RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 SLC26A8Q96RN1 970 aa25.45■■□□□ 1.66
SPSB3-202ENST00000563668 RIMS2Q9UQ26 1411 aa25.44■■□□□ 1.66
SPSB3-202ENST00000563668 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
SPSB3-202ENST00000563668 CPS1P31327 1500 aa25.43■■□□□ 1.66
SPSB3-202ENST00000563668 FOXD1Q16676 465 aa25.41■■□□□ 1.66
SPSB3-202ENST00000563668 CLTCL1P53675 1640 aa25.38■■□□□ 1.65
SPSB3-202ENST00000563668 UBAP1LF5GYI3 381 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 TRPM2O94759 1503 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 BCANQ96GW7 911 aa25.37■■□□□ 1.65
SPSB3-202ENST00000563668 SETD5Q9C0A6 1442 aa25.36■■□□□ 1.65
SPSB3-202ENST00000563668 PPP1R15AO75807 674 aaPredicted RBP25.36■■□□□ 1.65
SPSB3-202ENST00000563668 PLEKHG1Q9ULL1 1385 aa25.35■■□□□ 1.65
SPSB3-202ENST00000563668 MPHOSPH9Q99550 1183 aa25.33■■□□□ 1.65
SPSB3-202ENST00000563668 HDGFP51858 240 aaKnown RBP25.32■■□□□ 1.64
SPSB3-202ENST00000563668 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.32■■□□□ 1.64
SPSB3-202ENST00000563668 ZNF326Q5BKZ1 582 aaKnown RBP25.3■■□□□ 1.64
SPSB3-202ENST00000563668 RAB3GAP2Q9H2M9 1393 aa25.3■■□□□ 1.64
SPSB3-202ENST00000563668 KCNA6P17658 529 aa25.29■■□□□ 1.64
SPSB3-202ENST00000563668 RBM33Q96EV2 1170 aaKnown RBP25.29■■□□□ 1.64
SPSB3-202ENST00000563668 ADAMTS13Q76LX8 1427 aa25.28■■□□□ 1.64
SPSB3-202ENST00000563668 ALKQ9UM73 1620 aa25.28■■□□□ 1.64
SPSB3-202ENST00000563668 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
SPSB3-202ENST00000563668 TBX22Q9Y458 520 aa25.26■■□□□ 1.63
SPSB3-202ENST00000563668 PIP4K2BP78356 416 aa25.25■■□□□ 1.63
SPSB3-202ENST00000563668 KIF1BO60333 1816 aa25.23■■□□□ 1.63
SPSB3-202ENST00000563668 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
SPSB3-202ENST00000563668 TOM1O60784 492 aa25.22■■□□□ 1.63
SPSB3-202ENST00000563668 TMEM94Q12767 1356 aa25.21■■□□□ 1.63
SPSB3-202ENST00000563668 NWD1Q149M9 1564 aa25.21■■□□□ 1.63
SPSB3-202ENST00000563668 PROSER2Q86WR7 435 aaPredicted RBP25.21■■□□□ 1.63
SPSB3-202ENST00000563668 SCAF1Q9H7N4 1312 aaKnown RBP25.21■■□□□ 1.63
SPSB3-202ENST00000563668 NRXN3Q9Y4C0 1643 aa25.2■■□□□ 1.63
SPSB3-202ENST00000563668 CHD2O14647 1828 aaKnown RBP25.2■■□□□ 1.62
SPSB3-202ENST00000563668 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
SPSB3-202ENST00000563668 PTPRUQ92729 1446 aa25.16■■□□□ 1.62
SPSB3-202ENST00000563668 SETBP1Q9Y6X0 1596 aa25.15■■□□□ 1.62
SPSB3-202ENST00000563668 NKTRP30414 1462 aaKnown RBP25.15■■□□□ 1.62
SPSB3-202ENST00000563668 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
SPSB3-202ENST00000563668 DIP2AQ14689 1571 aa25.14■■□□□ 1.62
SPSB3-202ENST00000563668 METP08581 1390 aa25.13■■□□□ 1.61
SPSB3-202ENST00000563668 RGL3Q3MIN7 710 aa25.13■■□□□ 1.61
SPSB3-202ENST00000563668 AMOTL2Q9Y2J4 779 aa25.12■■□□□ 1.61
SPSB3-202ENST00000563668 SPATA31E1Q6ZUB1 1445 aa25.12■■□□□ 1.61
SPSB3-202ENST00000563668 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
SPSB3-202ENST00000563668 HSPA1LP34931 641 aa25.12■■□□□ 1.61
SPSB3-202ENST00000563668 PIK3R4Q99570 1358 aa25.1■■□□□ 1.61
SPSB3-202ENST00000563668 RPGRIP1LQ68CZ1 1315 aa25.09■■□□□ 1.61
SPSB3-202ENST00000563668 VGFO15240 615 aaPredicted RBP25.09■■□□□ 1.61
SPSB3-202ENST00000563668 PPLO60437 1756 aa25.08■■□□□ 1.61
SPSB3-202ENST00000563668 ADGRF5Q8IZF2 1346 aa25.05■■□□□ 1.6
SPSB3-202ENST00000563668 XRN1Q8IZH2 1706 aaKnown RBP25.03■■□□□ 1.6
SPSB3-202ENST00000563668 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
SPSB3-202ENST00000563668 SETD1AO15047 1707 aaKnown RBP25.02■■□□□ 1.6
SPSB3-202ENST00000563668 MSH6P52701 1360 aa25.01■■□□□ 1.59
SPSB3-202ENST00000563668 IFT172Q9UG01 1749 aa24.99■■□□□ 1.59
SPSB3-202ENST00000563668 C14orf37Q86TY3 774 aa24.98■■□□□ 1.59
SPSB3-202ENST00000563668 NCOA3Q9Y6Q9 1424 aa24.97■■□□□ 1.59
SPSB3-202ENST00000563668 SLAIN2Q9P270 581 aa24.96■■□□□ 1.59
SPSB3-202ENST00000563668 FAM135BQ49AJ0 1406 aa24.96■■□□□ 1.59
SPSB3-202ENST00000563668 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.58
SPSB3-202ENST00000563668 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.95■■□□□ 1.58
SPSB3-202ENST00000563668 ROBO1Q9Y6N7 1651 aa24.92■■□□□ 1.58
SPSB3-202ENST00000563668 ROBO2Q9HCK4 1378 aa24.92■■□□□ 1.58
SPSB3-202ENST00000563668 PIK3C2GO75747 1445 aa24.9■■□□□ 1.58
SPSB3-202ENST00000563668 TMEM132EQ6IEE7 984 aa24.9■■□□□ 1.58
SPSB3-202ENST00000563668 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.57
SPSB3-202ENST00000563668 ATF3P18847 181 aa24.88■■□□□ 1.57
SPSB3-202ENST00000563668 DISP3Q9P2K9 1392 aa24.88■■□□□ 1.57
SPSB3-202ENST00000563668 ASXL1Q8IXJ9 1541 aa24.88■■□□□ 1.57
SPSB3-202ENST00000563668 CADPS2Q86UW7 1296 aa24.87■■□□□ 1.57
SPSB3-202ENST00000563668 STK26Q9P289 416 aa24.86■■□□□ 1.57
SPSB3-202ENST00000563668 NRXN1Q9ULB1 1477 aa24.85■■□□□ 1.57
SPSB3-202ENST00000563668 PTCH1Q13635 1447 aa24.85■■□□□ 1.57
SPSB3-202ENST00000563668 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
SPSB3-202ENST00000563668 NALCNQ8IZF0 1738 aa24.84■■□□□ 1.57
SPSB3-202ENST00000563668 C14orf93Q9H972 538 aaKnown RBP24.84■■□□□ 1.57
SPSB3-202ENST00000563668 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
SPSB3-202ENST00000563668 ADGRL3Q9HAR2 1447 aa24.84■■□□□ 1.57
SPSB3-202ENST00000563668 MYOM2P54296 1465 aa24.83■■□□□ 1.57
SPSB3-202ENST00000563668 KDM2AQ9Y2K7 1162 aa24.83■■□□□ 1.57
SPSB3-202ENST00000563668 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
SPSB3-202ENST00000563668 WAPLQ7Z5K2 1190 aa24.81■■□□□ 1.56
SPSB3-202ENST00000563668 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
SPSB3-202ENST00000563668 DCCP43146 1447 aa24.81■■□□□ 1.56
SPSB3-202ENST00000563668 MST1RQ04912 1400 aa24.8■■□□□ 1.56
SPSB3-202ENST00000563668 LRPPRCP42704 1394 aaKnown RBP24.79■■□□□ 1.56
SPSB3-202ENST00000563668 BRINP3Q76B58 766 aa24.79■■□□□ 1.56
SPSB3-202ENST00000563668 MED1Q15648 1581 aaPredicted RBP24.77■■□□□ 1.56
SPSB3-202ENST00000563668 ABCC11Q96J66 1382 aa24.77■■□□□ 1.56
SPSB3-202ENST00000563668 PLEKHH1Q9ULM0 1364 aa24.77■■□□□ 1.56
SPSB3-202ENST00000563668 YTHDC2Q9H6S0 1430 aaKnown RBP24.77■■□□□ 1.56
SPSB3-202ENST00000563668 ILDR2Q71H61 639 aa24.76■■□□□ 1.55
SPSB3-202ENST00000563668 TECPR2O15040 1411 aa24.76■■□□□ 1.55
SPSB3-202ENST00000563668 PHLPP1O60346 1717 aa24.75■■□□□ 1.55
SPSB3-202ENST00000563668 DDX17Q92841 729 aaKnown RBP24.71■■□□□ 1.55
SPSB3-202ENST00000563668 COL16A1Q07092 1604 aaPredicted RBP24.71■■□□□ 1.55
SPSB3-202ENST00000563668 KNDC1Q76NI1 1749 aa24.71■■□□□ 1.55
SPSB3-202ENST00000563668 SIN3AQ96ST3 1273 aa24.71■■□□□ 1.55
SPSB3-202ENST00000563668 LAMC1P11047 1609 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms