RNA–Protein interactions for RNA: ENST00000563904.1

HERC2P4-201, Transcript of hect domain and RLD 2 pseudogene 4, humanhuman

TSL 5

Gene HERC2P4, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P4-201ENST00000563904 ALKQ9UM73 1620 aa23.89■■□□□ 1.42
HERC2P4-201ENST00000563904 SLC26A8Q96RN1 970 aa23.89■■□□□ 1.41
HERC2P4-201ENST00000563904 TOM1O60784 492 aa23.88■■□□□ 1.41
HERC2P4-201ENST00000563904 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
HERC2P4-201ENST00000563904 NWD1Q149M9 1564 aa23.86■■□□□ 1.41
HERC2P4-201ENST00000563904 TRPM2O94759 1503 aa23.86■■□□□ 1.41
HERC2P4-201ENST00000563904 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
HERC2P4-201ENST00000563904 BCANQ96GW7 911 aa23.85■■□□□ 1.41
HERC2P4-201ENST00000563904 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
HERC2P4-201ENST00000563904 PIP4K2BP78356 416 aa23.84■■□□□ 1.41
HERC2P4-201ENST00000563904 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.84■■□□□ 1.41
HERC2P4-201ENST00000563904 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
HERC2P4-201ENST00000563904 XIRP1Q702N8 1843 aaKnown RBP23.84■■□□□ 1.41
HERC2P4-201ENST00000563904 CLTCL1P53675 1640 aa23.84■■□□□ 1.41
HERC2P4-201ENST00000563904 TRIM52Q96A61 297 aa23.83■■□□□ 1.41
HERC2P4-201ENST00000563904 NKTRP30414 1462 aaKnown RBP23.82■■□□□ 1.4
HERC2P4-201ENST00000563904 KCNA6P17658 529 aa23.82■■□□□ 1.4
HERC2P4-201ENST00000563904 NUTM2DQ5VT03 806 aaPredicted RBP23.8■■□□□ 1.4
HERC2P4-201ENST00000563904 DIP2AQ14689 1571 aa23.79■■□□□ 1.4
HERC2P4-201ENST00000563904 ADAMTS13Q76LX8 1427 aa23.79■■□□□ 1.4
HERC2P4-201ENST00000563904 TMEM94Q12767 1356 aa23.78■■□□□ 1.4
HERC2P4-201ENST00000563904 SLC4A1APQ9BWU0 796 aaKnown RBP23.76■■□□□ 1.39
HERC2P4-201ENST00000563904 CHD2O14647 1828 aaKnown RBP23.75■■□□□ 1.39
HERC2P4-201ENST00000563904 TBX22Q9Y458 520 aa23.75■■□□□ 1.39
HERC2P4-201ENST00000563904 HSPA1LP34931 641 aa23.74■■□□□ 1.39
HERC2P4-201ENST00000563904 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
HERC2P4-201ENST00000563904 PROSER2Q86WR7 435 aaPredicted RBP23.73■■□□□ 1.39
HERC2P4-201ENST00000563904 NEXMIFQ5QGS0 1516 aa23.73■■□□□ 1.39
HERC2P4-201ENST00000563904 SETBP1Q9Y6X0 1596 aa23.73■■□□□ 1.39
HERC2P4-201ENST00000563904 NRXN3Q9Y4C0 1643 aa23.73■■□□□ 1.39
HERC2P4-201ENST00000563904 KIF1BO60333 1816 aa23.73■■□□□ 1.39
HERC2P4-201ENST00000563904 RBM33Q96EV2 1170 aaKnown RBP23.71■■□□□ 1.39
HERC2P4-201ENST00000563904 PIK3R4Q99570 1358 aa23.7■■□□□ 1.38
HERC2P4-201ENST00000563904 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
HERC2P4-201ENST00000563904 FOXD1Q16676 465 aa23.65■■□□□ 1.38
HERC2P4-201ENST00000563904 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
HERC2P4-201ENST00000563904 MSH6P52701 1360 aa23.65■■□□□ 1.38
HERC2P4-201ENST00000563904 PTPRUQ92729 1446 aa23.64■■□□□ 1.37
HERC2P4-201ENST00000563904 XRN1Q8IZH2 1706 aaKnown RBP23.62■■□□□ 1.37
HERC2P4-201ENST00000563904 MPHOSPH9Q99550 1183 aa23.62■■□□□ 1.37
HERC2P4-201ENST00000563904 NCOA3Q9Y6Q9 1424 aa23.61■■□□□ 1.37
HERC2P4-201ENST00000563904 CCDC144AA2RUR9 1427 aa23.6■■□□□ 1.37
HERC2P4-201ENST00000563904 FAM135BQ49AJ0 1406 aa23.6■■□□□ 1.37
HERC2P4-201ENST00000563904 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
HERC2P4-201ENST00000563904 AMOTL2Q9Y2J4 779 aa23.59■■□□□ 1.37
HERC2P4-201ENST00000563904 METP08581 1390 aa23.59■■□□□ 1.37
HERC2P4-201ENST00000563904 ROBO1Q9Y6N7 1651 aa23.59■■□□□ 1.37
HERC2P4-201ENST00000563904 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.37
HERC2P4-201ENST00000563904 PPLO60437 1756 aa23.57■■□□□ 1.36
HERC2P4-201ENST00000563904 MED1Q15648 1581 aaPredicted RBP23.57■■□□□ 1.36
HERC2P4-201ENST00000563904 RPGRIP1LQ68CZ1 1315 aa23.57■■□□□ 1.36
HERC2P4-201ENST00000563904 VGFO15240 615 aaPredicted RBP23.55■■□□□ 1.36
HERC2P4-201ENST00000563904 C14orf37Q86TY3 774 aa23.55■■□□□ 1.36
HERC2P4-201ENST00000563904 SETD1AO15047 1707 aaKnown RBP23.54■■□□□ 1.36
HERC2P4-201ENST00000563904 SPATA31E1Q6ZUB1 1445 aa23.54■■□□□ 1.36
HERC2P4-201ENST00000563904 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
HERC2P4-201ENST00000563904 SLAIN2Q9P270 581 aa23.51■■□□□ 1.35
HERC2P4-201ENST00000563904 C19orf44Q9H6X5 657 aa23.5■■□□□ 1.35
HERC2P4-201ENST00000563904 ILDR2Q71H61 639 aa23.49■■□□□ 1.35
HERC2P4-201ENST00000563904 IFT172Q9UG01 1749 aa23.49■■□□□ 1.35
HERC2P4-201ENST00000563904 DCCP43146 1447 aa23.48■■□□□ 1.35
HERC2P4-201ENST00000563904 CADPS2Q86UW7 1296 aa23.47■■□□□ 1.35
HERC2P4-201ENST00000563904 ATF3P18847 181 aa23.46■■□□□ 1.35
HERC2P4-201ENST00000563904 PTCH1Q13635 1447 aa23.46■■□□□ 1.35
HERC2P4-201ENST00000563904 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
HERC2P4-201ENST00000563904 PRAG1Q86YV5 1406 aa23.44■■□□□ 1.34
HERC2P4-201ENST00000563904 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
HERC2P4-201ENST00000563904 ANKRD30BQ9BXX2 1392 aa23.44■■□□□ 1.34
HERC2P4-201ENST00000563904 NALCNQ8IZF0 1738 aa23.44■■□□□ 1.34
HERC2P4-201ENST00000563904 ADGRF5Q8IZF2 1346 aa23.43■■□□□ 1.34
HERC2P4-201ENST00000563904 PHLPP1O60346 1717 aa23.43■■□□□ 1.34
HERC2P4-201ENST00000563904 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
HERC2P4-201ENST00000563904 PIK3C2GO75747 1445 aa23.4■■□□□ 1.34
HERC2P4-201ENST00000563904 COL16A1Q07092 1604 aaPredicted RBP23.4■■□□□ 1.34
HERC2P4-201ENST00000563904 MST1RQ04912 1400 aa23.39■■□□□ 1.33
HERC2P4-201ENST00000563904 AHDC1Q5TGY3 1603 aaPredicted RBP23.38■■□□□ 1.33
HERC2P4-201ENST00000563904 HRCP23327 699 aa23.37■■□□□ 1.33
HERC2P4-201ENST00000563904 ASXL1Q8IXJ9 1541 aa23.37■■□□□ 1.33
HERC2P4-201ENST00000563904 MYOM2P54296 1465 aa23.36■■□□□ 1.33
HERC2P4-201ENST00000563904 BRINP3Q76B58 766 aa23.34■■□□□ 1.33
HERC2P4-201ENST00000563904 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
HERC2P4-201ENST00000563904 JCADQ9P266 1359 aa23.32■■□□□ 1.32
HERC2P4-201ENST00000563904 TECPR2O15040 1411 aa23.32■■□□□ 1.32
HERC2P4-201ENST00000563904 KNDC1Q76NI1 1749 aa23.3■■□□□ 1.32
HERC2P4-201ENST00000563904 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
HERC2P4-201ENST00000563904 LAMC1P11047 1609 aa23.3■■□□□ 1.32
HERC2P4-201ENST00000563904 NHSL1Q5SYE7 1610 aa23.3■■□□□ 1.32
HERC2P4-201ENST00000563904 SOCS7O14512 581 aa23.27■■□□□ 1.32
HERC2P4-201ENST00000563904 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
HERC2P4-201ENST00000563904 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
HERC2P4-201ENST00000563904 TMEM132EQ6IEE7 984 aa23.26■■□□□ 1.31
HERC2P4-201ENST00000563904 STK26Q9P289 416 aa23.26■■□□□ 1.31
HERC2P4-201ENST00000563904 ABCC11Q96J66 1382 aa23.26■■□□□ 1.31
HERC2P4-201ENST00000563904 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
HERC2P4-201ENST00000563904 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
HERC2P4-201ENST00000563904 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
HERC2P4-201ENST00000563904 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
HERC2P4-201ENST00000563904 RGS17Q9UGC6 210 aaPredicted RBP23.21■■□□□ 1.31
HERC2P4-201ENST00000563904 SPATA31A6Q5VVP1 1343 aa23.21■■□□□ 1.31
HERC2P4-201ENST00000563904 PLEKHH1Q9ULM0 1364 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms