RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PPARGC1BQ86YN6 1023 aaKnown RBP22.84■■□□□ 1.25
SPG7-210ENST00000564409 ZFYVE9O95405 1425 aa22.83■■□□□ 1.25
SPG7-210ENST00000564409 XIRP1Q702N8 1843 aaKnown RBP22.82■■□□□ 1.24
SPG7-210ENST00000564409 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.82■■□□□ 1.24
SPG7-210ENST00000564409 PLEKHG1Q9ULL1 1385 aa22.81■■□□□ 1.24
SPG7-210ENST00000564409 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
SPG7-210ENST00000564409 RIMS2Q9UQ26 1411 aa22.8■■□□□ 1.24
SPG7-210ENST00000564409 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
SPG7-210ENST00000564409 SOCS7O14512 581 aa22.78■■□□□ 1.24
SPG7-210ENST00000564409 PPP1R15AO75807 674 aaPredicted RBP22.78■■□□□ 1.24
SPG7-210ENST00000564409 NWD1Q149M9 1564 aa22.78■■□□□ 1.24
SPG7-210ENST00000564409 BCANQ96GW7 911 aa22.78■■□□□ 1.24
SPG7-210ENST00000564409 CHD2O14647 1828 aaKnown RBP22.75■■□□□ 1.23
SPG7-210ENST00000564409 TMEM94Q12767 1356 aa22.75■■□□□ 1.23
SPG7-210ENST00000564409 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
SPG7-210ENST00000564409 PROSER2Q86WR7 435 aaPredicted RBP22.74■■□□□ 1.23
SPG7-210ENST00000564409 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
SPG7-210ENST00000564409 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
SPG7-210ENST00000564409 DIP2AQ14689 1571 aa22.72■■□□□ 1.23
SPG7-210ENST00000564409 NAIPQ13075 1403 aa22.7■■□□□ 1.22
SPG7-210ENST00000564409 FAM135BQ49AJ0 1406 aa22.7■■□□□ 1.22
SPG7-210ENST00000564409 MED1Q15648 1581 aaPredicted RBP22.69■■□□□ 1.22
SPG7-210ENST00000564409 PIK3R4Q99570 1358 aa22.69■■□□□ 1.22
SPG7-210ENST00000564409 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
SPG7-210ENST00000564409 MSH6P52701 1360 aa22.66■■□□□ 1.22
SPG7-210ENST00000564409 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
SPG7-210ENST00000564409 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
SPG7-210ENST00000564409 TRPM2O94759 1503 aa22.62■■□□□ 1.21
SPG7-210ENST00000564409 KIF1BO60333 1816 aa22.6■■□□□ 1.21
SPG7-210ENST00000564409 NUTM2DQ5VT03 806 aaPredicted RBP22.6■■□□□ 1.21
SPG7-210ENST00000564409 SETBP1Q9Y6X0 1596 aa22.59■■□□□ 1.21
SPG7-210ENST00000564409 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.21
SPG7-210ENST00000564409 RBM33Q96EV2 1170 aaKnown RBP22.58■■□□□ 1.21
SPG7-210ENST00000564409 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.21
SPG7-210ENST00000564409 SLAIN2Q9P270 581 aa22.58■■□□□ 1.21
SPG7-210ENST00000564409 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
SPG7-210ENST00000564409 CLTCL1P53675 1640 aa22.57■■□□□ 1.2
SPG7-210ENST00000564409 TRIM52Q96A61 297 aa22.56■■□□□ 1.2
SPG7-210ENST00000564409 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
SPG7-210ENST00000564409 C19orf44Q9H6X5 657 aa22.54■■□□□ 1.2
SPG7-210ENST00000564409 NRXN3Q9Y4C0 1643 aa22.53■■□□□ 1.2
SPG7-210ENST00000564409 CADPS2Q86UW7 1296 aa22.53■■□□□ 1.2
SPG7-210ENST00000564409 AMOTL2Q9Y2J4 779 aa22.53■■□□□ 1.2
SPG7-210ENST00000564409 C14orf37Q86TY3 774 aa22.52■■□□□ 1.2
SPG7-210ENST00000564409 SLC4A1APQ9BWU0 796 aaKnown RBP22.52■■□□□ 1.2
SPG7-210ENST00000564409 ACIN1Q9UKV3 1341 aaKnown RBP22.52■■□□□ 1.2
SPG7-210ENST00000564409 NEXMIFQ5QGS0 1516 aa22.52■■□□□ 1.19
SPG7-210ENST00000564409 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
SPG7-210ENST00000564409 XRN1Q8IZH2 1706 aaKnown RBP22.5■■□□□ 1.19
SPG7-210ENST00000564409 ATF3P18847 181 aa22.49■■□□□ 1.19
SPG7-210ENST00000564409 RPGRIP1LQ68CZ1 1315 aa22.49■■□□□ 1.19
SPG7-210ENST00000564409 PTPRUQ92729 1446 aa22.48■■□□□ 1.19
SPG7-210ENST00000564409 VGFO15240 615 aaPredicted RBP22.48■■□□□ 1.19
SPG7-210ENST00000564409 DCCP43146 1447 aa22.48■■□□□ 1.19
SPG7-210ENST00000564409 PHLPP1O60346 1717 aa22.47■■□□□ 1.19
SPG7-210ENST00000564409 METP08581 1390 aa22.43■■□□□ 1.18
SPG7-210ENST00000564409 JCADQ9P266 1359 aa22.41■■□□□ 1.18
SPG7-210ENST00000564409 PPLO60437 1756 aa22.4■■□□□ 1.18
SPG7-210ENST00000564409 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.18
SPG7-210ENST00000564409 COL16A1Q07092 1604 aaPredicted RBP22.39■■□□□ 1.17
SPG7-210ENST00000564409 CCDC144AA2RUR9 1427 aa22.37■■□□□ 1.17
SPG7-210ENST00000564409 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
SPG7-210ENST00000564409 MPHOSPH9Q99550 1183 aa22.36■■□□□ 1.17
SPG7-210ENST00000564409 PRAG1Q86YV5 1406 aa22.36■■□□□ 1.17
SPG7-210ENST00000564409 ADGRL3Q9HAR2 1447 aa22.36■■□□□ 1.17
SPG7-210ENST00000564409 PTCH1Q13635 1447 aa22.34■■□□□ 1.17
SPG7-210ENST00000564409 RGS17Q9UGC6 210 aaPredicted RBP22.34■■□□□ 1.17
SPG7-210ENST00000564409 SPATA31A6Q5VVP1 1343 aa22.33■■□□□ 1.17
SPG7-210ENST00000564409 BRINP3Q76B58 766 aa22.33■■□□□ 1.17
SPG7-210ENST00000564409 MST1RQ04912 1400 aa22.32■■□□□ 1.16
SPG7-210ENST00000564409 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
SPG7-210ENST00000564409 SHPRHQ149N8 1683 aa22.31■■□□□ 1.16
SPG7-210ENST00000564409 ANKRD30BQ9BXX2 1392 aa22.31■■□□□ 1.16
SPG7-210ENST00000564409 FOXD1Q16676 465 aa22.31■■□□□ 1.16
SPG7-210ENST00000564409 NALCNQ8IZF0 1738 aa22.31■■□□□ 1.16
SPG7-210ENST00000564409 ASXL1Q8IXJ9 1541 aa22.3■■□□□ 1.16
SPG7-210ENST00000564409 SPATA31E1Q6ZUB1 1445 aa22.3■■□□□ 1.16
SPG7-210ENST00000564409 IFT172Q9UG01 1749 aa22.27■■□□□ 1.16
SPG7-210ENST00000564409 NHSL1Q5SYE7 1610 aa22.27■■□□□ 1.16
SPG7-210ENST00000564409 ROBO2Q9HCK4 1378 aa22.25■■□□□ 1.15
SPG7-210ENST00000564409 RGL3Q3MIN7 710 aa22.23■■□□□ 1.15
SPG7-210ENST00000564409 LRRC59Q96AG4 307 aaKnown RBP22.23■■□□□ 1.15
SPG7-210ENST00000564409 POTEAQ6S8J7 498 aa22.22■■□□□ 1.15
SPG7-210ENST00000564409 ADGRF5Q8IZF2 1346 aa22.22■■□□□ 1.15
SPG7-210ENST00000564409 C1orf167Q5SNV9 1468 aa22.22■■□□□ 1.15
SPG7-210ENST00000564409 MEX3CQ5U5Q3 659 aaKnown RBP22.2■■□□□ 1.14
SPG7-210ENST00000564409 LAMC1P11047 1609 aa22.2■■□□□ 1.14
SPG7-210ENST00000564409 TECPR2O15040 1411 aa22.19■■□□□ 1.14
SPG7-210ENST00000564409 LRP6O75581 1613 aa22.18■■□□□ 1.14
SPG7-210ENST00000564409 PIK3C2GO75747 1445 aa22.18■■□□□ 1.14
SPG7-210ENST00000564409 RAB3GAP2Q9H2M9 1393 aa22.18■■□□□ 1.14
SPG7-210ENST00000564409 ZNF772Q68DY9 489 aaPredicted RBP22.18■■□□□ 1.14
SPG7-210ENST00000564409 LRPPRCP42704 1394 aaKnown RBP22.17■■□□□ 1.14
SPG7-210ENST00000564409 ABCC11Q96J66 1382 aa22.17■■□□□ 1.14
SPG7-210ENST00000564409 HRCP23327 699 aa22.16■■□□□ 1.14
SPG7-210ENST00000564409 KNDC1Q76NI1 1749 aa22.16■■□□□ 1.14
SPG7-210ENST00000564409 CDC42BPGQ6DT37 1551 aa22.16■■□□□ 1.14
SPG7-210ENST00000564409 MYOM2P54296 1465 aa22.13■■□□□ 1.13
SPG7-210ENST00000564409 NRXN1Q9ULB1 1477 aa22.12■■□□□ 1.13
SPG7-210ENST00000564409 SIRT1Q96EB6 747 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms