RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 ADGRB3O60242 1522 aa27.68■■■□□ 2.02
SPSB3-204ENST00000563741 RGL3Q3MIN7 710 aa27.68■■■□□ 2.02
SPSB3-204ENST00000563741 NPHP4O75161 1426 aaPredicted RBP27.67■■■□□ 2.02
SPSB3-204ENST00000563741 CERKQ8TCT0 537 aa27.67■■■□□ 2.02
SPSB3-204ENST00000563741 TMEM2Q9UHN6 1383 aa27.66■■■□□ 2.02
SPSB3-204ENST00000563741 SCAF11Q99590 1463 aaKnown RBP27.65■■■□□ 2.02
SPSB3-204ENST00000563741 TXNDC2Q86VQ3 553 aa27.65■■■□□ 2.02
SPSB3-204ENST00000563741 EID1Q9Y6B2 187 aa27.65■■■□□ 2.02
SPSB3-204ENST00000563741 IQGAP1P46940 1657 aa27.65■■■□□ 2.02
SPSB3-204ENST00000563741 KIF1BO60333 1816 aa27.65■■■□□ 2.02
SPSB3-204ENST00000563741 DCAF11Q8TEB1 546 aa27.64■■■□□ 2.01
SPSB3-204ENST00000563741 LTKP29376 864 aa27.63■■■□□ 2.01
SPSB3-204ENST00000563741 LTBP4Q8N2S1 1624 aa27.62■■■□□ 2.01
SPSB3-204ENST00000563741 NBPF8Q3BBV2 869 aa27.62■■■□□ 2.01
SPSB3-204ENST00000563741 MYO5BQ9ULV0 1848 aa27.62■■■□□ 2.01
SPSB3-204ENST00000563741 TMEM131LA2VDJ0 1609 aa27.61■■■□□ 2.01
SPSB3-204ENST00000563741 ZNF335Q9H4Z2 1342 aaPredicted RBP27.6■■■□□ 2.01
SPSB3-204ENST00000563741 KDM2AQ9Y2K7 1162 aa27.58■■■□□ 2.01
SPSB3-204ENST00000563741 CHGAP10645 457 aaKnown RBP27.57■■■□□ 2
SPSB3-204ENST00000563741 PRAG1Q86YV5 1406 aa27.56■■■□□ 2
SPSB3-204ENST00000563741 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
SPSB3-204ENST00000563741 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
SPSB3-204ENST00000563741 FBXO41Q8TF61 875 aa27.55■■■□□ 2
SPSB3-204ENST00000563741 HDGFP51858 240 aaKnown RBP27.53■■■□□ 2
SPSB3-204ENST00000563741 MYOM2P54296 1465 aa27.52■■■□□ 2
SPSB3-204ENST00000563741 IFT172Q9UG01 1749 aa27.52■■■□□ 2
SPSB3-204ENST00000563741 RIMS2Q9UQ26 1411 aa27.51■■□□□ 1.99
SPSB3-204ENST00000563741 RALGAPBQ86X10 1494 aa27.51■■□□□ 1.99
SPSB3-204ENST00000563741 ZFYVE9O95405 1425 aa27.5■■□□□ 1.99
SPSB3-204ENST00000563741 STAC3Q96MF2 364 aa27.5■■□□□ 1.99
SPSB3-204ENST00000563741 IQSEC2Q5JU85 1478 aa27.48■■□□□ 1.99
SPSB3-204ENST00000563741 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.47■■□□□ 1.99
SPSB3-204ENST00000563741 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
SPSB3-204ENST00000563741 RPGRIP1LQ68CZ1 1315 aa27.47■■□□□ 1.99
SPSB3-204ENST00000563741 CPS1P31327 1500 aa27.46■■□□□ 1.99
SPSB3-204ENST00000563741 PPLO60437 1756 aa27.46■■□□□ 1.99
SPSB3-204ENST00000563741 NRXN1Q9ULB1 1477 aa27.45■■□□□ 1.98
SPSB3-204ENST00000563741 TRPM1Q7Z4N2 1603 aa27.44■■□□□ 1.98
SPSB3-204ENST00000563741 PLEKHG1Q9ULL1 1385 aa27.42■■□□□ 1.98
SPSB3-204ENST00000563741 BCANQ96GW7 911 aa27.42■■□□□ 1.98
SPSB3-204ENST00000563741 ADGRF5Q8IZF2 1346 aa27.42■■□□□ 1.98
SPSB3-204ENST00000563741 ZNF316A6NFI3 1004 aaPredicted RBP27.41■■□□□ 1.98
SPSB3-204ENST00000563741 STRCP1A6NGW2 1772 aa27.41■■□□□ 1.98
SPSB3-204ENST00000563741 SLC26A8Q96RN1 970 aa27.39■■□□□ 1.98
SPSB3-204ENST00000563741 ROCK2O75116 1388 aaKnown RBP27.38■■□□□ 1.97
SPSB3-204ENST00000563741 NUTM2DQ5VT03 806 aaPredicted RBP27.38■■□□□ 1.97
SPSB3-204ENST00000563741 GPRASP1Q5JY77 1395 aa27.37■■□□□ 1.97
SPSB3-204ENST00000563741 PIK3C2GO75747 1445 aa27.37■■□□□ 1.97
SPSB3-204ENST00000563741 NBPF1Q3BBV0 1214 aa27.34■■□□□ 1.97
SPSB3-204ENST00000563741 SENP3Q9H4L4 574 aaPredicted RBP27.34■■□□□ 1.97
SPSB3-204ENST00000563741 VGFO15240 615 aaPredicted RBP27.33■■□□□ 1.97
SPSB3-204ENST00000563741 CARD11Q9BXL7 1154 aa27.33■■□□□ 1.96
SPSB3-204ENST00000563741 KIAA1210Q9ULL0 1709 aa27.32■■□□□ 1.96
SPSB3-204ENST00000563741 EIF4G2P78344 907 aaKnown RBP eCLIP27.32■■□□□ 1.96
SPSB3-204ENST00000563741 LAMC1P11047 1609 aa27.31■■□□□ 1.96
SPSB3-204ENST00000563741 TBX22Q9Y458 520 aa27.31■■□□□ 1.96
SPSB3-204ENST00000563741 USP47Q96K76 1375 aa27.31■■□□□ 1.96
SPSB3-204ENST00000563741 HSPA5P11021 654 aaKnown RBP27.3■■□□□ 1.96
SPSB3-204ENST00000563741 KCNA6P17658 529 aa27.3■■□□□ 1.96
SPSB3-204ENST00000563741 LRRC7Q96NW7 1537 aa27.3■■□□□ 1.96
SPSB3-204ENST00000563741 DIP2AQ14689 1571 aa27.29■■□□□ 1.96
SPSB3-204ENST00000563741 HIRIP3Q9BW71 556 aaPredicted RBP27.29■■□□□ 1.96
SPSB3-204ENST00000563741 ADAMTS13Q76LX8 1427 aa27.28■■□□□ 1.96
SPSB3-204ENST00000563741 CFAP70Q5T0N1 1121 aa27.27■■□□□ 1.96
SPSB3-204ENST00000563741 CHD2O14647 1828 aaKnown RBP27.26■■□□□ 1.95
SPSB3-204ENST00000563741 UBAP1LF5GYI3 381 aa27.26■■□□□ 1.95
SPSB3-204ENST00000563741 NWD1Q149M9 1564 aa27.25■■□□□ 1.95
SPSB3-204ENST00000563741 SETBP1Q9Y6X0 1596 aa27.24■■□□□ 1.95
SPSB3-204ENST00000563741 C14orf93Q9H972 538 aaKnown RBP27.24■■□□□ 1.95
SPSB3-204ENST00000563741 NRXN3Q9Y4C0 1643 aa27.22■■□□□ 1.95
SPSB3-204ENST00000563741 PIK3R4Q99570 1358 aa27.22■■□□□ 1.95
SPSB3-204ENST00000563741 ADGRB1O14514 1584 aa27.21■■□□□ 1.95
SPSB3-204ENST00000563741 NKTRP30414 1462 aaKnown RBP27.21■■□□□ 1.95
SPSB3-204ENST00000563741 XIRP1Q702N8 1843 aaKnown RBP27.21■■□□□ 1.95
SPSB3-204ENST00000563741 TOM1O60784 492 aa27.19■■□□□ 1.94
SPSB3-204ENST00000563741 PROSER2Q86WR7 435 aaPredicted RBP27.19■■□□□ 1.94
SPSB3-204ENST00000563741 TMEM94Q12767 1356 aa27.15■■□□□ 1.94
SPSB3-204ENST00000563741 ASXL1Q8IXJ9 1541 aa27.15■■□□□ 1.94
SPSB3-204ENST00000563741 ALKQ9UM73 1620 aa27.14■■□□□ 1.94
SPSB3-204ENST00000563741 ST20-MTHFSA0A0A6YYL1 179 aa27.13■■□□□ 1.93
SPSB3-204ENST00000563741 TMEM132EQ6IEE7 984 aa27.1■■□□□ 1.93
SPSB3-204ENST00000563741 AMOTL2Q9Y2J4 779 aa27.1■■□□□ 1.93
SPSB3-204ENST00000563741 PTPRUQ92729 1446 aa27.1■■□□□ 1.93
SPSB3-204ENST00000563741 METP08581 1390 aa27.1■■□□□ 1.93
SPSB3-204ENST00000563741 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
SPSB3-204ENST00000563741 RBM33Q96EV2 1170 aaKnown RBP27.09■■□□□ 1.93
SPSB3-204ENST00000563741 PIP4K2BP78356 416 aa27.08■■□□□ 1.93
SPSB3-204ENST00000563741 EIF3AQ14152 1382 aaKnown RBP27.08■■□□□ 1.93
SPSB3-204ENST00000563741 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
SPSB3-204ENST00000563741 XRN1Q8IZH2 1706 aaKnown RBP27.07■■□□□ 1.92
SPSB3-204ENST00000563741 NCOA3Q9Y6Q9 1424 aa27.05■■□□□ 1.92
SPSB3-204ENST00000563741 C11orf95C9JLR9 678 aaPredicted RBP27.04■■□□□ 1.92
SPSB3-204ENST00000563741 WASHC2AQ641Q2 1341 aa27.04■■□□□ 1.92
SPSB3-204ENST00000563741 TESK2Q96S53 571 aa27.04■■□□□ 1.92
SPSB3-204ENST00000563741 MSH6P52701 1360 aa27.03■■□□□ 1.92
SPSB3-204ENST00000563741 YTHDC2Q9H6S0 1430 aaKnown RBP27.02■■□□□ 1.92
SPSB3-204ENST00000563741 CCDC7Q96M83 1385 aa27.01■■□□□ 1.91
SPSB3-204ENST00000563741 TRAK1Q9UPV9 953 aa27.01■■□□□ 1.91
SPSB3-204ENST00000563741 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
SPSB3-204ENST00000563741 KIF7Q2M1P5 1343 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms