST00000565070 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
NSMCE1-208ENST00000565070 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
NSMCE1-208ENST00000565070 METP08581 1390 aa17.61■□□□□ 0.41
NSMCE1-208ENST00000565070 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
NSMCE1-208ENST00000565070 YTHDC2Q9H6S0 1430 aaKnown RBP17.61■□□□□ 0.41
NSMCE1-208ENST00000565070 LRPPRCP42704 1394 aaKnown RBP17.6■□□□□ 0.41
NSMCE1-208ENST00000565070 CCDC7Q96M83 1385 aa17.6■□□□□ 0.41
NSMCE1-208ENST00000565070 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
NSMCE1-208ENST00000565070 TMEM132EQ6IEE7 984 aa17.6■□□□□ 0.41
NSMCE1-208ENST00000565070 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
NSMCE1-208ENST00000565070 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
NSMCE1-208ENST00000565070 ANP32CO43423 234 aa17.58■□□□□ 0.41
NSMCE1-208ENST00000565070 ABCC11Q96J66 1382 aa17.58■□□□□ 0.4
NSMCE1-208ENST00000565070 DLC1Q96QB1 1528 aa17.58■□□□□ 0.4
NSMCE1-208ENST00000565070 CCER2I3L3R5 266 aa17.57■□□□□ 0.4
NSMCE1-208ENST00000565070 TECPR2O15040 1411 aa17.57■□□□□ 0.4
NSMCE1-208ENST00000565070 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
NSMCE1-208ENST00000565070 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
NSMCE1-208ENST00000565070 ARHGEF28Q8N1W1 1705 aaKnown RBP17.56■□□□□ 0.4
NSMCE1-208ENST00000565070 CPS1P31327 1500 aa17.56■□□□□ 0.4
NSMCE1-208ENST00000565070 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
NSMCE1-208ENST00000565070 SIRT1Q96EB6 747 aa17.54■□□□□ 0.4
NSMCE1-208ENST00000565070 STK26Q9P289 416 aa17.54■□□□□ 0.4
NSMCE1-208ENST00000565070 TRAK1Q9UPV9 953 aa17.54■□□□□ 0.4
NSMCE1-208ENST00000565070 KIF7Q2M1P5 1343 aa17.54■□□□□ 0.4
NSMCE1-208ENST00000565070 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
NSMCE1-208ENST00000565070 PTPRUQ92729 1446 aa17.54■□□□□ 0.4
NSMCE1-208ENST00000565070 AMOTL2Q9Y2J4 779 aa17.54■□□□□ 0.4
NSMCE1-208ENST00000565070 FAM135BQ49AJ0 1406 aa17.53■□□□□ 0.4
NSMCE1-208ENST00000565070 KCNA6P17658 529 aa17.53■□□□□ 0.4
NSMCE1-208ENST00000565070 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.39
NSMCE1-208ENST00000565070 SLC24A1O60721 1099 aa17.52■□□□□ 0.39
NSMCE1-208ENST00000565070 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.39
NSMCE1-208ENST00000565070 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms