RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 RIMS2Q9UQ26 1411 aa38.26■■■■□ 3.72
SPG7-208ENST00000563783 SPHKAPQ2M3C7 1700 aa38.24■■■■□ 3.71
SPG7-208ENST00000563783 NKTRP30414 1462 aaKnown RBP38.24■■■■□ 3.71
SPG7-208ENST00000563783 KCNA6P17658 529 aa38.24■■■■□ 3.71
SPG7-208ENST00000563783 PIP4K2BP78356 416 aa38.22■■■■□ 3.71
SPG7-208ENST00000563783 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.22■■■■□ 3.71
SPG7-208ENST00000563783 NAIPQ13075 1403 aa38.21■■■■□ 3.71
SPG7-208ENST00000563783 SCAF1Q9H7N4 1312 aaKnown RBP38.21■■■■□ 3.71
SPG7-208ENST00000563783 CHD2O14647 1828 aaKnown RBP38.18■■■■□ 3.7
SPG7-208ENST00000563783 HSPA1LP34931 641 aa38.17■■■■□ 3.7
SPG7-208ENST00000563783 DIP2AQ14689 1571 aa38.16■■■■□ 3.7
SPG7-208ENST00000563783 SLC26A8Q96RN1 970 aa38.16■■■■□ 3.7
SPG7-208ENST00000563783 HFM1A2PYH4 1435 aa38.15■■■■□ 3.7
SPG7-208ENST00000563783 PPP1R15AO75807 674 aaPredicted RBP38.13■■■■□ 3.69
SPG7-208ENST00000563783 TMEM94Q12767 1356 aa38.11■■■■□ 3.69
SPG7-208ENST00000563783 TBX22Q9Y458 520 aa38.1■■■■□ 3.69
SPG7-208ENST00000563783 CHGAP10645 457 aaKnown RBP38.07■■■■□ 3.68
SPG7-208ENST00000563783 BCANQ96GW7 911 aa38.07■■■■□ 3.68
SPG7-208ENST00000563783 TRPM2O94759 1503 aa38.07■■■■□ 3.68
SPG7-208ENST00000563783 PIK3R4Q99570 1358 aa38.06■■■■□ 3.68
SPG7-208ENST00000563783 PROSER2Q86WR7 435 aaPredicted RBP38.04■■■■□ 3.68
SPG7-208ENST00000563783 ADAMTS13Q76LX8 1427 aa38.04■■■■□ 3.68
SPG7-208ENST00000563783 FAM135BQ49AJ0 1406 aa38.02■■■■□ 3.68
SPG7-208ENST00000563783 NCOA3Q9Y6Q9 1424 aa38.02■■■■□ 3.68
SPG7-208ENST00000563783 MED1Q15648 1581 aaPredicted RBP37.98■■■■□ 3.67
SPG7-208ENST00000563783 KIF1BO60333 1816 aa37.98■■■■□ 3.67
SPG7-208ENST00000563783 CLTCL1P53675 1640 aa37.98■■■■□ 3.67
SPG7-208ENST00000563783 SETBP1Q9Y6X0 1596 aa37.96■■■■□ 3.67
SPG7-208ENST00000563783 MSH6P52701 1360 aa37.93■■■■□ 3.66
SPG7-208ENST00000563783 ILDR2Q71H61 639 aa37.93■■■■□ 3.66
SPG7-208ENST00000563783 NRXN3Q9Y4C0 1643 aa37.9■■■■□ 3.66
SPG7-208ENST00000563783 ROBO1Q9Y6N7 1651 aa37.88■■■■□ 3.65
SPG7-208ENST00000563783 NEXMIFQ5QGS0 1516 aa37.87■■■■□ 3.65
SPG7-208ENST00000563783 NUTM2DQ5VT03 806 aaPredicted RBP37.85■■■■□ 3.65
SPG7-208ENST00000563783 TRIM52Q96A61 297 aa37.83■■■■□ 3.65
SPG7-208ENST00000563783 XRN1Q8IZH2 1706 aaKnown RBP37.83■■■■□ 3.65
SPG7-208ENST00000563783 ZNF326Q5BKZ1 582 aaKnown RBP37.81■■■■□ 3.64
SPG7-208ENST00000563783 ACIN1Q9UKV3 1341 aaKnown RBP37.8■■■■□ 3.64
SPG7-208ENST00000563783 SOCS7O14512 581 aa37.79■■■■□ 3.64
SPG7-208ENST00000563783 SLC4A1APQ9BWU0 796 aaKnown RBP37.79■■■■□ 3.64
SPG7-208ENST00000563783 SENP3Q9H4L4 574 aaPredicted RBP37.79■■■■□ 3.64
SPG7-208ENST00000563783 RBM33Q96EV2 1170 aaKnown RBP37.78■■■■□ 3.64
SPG7-208ENST00000563783 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.76■■■■□ 3.64
SPG7-208ENST00000563783 PTPRUQ92729 1446 aa37.76■■■■□ 3.63
SPG7-208ENST00000563783 SLAIN2Q9P270 581 aa37.75■■■■□ 3.63
SPG7-208ENST00000563783 AMOTL2Q9Y2J4 779 aa37.73■■■■□ 3.63
SPG7-208ENST00000563783 RPGRIP1LQ68CZ1 1315 aa37.72■■■■□ 3.63
SPG7-208ENST00000563783 C19orf44Q9H6X5 657 aa37.72■■■■□ 3.63
SPG7-208ENST00000563783 DCCP43146 1447 aa37.71■■■■□ 3.63
SPG7-208ENST00000563783 CADPS2Q86UW7 1296 aa37.7■■■■□ 3.63
SPG7-208ENST00000563783 PPLO60437 1756 aa37.68■■■■□ 3.62
SPG7-208ENST00000563783 VGFO15240 615 aaPredicted RBP37.67■■■■□ 3.62
SPG7-208ENST00000563783 SETD1AO15047 1707 aaKnown RBP37.65■■■■□ 3.62
SPG7-208ENST00000563783 PHLPP1O60346 1717 aa37.65■■■■□ 3.62
SPG7-208ENST00000563783 C14orf37Q86TY3 774 aa37.65■■■■□ 3.62
SPG7-208ENST00000563783 METP08581 1390 aa37.65■■■■□ 3.62
SPG7-208ENST00000563783 ATF3P18847 181 aa37.61■■■■□ 3.61
SPG7-208ENST00000563783 PHF23Q9BUL5 403 aaPredicted RBP37.61■■■■□ 3.61
SPG7-208ENST00000563783 PRAG1Q86YV5 1406 aa37.61■■■■□ 3.61
SPG7-208ENST00000563783 CCDC144AA2RUR9 1427 aa37.58■■■■□ 3.61
SPG7-208ENST00000563783 AHDC1Q5TGY3 1603 aaPredicted RBP37.58■■■■□ 3.61
SPG7-208ENST00000563783 COL16A1Q07092 1604 aaPredicted RBP37.57■■■■□ 3.6
SPG7-208ENST00000563783 MPHOSPH9Q99550 1183 aa37.55■■■■□ 3.6
SPG7-208ENST00000563783 PTCH1Q13635 1447 aa37.54■■■■□ 3.6
SPG7-208ENST00000563783 SETD5Q9C0A6 1442 aa37.54■■■■□ 3.6
SPG7-208ENST00000563783 ADGRL3Q9HAR2 1447 aa37.53■■■■□ 3.6
SPG7-208ENST00000563783 JCADQ9P266 1359 aa37.52■■■■□ 3.6
SPG7-208ENST00000563783 IFT172Q9UG01 1749 aa37.51■■■■□ 3.6
SPG7-208ENST00000563783 SPATA31E1Q6ZUB1 1445 aa37.51■■■■□ 3.59
SPG7-208ENST00000563783 NALCNQ8IZF0 1738 aa37.49■■■■□ 3.59
SPG7-208ENST00000563783 FOXD1Q16676 465 aa37.46■■■■□ 3.59
SPG7-208ENST00000563783 MST1RQ04912 1400 aa37.45■■■■□ 3.59
SPG7-208ENST00000563783 ANKRD30BQ9BXX2 1392 aa37.45■■■■□ 3.59
SPG7-208ENST00000563783 SHPRHQ149N8 1683 aa37.43■■■■□ 3.58
SPG7-208ENST00000563783 ASXL1Q8IXJ9 1541 aa37.41■■■■□ 3.58
SPG7-208ENST00000563783 NHSL1Q5SYE7 1610 aa37.4■■■■□ 3.58
SPG7-208ENST00000563783 BRINP3Q76B58 766 aa37.4■■■■□ 3.58
SPG7-208ENST00000563783 SPATA31A6Q5VVP1 1343 aa37.36■■■■□ 3.57
SPG7-208ENST00000563783 RGS17Q9UGC6 210 aaPredicted RBP37.36■■■■□ 3.57
SPG7-208ENST00000563783 RAB3GAP2Q9H2M9 1393 aa37.35■■■■□ 3.57
SPG7-208ENST00000563783 ROBO2Q9HCK4 1378 aa37.35■■■■□ 3.57
SPG7-208ENST00000563783 TECPR2O15040 1411 aa37.31■■■■□ 3.56
SPG7-208ENST00000563783 LAMC1P11047 1609 aa37.31■■■■□ 3.56
SPG7-208ENST00000563783 ADGRF5Q8IZF2 1346 aa37.31■■■■□ 3.56
SPG7-208ENST00000563783 PIK3C2GO75747 1445 aa37.3■■■■□ 3.56
SPG7-208ENST00000563783 KNDC1Q76NI1 1749 aa37.3■■■■□ 3.56
SPG7-208ENST00000563783 HRCP23327 699 aa37.27■■■■□ 3.56
SPG7-208ENST00000563783 RGL3Q3MIN7 710 aa37.27■■■■□ 3.56
SPG7-208ENST00000563783 C1orf167Q5SNV9 1468 aa37.26■■■■□ 3.55
SPG7-208ENST00000563783 CDC42BPGQ6DT37 1551 aa37.25■■■■□ 3.55
SPG7-208ENST00000563783 MYOM2P54296 1465 aa37.24■■■■□ 3.55
SPG7-208ENST00000563783 NRXN1Q9ULB1 1477 aa37.24■■■■□ 3.55
SPG7-208ENST00000563783 LRPPRCP42704 1394 aaKnown RBP37.23■■■■□ 3.55
SPG7-208ENST00000563783 ABCC11Q96J66 1382 aa37.21■■■■□ 3.55
SPG7-208ENST00000563783 LRP6O75581 1613 aa37.21■■■■□ 3.55
SPG7-208ENST00000563783 LRRC59Q96AG4 307 aaKnown RBP37.18■■■■□ 3.54
SPG7-208ENST00000563783 POTEAQ6S8J7 498 aa37.13■■■■□ 3.53
SPG7-208ENST00000563783 YTHDC2Q9H6S0 1430 aaKnown RBP37.11■■■■□ 3.53
SPG7-208ENST00000563783 SIRT1Q96EB6 747 aa37.11■■■■□ 3.53
SPG7-208ENST00000563783 C14orf93Q9H972 538 aaKnown RBP37.11■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms