RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 CPS1P31327 1500 aa13.26□□□□□ -0.29
CYLD-204ENST00000562884 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
CYLD-204ENST00000562884 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
CYLD-204ENST00000562884 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
CYLD-204ENST00000562884 KIF1BO60333 1816 aa13.25□□□□□ -0.29
CYLD-204ENST00000562884 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
CYLD-204ENST00000562884 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
CYLD-204ENST00000562884 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
CYLD-204ENST00000562884 TRPM2O94759 1503 aa13.22□□□□□ -0.29
CYLD-204ENST00000562884 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
CYLD-204ENST00000562884 BCANQ96GW7 911 aa13.21□□□□□ -0.29
CYLD-204ENST00000562884 ZFYVE9O95405 1425 aa13.21□□□□□ -0.3
CYLD-204ENST00000562884 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
CYLD-204ENST00000562884 HRCP23327 699 aa13.19□□□□□ -0.3
CYLD-204ENST00000562884 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
CYLD-204ENST00000562884 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
CYLD-204ENST00000562884 CLTCL1P53675 1640 aa13.17□□□□□ -0.3
CYLD-204ENST00000562884 STRCP1A6NGW2 1772 aa13.17□□□□□ -0.3
CYLD-204ENST00000562884 KCNA6P17658 529 aa13.16□□□□□ -0.3
CYLD-204ENST00000562884 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
CYLD-204ENST00000562884 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
CYLD-204ENST00000562884 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
CYLD-204ENST00000562884 TOM1O60784 492 aa13.15□□□□□ -0.3
CYLD-204ENST00000562884 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
CYLD-204ENST00000562884 RAB3GAP2Q9H2M9 1393 aa13.15□□□□□ -0.3
CYLD-204ENST00000562884 CHD2O14647 1828 aaKnown RBP13.15□□□□□ -0.3
CYLD-204ENST00000562884 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
CYLD-204ENST00000562884 CCDC144AA2RUR9 1427 aa13.13□□□□□ -0.31
CYLD-204ENST00000562884 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
CYLD-204ENST00000562884 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
CYLD-204ENST00000562884 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
CYLD-204ENST00000562884 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
CYLD-204ENST00000562884 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
CYLD-204ENST00000562884 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
CYLD-204ENST00000562884 NEXMIFQ5QGS0 1516 aa13.1□□□□□ -0.31
CYLD-204ENST00000562884 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
CYLD-204ENST00000562884 SETBP1Q9Y6X0 1596 aa13.1□□□□□ -0.31
CYLD-204ENST00000562884 XIRP1Q702N8 1843 aaKnown RBP13.09□□□□□ -0.31
CYLD-204ENST00000562884 ADAMTS13Q76LX8 1427 aa13.09□□□□□ -0.31
CYLD-204ENST00000562884 PPLO60437 1756 aa13.09□□□□□ -0.31
CYLD-204ENST00000562884 NCOA3Q9Y6Q9 1424 aa13.07□□□□□ -0.32
CYLD-204ENST00000562884 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
CYLD-204ENST00000562884 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
CYLD-204ENST00000562884 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
CYLD-204ENST00000562884 SCAF1Q9H7N4 1312 aaKnown RBP13.05□□□□□ -0.32
CYLD-204ENST00000562884 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
CYLD-204ENST00000562884 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
CYLD-204ENST00000562884 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
CYLD-204ENST00000562884 MSH6P52701 1360 aa13.04□□□□□ -0.32
CYLD-204ENST00000562884 IFT172Q9UG01 1749 aa13.03□□□□□ -0.32
CYLD-204ENST00000562884 RGL3Q3MIN7 710 aa13.03□□□□□ -0.32
CYLD-204ENST00000562884 C14orf37Q86TY3 774 aa13.01□□□□□ -0.33
CYLD-204ENST00000562884 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
CYLD-204ENST00000562884 XRN1Q8IZH2 1706 aaKnown RBP13□□□□□ -0.33
CYLD-204ENST00000562884 ALKQ9UM73 1620 aa13□□□□□ -0.33
CYLD-204ENST00000562884 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
CYLD-204ENST00000562884 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
CYLD-204ENST00000562884 METP08581 1390 aa12.99□□□□□ -0.33
CYLD-204ENST00000562884 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
CYLD-204ENST00000562884 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
CYLD-204ENST00000562884 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
CYLD-204ENST00000562884 ATF3P18847 181 aa12.97□□□□□ -0.33
CYLD-204ENST00000562884 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
CYLD-204ENST00000562884 SLAIN2Q9P270 581 aa12.97□□□□□ -0.33
CYLD-204ENST00000562884 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.33
CYLD-204ENST00000562884 ADGRF5Q8IZF2 1346 aa12.96□□□□□ -0.33
CYLD-204ENST00000562884 HSPA1LP34931 641 aa12.96□□□□□ -0.33
CYLD-204ENST00000562884 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.33
CYLD-204ENST00000562884 MYOM2P54296 1465 aa12.96□□□□□ -0.34
CYLD-204ENST00000562884 DCCP43146 1447 aa12.96□□□□□ -0.34
CYLD-204ENST00000562884 PIK3C2GO75747 1445 aa12.95□□□□□ -0.34
CYLD-204ENST00000562884 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
CYLD-204ENST00000562884 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
CYLD-204ENST00000562884 LAMC1P11047 1609 aa12.95□□□□□ -0.34
CYLD-204ENST00000562884 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
CYLD-204ENST00000562884 NRXN1Q9ULB1 1477 aa12.93□□□□□ -0.34
CYLD-204ENST00000562884 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
CYLD-204ENST00000562884 ADGRL3Q9HAR2 1447 aa12.91□□□□□ -0.34
CYLD-204ENST00000562884 DCAF11Q8TEB1 546 aa12.91□□□□□ -0.34
CYLD-204ENST00000562884 LRPPRCP42704 1394 aaKnown RBP12.91□□□□□ -0.34
CYLD-204ENST00000562884 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
CYLD-204ENST00000562884 ABCC11Q96J66 1382 aa12.91□□□□□ -0.34
CYLD-204ENST00000562884 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
CYLD-204ENST00000562884 SIRT1Q96EB6 747 aa12.9□□□□□ -0.34
CYLD-204ENST00000562884 TECPR2O15040 1411 aa12.89□□□□□ -0.35
CYLD-204ENST00000562884 ROBO2Q9HCK4 1378 aa12.89□□□□□ -0.35
CYLD-204ENST00000562884 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
CYLD-204ENST00000562884 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
CYLD-204ENST00000562884 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
CYLD-204ENST00000562884 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
CYLD-204ENST00000562884 CFAP70Q5T0N1 1121 aa12.87□□□□□ -0.35
CYLD-204ENST00000562884 TMEM132EQ6IEE7 984 aa12.87□□□□□ -0.35
CYLD-204ENST00000562884 STK26Q9P289 416 aa12.87□□□□□ -0.35
CYLD-204ENST00000562884 DISP3Q9P2K9 1392 aa12.85□□□□□ -0.35
CYLD-204ENST00000562884 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
CYLD-204ENST00000562884 MST1RQ04912 1400 aa12.85□□□□□ -0.35
CYLD-204ENST00000562884 BRINP3Q76B58 766 aa12.84□□□□□ -0.35
CYLD-204ENST00000562884 KIAA1210Q9ULL0 1709 aa12.84□□□□□ -0.35
CYLD-204ENST00000562884 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
CYLD-204ENST00000562884 DLC1Q96QB1 1528 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms