RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 LTKP29376 864 aa13.25□□□□□ -0.29
TMEM87A-205ENST00000562946 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
TMEM87A-205ENST00000562946 TMEM2Q9UHN6 1383 aa13.24□□□□□ -0.29
TMEM87A-205ENST00000562946 SCAF11Q99590 1463 aaKnown RBP13.24□□□□□ -0.29
TMEM87A-205ENST00000562946 ADGRB3O60242 1522 aa13.24□□□□□ -0.29
TMEM87A-205ENST00000562946 SPHKAPQ2M3C7 1700 aa13.24□□□□□ -0.29
TMEM87A-205ENST00000562946 TMEM131LA2VDJ0 1609 aa13.23□□□□□ -0.29
TMEM87A-205ENST00000562946 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
TMEM87A-205ENST00000562946 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
TMEM87A-205ENST00000562946 STRCP1A6NGW2 1772 aa13.21□□□□□ -0.29
TMEM87A-205ENST00000562946 IQSEC2Q5JU85 1478 aa13.21□□□□□ -0.29
TMEM87A-205ENST00000562946 EID1Q9Y6B2 187 aa13.21□□□□□ -0.3
TMEM87A-205ENST00000562946 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
TMEM87A-205ENST00000562946 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
TMEM87A-205ENST00000562946 CPS1P31327 1500 aa13.17□□□□□ -0.3
TMEM87A-205ENST00000562946 KIF1BO60333 1816 aa13.16□□□□□ -0.3
TMEM87A-205ENST00000562946 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
TMEM87A-205ENST00000562946 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
TMEM87A-205ENST00000562946 TRPM2O94759 1503 aa13.15□□□□□ -0.3
TMEM87A-205ENST00000562946 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
TMEM87A-205ENST00000562946 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
TMEM87A-205ENST00000562946 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
TMEM87A-205ENST00000562946 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
TMEM87A-205ENST00000562946 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
TMEM87A-205ENST00000562946 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
TMEM87A-205ENST00000562946 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
TMEM87A-205ENST00000562946 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
TMEM87A-205ENST00000562946 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM87A-205ENST00000562946 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
TMEM87A-205ENST00000562946 MPHOSPH9Q99550 1183 aa13.1□□□□□ -0.31
TMEM87A-205ENST00000562946 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
TMEM87A-205ENST00000562946 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
TMEM87A-205ENST00000562946 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.31
TMEM87A-205ENST00000562946 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
TMEM87A-205ENST00000562946 KCNA6P17658 529 aa13.08□□□□□ -0.32
TMEM87A-205ENST00000562946 BCANQ96GW7 911 aa13.08□□□□□ -0.32
TMEM87A-205ENST00000562946 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
TMEM87A-205ENST00000562946 ADAMTS13Q76LX8 1427 aa13.07□□□□□ -0.32
TMEM87A-205ENST00000562946 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
TMEM87A-205ENST00000562946 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
TMEM87A-205ENST00000562946 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
TMEM87A-205ENST00000562946 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
TMEM87A-205ENST00000562946 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
TMEM87A-205ENST00000562946 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
TMEM87A-205ENST00000562946 PPLO60437 1756 aa13.05□□□□□ -0.32
TMEM87A-205ENST00000562946 SETBP1Q9Y6X0 1596 aa13.04□□□□□ -0.32
TMEM87A-205ENST00000562946 TOM1O60784 492 aa13.04□□□□□ -0.32
TMEM87A-205ENST00000562946 NKTRP30414 1462 aaKnown RBP13.03□□□□□ -0.32
TMEM87A-205ENST00000562946 HRCP23327 699 aa13.03□□□□□ -0.32
TMEM87A-205ENST00000562946 PROSER2Q86WR7 435 aaPredicted RBP13.02□□□□□ -0.33
TMEM87A-205ENST00000562946 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
TMEM87A-205ENST00000562946 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.33
TMEM87A-205ENST00000562946 RPGRIP1LQ68CZ1 1315 aa13.01□□□□□ -0.33
TMEM87A-205ENST00000562946 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
TMEM87A-205ENST00000562946 IFT172Q9UG01 1749 aa13.01□□□□□ -0.33
TMEM87A-205ENST00000562946 SETD1AO15047 1707 aaKnown RBP13□□□□□ -0.33
TMEM87A-205ENST00000562946 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
TMEM87A-205ENST00000562946 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
TMEM87A-205ENST00000562946 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
TMEM87A-205ENST00000562946 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
TMEM87A-205ENST00000562946 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
TMEM87A-205ENST00000562946 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
TMEM87A-205ENST00000562946 METP08581 1390 aa12.98□□□□□ -0.33
TMEM87A-205ENST00000562946 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
TMEM87A-205ENST00000562946 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
TMEM87A-205ENST00000562946 RGL3Q3MIN7 710 aa12.96□□□□□ -0.33
TMEM87A-205ENST00000562946 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.33
TMEM87A-205ENST00000562946 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.33
TMEM87A-205ENST00000562946 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.94□□□□□ -0.34
TMEM87A-205ENST00000562946 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
TMEM87A-205ENST00000562946 HSPA1LP34931 641 aa12.94□□□□□ -0.34
TMEM87A-205ENST00000562946 MSH6P52701 1360 aa12.93□□□□□ -0.34
TMEM87A-205ENST00000562946 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
TMEM87A-205ENST00000562946 ROBO1Q9Y6N7 1651 aa12.91□□□□□ -0.34
TMEM87A-205ENST00000562946 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
TMEM87A-205ENST00000562946 C19orf44Q9H6X5 657 aa12.91□□□□□ -0.34
TMEM87A-205ENST00000562946 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
TMEM87A-205ENST00000562946 PIK3C2GO75747 1445 aa12.89□□□□□ -0.35
TMEM87A-205ENST00000562946 PRAG1Q86YV5 1406 aa12.89□□□□□ -0.35
TMEM87A-205ENST00000562946 C14orf37Q86TY3 774 aa12.88□□□□□ -0.35
TMEM87A-205ENST00000562946 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
TMEM87A-205ENST00000562946 MYOM2P54296 1465 aa12.88□□□□□ -0.35
TMEM87A-205ENST00000562946 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
TMEM87A-205ENST00000562946 PTCH1Q13635 1447 aa12.87□□□□□ -0.35
TMEM87A-205ENST00000562946 ROBO2Q9HCK4 1378 aa12.87□□□□□ -0.35
TMEM87A-205ENST00000562946 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
TMEM87A-205ENST00000562946 ASXL1Q8IXJ9 1541 aa12.86□□□□□ -0.35
TMEM87A-205ENST00000562946 ATF3P18847 181 aa12.86□□□□□ -0.35
TMEM87A-205ENST00000562946 DCCP43146 1447 aa12.86□□□□□ -0.35
TMEM87A-205ENST00000562946 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
TMEM87A-205ENST00000562946 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
TMEM87A-205ENST00000562946 C14orf93Q9H972 538 aaKnown RBP12.85□□□□□ -0.35
TMEM87A-205ENST00000562946 LAMC1P11047 1609 aa12.85□□□□□ -0.35
TMEM87A-205ENST00000562946 TMEM132EQ6IEE7 984 aa12.84□□□□□ -0.35
TMEM87A-205ENST00000562946 PHLPP1O60346 1717 aa12.84□□□□□ -0.35
TMEM87A-205ENST00000562946 TECPR2O15040 1411 aa12.83□□□□□ -0.36
TMEM87A-205ENST00000562946 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
TMEM87A-205ENST00000562946 LRPPRCP42704 1394 aaKnown RBP12.83□□□□□ -0.36
TMEM87A-205ENST00000562946 DHX57Q6P158 1386 aaKnown RBP12.83□□□□□ -0.36
TMEM87A-205ENST00000562946 ABCC11Q96J66 1382 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms