RNA–Protein interactions for RNA: ENST00000564386.6

GCSH-203, Transcript of glycine cleavage system protein H, humanhuman

TSL 2

Gene GCSH, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-203ENST00000564386 FOXD1Q16676 465 aa31.94■■■□□ 2.7
GCSH-203ENST00000564386 ZNF335Q9H4Z2 1342 aaPredicted RBP31.93■■■□□ 2.7
GCSH-203ENST00000564386 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.91■■■□□ 2.7
GCSH-203ENST00000564386 PPP1R15AO75807 674 aaPredicted RBP31.9■■■□□ 2.7
GCSH-203ENST00000564386 CERKQ8TCT0 537 aa31.89■■■□□ 2.7
GCSH-203ENST00000564386 CCDC144AA2RUR9 1427 aa31.88■■■□□ 2.69
GCSH-203ENST00000564386 PLEKHG1Q9ULL1 1385 aa31.86■■■□□ 2.69
GCSH-203ENST00000564386 ZNF326Q5BKZ1 582 aaKnown RBP31.86■■■□□ 2.69
GCSH-203ENST00000564386 CPS1P31327 1500 aa31.84■■■□□ 2.69
GCSH-203ENST00000564386 STRCP1A6NGW2 1772 aa31.82■■■□□ 2.68
GCSH-203ENST00000564386 NEXMIFQ5QGS0 1516 aa31.82■■■□□ 2.68
GCSH-203ENST00000564386 IQSEC2Q5JU85 1478 aa31.81■■■□□ 2.68
GCSH-203ENST00000564386 TRIM26Q12899 539 aaPredicted RBP31.81■■■□□ 2.68
GCSH-203ENST00000564386 BCANQ96GW7 911 aa31.81■■■□□ 2.68
GCSH-203ENST00000564386 PPLO60437 1756 aa31.79■■■□□ 2.68
GCSH-203ENST00000564386 DIP2AQ14689 1571 aa31.78■■■□□ 2.68
GCSH-203ENST00000564386 NUTM2DQ5VT03 806 aaPredicted RBP31.78■■■□□ 2.68
GCSH-203ENST00000564386 SLC26A8Q96RN1 970 aa31.75■■■□□ 2.67
GCSH-203ENST00000564386 SETBP1Q9Y6X0 1596 aa31.73■■■□□ 2.67
GCSH-203ENST00000564386 SENP3Q9H4L4 574 aaPredicted RBP31.72■■■□□ 2.67
GCSH-203ENST00000564386 RPGRIP1LQ68CZ1 1315 aa31.72■■■□□ 2.67
GCSH-203ENST00000564386 CHD2O14647 1828 aaKnown RBP31.71■■■□□ 2.67
GCSH-203ENST00000564386 SPATA31E1Q6ZUB1 1445 aa31.71■■■□□ 2.67
GCSH-203ENST00000564386 IFT172Q9UG01 1749 aa31.71■■■□□ 2.67
GCSH-203ENST00000564386 NRXN3Q9Y4C0 1643 aa31.71■■■□□ 2.67
GCSH-203ENST00000564386 ANKRD30BQ9BXX2 1392 aa31.7■■■□□ 2.67
GCSH-203ENST00000564386 FBXO41Q8TF61 875 aa31.7■■■□□ 2.67
GCSH-203ENST00000564386 NWD1Q149M9 1564 aa31.69■■■□□ 2.66
GCSH-203ENST00000564386 ADAMTS13Q76LX8 1427 aa31.69■■■□□ 2.66
GCSH-203ENST00000564386 TBX22Q9Y458 520 aa31.67■■■□□ 2.66
GCSH-203ENST00000564386 VGFO15240 615 aaPredicted RBP31.65■■■□□ 2.66
GCSH-203ENST00000564386 LRRC7Q96NW7 1537 aa31.65■■■□□ 2.66
GCSH-203ENST00000564386 KCNA6P17658 529 aa31.63■■■□□ 2.65
GCSH-203ENST00000564386 RGL3Q3MIN7 710 aa31.63■■■□□ 2.65
GCSH-203ENST00000564386 NKTRP30414 1462 aaKnown RBP31.62■■■□□ 2.65
GCSH-203ENST00000564386 XIRP1Q702N8 1843 aaKnown RBP31.61■■■□□ 2.65
GCSH-203ENST00000564386 PIK3R4Q99570 1358 aa31.61■■■□□ 2.65
GCSH-203ENST00000564386 ILDR1Q86SU0 546 aaPredicted RBP31.61■■■□□ 2.65
GCSH-203ENST00000564386 SETD1AO15047 1707 aaKnown RBP31.58■■■□□ 2.65
GCSH-203ENST00000564386 ALKQ9UM73 1620 aa31.53■■■□□ 2.64
GCSH-203ENST00000564386 XRN1Q8IZH2 1706 aaKnown RBP31.52■■■□□ 2.64
GCSH-203ENST00000564386 PROSER2Q86WR7 435 aaPredicted RBP31.5■■■□□ 2.63
GCSH-203ENST00000564386 MYOM2P54296 1465 aa31.5■■■□□ 2.63
GCSH-203ENST00000564386 UBAP1LF5GYI3 381 aa31.48■■■□□ 2.63
GCSH-203ENST00000564386 PTPRUQ92729 1446 aa31.48■■■□□ 2.63
GCSH-203ENST00000564386 ADGRF5Q8IZF2 1346 aa31.48■■■□□ 2.63
GCSH-203ENST00000564386 METP08581 1390 aa31.47■■■□□ 2.63
GCSH-203ENST00000564386 TMEM94Q12767 1356 aa31.47■■■□□ 2.63
GCSH-203ENST00000564386 AMOTL2Q9Y2J4 779 aa31.45■■■□□ 2.63
GCSH-203ENST00000564386 PIK3C2GO75747 1445 aa31.44■■■□□ 2.62
GCSH-203ENST00000564386 DHX57Q6P158 1386 aaKnown RBP31.43■■■□□ 2.62
GCSH-203ENST00000564386 LAMC1P11047 1609 aa31.43■■■□□ 2.62
GCSH-203ENST00000564386 NRXN1Q9ULB1 1477 aa31.42■■■□□ 2.62
GCSH-203ENST00000564386 TOM1O60784 492 aa31.42■■■□□ 2.62
GCSH-203ENST00000564386 NCOA3Q9Y6Q9 1424 aa31.39■■■□□ 2.62
GCSH-203ENST00000564386 RBM33Q96EV2 1170 aaKnown RBP31.37■■■□□ 2.61
GCSH-203ENST00000564386 MSH6P52701 1360 aa31.35■■■□□ 2.61
GCSH-203ENST00000564386 STAC3Q96MF2 364 aa31.35■■■□□ 2.61
GCSH-203ENST00000564386 DCAF11Q8TEB1 546 aa31.34■■■□□ 2.61
GCSH-203ENST00000564386 PTCH1Q13635 1447 aa31.32■■■□□ 2.61
GCSH-203ENST00000564386 PRAG1Q86YV5 1406 aa31.32■■■□□ 2.61
GCSH-203ENST00000564386 ASXL1Q8IXJ9 1541 aa31.32■■■□□ 2.6
GCSH-203ENST00000564386 KNDC1Q76NI1 1749 aa31.32■■■□□ 2.6
GCSH-203ENST00000564386 C14orf37Q86TY3 774 aa31.31■■■□□ 2.6
GCSH-203ENST00000564386 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.31■■■□□ 2.6
GCSH-203ENST00000564386 SCAF1Q9H7N4 1312 aaKnown RBP31.3■■■□□ 2.6
GCSH-203ENST00000564386 KDM2AQ9Y2K7 1162 aa31.3■■■□□ 2.6
GCSH-203ENST00000564386 PIP4K2BP78356 416 aa31.29■■■□□ 2.6
GCSH-203ENST00000564386 PCGF6Q9BYE7 350 aa31.29■■■□□ 2.6
GCSH-203ENST00000564386 C14orf93Q9H972 538 aaKnown RBP31.28■■■□□ 2.6
GCSH-203ENST00000564386 NALCNQ8IZF0 1738 aa31.26■■■□□ 2.59
GCSH-203ENST00000564386 LRPPRCP42704 1394 aaKnown RBP31.25■■■□□ 2.59
GCSH-203ENST00000564386 CFAP70Q5T0N1 1121 aa31.24■■■□□ 2.59
GCSH-203ENST00000564386 SIN3AQ96ST3 1273 aa31.24■■■□□ 2.59
GCSH-203ENST00000564386 ROBO2Q9HCK4 1378 aa31.23■■■□□ 2.59
GCSH-203ENST00000564386 C19orf44Q9H6X5 657 aa31.23■■■□□ 2.59
GCSH-203ENST00000564386 TECPR2O15040 1411 aa31.23■■■□□ 2.59
GCSH-203ENST00000564386 TMEM132EQ6IEE7 984 aa31.22■■■□□ 2.59
GCSH-203ENST00000564386 YTHDC2Q9H6S0 1430 aaKnown RBP31.22■■■□□ 2.59
GCSH-203ENST00000564386 DCCP43146 1447 aa31.21■■■□□ 2.59
GCSH-203ENST00000564386 ADGRL3Q9HAR2 1447 aa31.21■■■□□ 2.59
GCSH-203ENST00000564386 KIAA1210Q9ULL0 1709 aa31.21■■■□□ 2.59
GCSH-203ENST00000564386 NEUROD1Q13562 356 aa31.2■■■□□ 2.59
GCSH-203ENST00000564386 ABCC11Q96J66 1382 aa31.19■■■□□ 2.58
GCSH-203ENST00000564386 STK26Q9P289 416 aa31.19■■■□□ 2.58
GCSH-203ENST00000564386 ATF3P18847 181 aa31.18■■■□□ 2.58
GCSH-203ENST00000564386 CADPS2Q86UW7 1296 aa31.18■■■□□ 2.58
GCSH-203ENST00000564386 ROBO1Q9Y6N7 1651 aa31.18■■■□□ 2.58
GCSH-203ENST00000564386 ADGRB1O14514 1584 aa31.17■■■□□ 2.58
GCSH-203ENST00000564386 FAM135BQ49AJ0 1406 aa31.14■■■□□ 2.58
GCSH-203ENST00000564386 L3MBTL2Q969R5 705 aa31.13■■■□□ 2.57
GCSH-203ENST00000564386 SLAIN2Q9P270 581 aa31.12■■■□□ 2.57
GCSH-203ENST00000564386 DLC1Q96QB1 1528 aa31.11■■■□□ 2.57
GCSH-203ENST00000564386 SIRT1Q96EB6 747 aa31.08■■■□□ 2.57
GCSH-203ENST00000564386 CDC42BPGQ6DT37 1551 aa31.07■■■□□ 2.56
GCSH-203ENST00000564386 HSPA1LP34931 641 aa31.06■■■□□ 2.56
GCSH-203ENST00000564386 WAPLQ7Z5K2 1190 aa31.05■■■□□ 2.56
GCSH-203ENST00000564386 MST1RQ04912 1400 aa31.05■■■□□ 2.56
GCSH-203ENST00000564386 TONSLQ96HA7 1378 aa31.05■■■□□ 2.56
GCSH-203ENST00000564386 ARHGEF28Q8N1W1 1705 aaKnown RBP31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms