RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 CHGAP10645 457 aaKnown RBP27.82■■■□□ 2.04
CDH11-206ENST00000562998 FOXD1Q16676 465 aa27.81■■■□□ 2.04
CDH11-206ENST00000562998 FBXO41Q8TF61 875 aa27.8■■■□□ 2.04
CDH11-206ENST00000562998 PLEKHG1Q9ULL1 1385 aa27.8■■■□□ 2.04
CDH11-206ENST00000562998 STRCP1A6NGW2 1772 aa27.79■■■□□ 2.04
CDH11-206ENST00000562998 CPS1P31327 1500 aa27.79■■■□□ 2.04
CDH11-206ENST00000562998 HDGFP51858 240 aaKnown RBP27.79■■■□□ 2.04
CDH11-206ENST00000562998 ILDR1Q86SU0 546 aaPredicted RBP27.79■■■□□ 2.04
CDH11-206ENST00000562998 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
CDH11-206ENST00000562998 KIF1BO60333 1816 aa27.78■■■□□ 2.04
CDH11-206ENST00000562998 NEXMIFQ5QGS0 1516 aa27.72■■■□□ 2.03
CDH11-206ENST00000562998 SLC26A8Q96RN1 970 aa27.71■■■□□ 2.03
CDH11-206ENST00000562998 ADAMTS13Q76LX8 1427 aa27.7■■■□□ 2.03
CDH11-206ENST00000562998 CCDC144AA2RUR9 1427 aa27.69■■■□□ 2.02
CDH11-206ENST00000562998 PPP1R15AO75807 674 aaPredicted RBP27.69■■■□□ 2.02
CDH11-206ENST00000562998 NUTM2DQ5VT03 806 aaPredicted RBP27.69■■■□□ 2.02
CDH11-206ENST00000562998 SPATA31E1Q6ZUB1 1445 aa27.67■■■□□ 2.02
CDH11-206ENST00000562998 TBX22Q9Y458 520 aa27.67■■■□□ 2.02
CDH11-206ENST00000562998 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
CDH11-206ENST00000562998 SETBP1Q9Y6X0 1596 aa27.66■■■□□ 2.02
CDH11-206ENST00000562998 ZNF326Q5BKZ1 582 aaKnown RBP27.66■■■□□ 2.02
CDH11-206ENST00000562998 NRXN3Q9Y4C0 1643 aa27.66■■■□□ 2.02
CDH11-206ENST00000562998 DIP2AQ14689 1571 aa27.65■■■□□ 2.02
CDH11-206ENST00000562998 NWD1Q149M9 1564 aa27.65■■■□□ 2.02
CDH11-206ENST00000562998 RPGRIP1LQ68CZ1 1315 aa27.64■■■□□ 2.01
CDH11-206ENST00000562998 KCNA6P17658 529 aa27.63■■■□□ 2.01
CDH11-206ENST00000562998 CHD2O14647 1828 aaKnown RBP27.62■■■□□ 2.01
CDH11-206ENST00000562998 ANKRD30BQ9BXX2 1392 aa27.62■■■□□ 2.01
CDH11-206ENST00000562998 PPLO60437 1756 aa27.61■■■□□ 2.01
CDH11-206ENST00000562998 BCANQ96GW7 911 aa27.6■■■□□ 2.01
CDH11-206ENST00000562998 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
CDH11-206ENST00000562998 XIRP1Q702N8 1843 aaKnown RBP27.58■■■□□ 2.01
CDH11-206ENST00000562998 SENP3Q9H4L4 574 aaPredicted RBP27.58■■■□□ 2.01
CDH11-206ENST00000562998 NKTRP30414 1462 aaKnown RBP27.57■■■□□ 2
CDH11-206ENST00000562998 IFT172Q9UG01 1749 aa27.55■■■□□ 2
CDH11-206ENST00000562998 VGFO15240 615 aaPredicted RBP27.55■■■□□ 2
CDH11-206ENST00000562998 ALKQ9UM73 1620 aa27.53■■■□□ 2
CDH11-206ENST00000562998 TRIM26Q12899 539 aaPredicted RBP27.52■■■□□ 2
CDH11-206ENST00000562998 PTPRUQ92729 1446 aa27.51■■□□□ 1.99
CDH11-206ENST00000562998 SETD1AO15047 1707 aaKnown RBP27.51■■□□□ 1.99
CDH11-206ENST00000562998 METP08581 1390 aa27.49■■□□□ 1.99
CDH11-206ENST00000562998 TMEM94Q12767 1356 aa27.49■■□□□ 1.99
CDH11-206ENST00000562998 RGL3Q3MIN7 710 aa27.49■■□□□ 1.99
CDH11-206ENST00000562998 UBAP1LF5GYI3 381 aa27.48■■□□□ 1.99
CDH11-206ENST00000562998 XRN1Q8IZH2 1706 aaKnown RBP27.47■■□□□ 1.99
CDH11-206ENST00000562998 PROSER2Q86WR7 435 aaPredicted RBP27.46■■□□□ 1.99
CDH11-206ENST00000562998 ADGRF5Q8IZF2 1346 aa27.45■■□□□ 1.99
CDH11-206ENST00000562998 NCOA3Q9Y6Q9 1424 aa27.43■■□□□ 1.98
CDH11-206ENST00000562998 TOM1O60784 492 aa27.43■■□□□ 1.98
CDH11-206ENST00000562998 AMOTL2Q9Y2J4 779 aa27.43■■□□□ 1.98
CDH11-206ENST00000562998 NRXN1Q9ULB1 1477 aa27.42■■□□□ 1.98
CDH11-206ENST00000562998 MYOM2P54296 1465 aa27.41■■□□□ 1.98
CDH11-206ENST00000562998 PIK3C2GO75747 1445 aa27.41■■□□□ 1.98
CDH11-206ENST00000562998 RBM33Q96EV2 1170 aaKnown RBP27.4■■□□□ 1.98
CDH11-206ENST00000562998 PRAG1Q86YV5 1406 aa27.4■■□□□ 1.98
CDH11-206ENST00000562998 DHX57Q6P158 1386 aaKnown RBP27.34■■□□□ 1.97
CDH11-206ENST00000562998 ASXL1Q8IXJ9 1541 aa27.31■■□□□ 1.96
CDH11-206ENST00000562998 MSH6P52701 1360 aa27.31■■□□□ 1.96
CDH11-206ENST00000562998 PTCH1Q13635 1447 aa27.31■■□□□ 1.96
CDH11-206ENST00000562998 PIP4K2BP78356 416 aa27.3■■□□□ 1.96
CDH11-206ENST00000562998 STAC3Q96MF2 364 aa27.3■■□□□ 1.96
CDH11-206ENST00000562998 C14orf93Q9H972 538 aaKnown RBP27.29■■□□□ 1.96
CDH11-206ENST00000562998 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.27■■□□□ 1.96
CDH11-206ENST00000562998 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
CDH11-206ENST00000562998 LAMC1P11047 1609 aa27.27■■□□□ 1.96
CDH11-206ENST00000562998 TECPR2O15040 1411 aa27.26■■□□□ 1.95
CDH11-206ENST00000562998 ROBO2Q9HCK4 1378 aa27.26■■□□□ 1.95
CDH11-206ENST00000562998 FAM135BQ49AJ0 1406 aa27.24■■□□□ 1.95
CDH11-206ENST00000562998 DCAF11Q8TEB1 546 aa27.24■■□□□ 1.95
CDH11-206ENST00000562998 DCCP43146 1447 aa27.24■■□□□ 1.95
CDH11-206ENST00000562998 LRPPRCP42704 1394 aaKnown RBP27.23■■□□□ 1.95
CDH11-206ENST00000562998 ABCC11Q96J66 1382 aa27.22■■□□□ 1.95
CDH11-206ENST00000562998 SCAF1Q9H7N4 1312 aaKnown RBP27.22■■□□□ 1.95
CDH11-206ENST00000562998 CFAP70Q5T0N1 1121 aa27.22■■□□□ 1.95
CDH11-206ENST00000562998 ADGRL3Q9HAR2 1447 aa27.22■■□□□ 1.95
CDH11-206ENST00000562998 KNDC1Q76NI1 1749 aa27.21■■□□□ 1.95
CDH11-206ENST00000562998 TMEM132EQ6IEE7 984 aa27.21■■□□□ 1.95
CDH11-206ENST00000562998 NALCNQ8IZF0 1738 aa27.21■■□□□ 1.95
CDH11-206ENST00000562998 SLAIN2Q9P270 581 aa27.2■■□□□ 1.94
CDH11-206ENST00000562998 YTHDC2Q9H6S0 1430 aaKnown RBP27.19■■□□□ 1.94
CDH11-206ENST00000562998 HSPA1LP34931 641 aa27.19■■□□□ 1.94
CDH11-206ENST00000562998 ADGRB1O14514 1584 aa27.18■■□□□ 1.94
CDH11-206ENST00000562998 C14orf37Q86TY3 774 aa27.18■■□□□ 1.94
CDH11-206ENST00000562998 CADPS2Q86UW7 1296 aa27.18■■□□□ 1.94
CDH11-206ENST00000562998 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
CDH11-206ENST00000562998 ROBO1Q9Y6N7 1651 aa27.17■■□□□ 1.94
CDH11-206ENST00000562998 SIN3AQ96ST3 1273 aa27.16■■□□□ 1.94
CDH11-206ENST00000562998 ATF3P18847 181 aa27.14■■□□□ 1.94
CDH11-206ENST00000562998 SIRT1Q96EB6 747 aa27.14■■□□□ 1.94
CDH11-206ENST00000562998 STK26Q9P289 416 aa27.12■■□□□ 1.93
CDH11-206ENST00000562998 MST1RQ04912 1400 aa27.12■■□□□ 1.93
CDH11-206ENST00000562998 DLC1Q96QB1 1528 aa27.1■■□□□ 1.93
CDH11-206ENST00000562998 L3MBTL2Q969R5 705 aa27.09■■□□□ 1.93
CDH11-206ENST00000562998 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
CDH11-206ENST00000562998 KIAA1210Q9ULL0 1709 aa27.08■■□□□ 1.93
CDH11-206ENST00000562998 WAPLQ7Z5K2 1190 aa27.08■■□□□ 1.93
CDH11-206ENST00000562998 CDC42BPGQ6DT37 1551 aa27.05■■□□□ 1.92
CDH11-206ENST00000562998 NEUROD1Q13562 356 aa27.04■■□□□ 1.92
CDH11-206ENST00000562998 BRINP3Q76B58 766 aa27.03■■□□□ 1.92
CDH11-206ENST00000562998 PCGF6Q9BYE7 350 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms