RNA–Protein interactions for RNA: ENST00000562838.1

AC009065.4-203, humanhuman

TSL 2 BASIC

Gene AC009065.4, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.4-203ENST00000562838 IQGAP1P46940 1657 aa29.33■■■□□ 2.29
AC009065.4-203ENST00000562838 CCDC144AA2RUR9 1427 aa29.31■■■□□ 2.28
AC009065.4-203ENST00000562838 RIMS2Q9UQ26 1411 aa29.31■■■□□ 2.28
AC009065.4-203ENST00000562838 PPP1R15AO75807 674 aaPredicted RBP29.31■■■□□ 2.28
AC009065.4-203ENST00000562838 HDGFP51858 240 aaKnown RBP29.31■■■□□ 2.28
AC009065.4-203ENST00000562838 NUTM2DQ5VT03 806 aaPredicted RBP29.29■■■□□ 2.28
AC009065.4-203ENST00000562838 BCANQ96GW7 911 aa29.29■■■□□ 2.28
AC009065.4-203ENST00000562838 SENP3Q9H4L4 574 aaPredicted RBP29.29■■■□□ 2.28
AC009065.4-203ENST00000562838 MED14O60244 1454 aa29.29■■■□□ 2.28
AC009065.4-203ENST00000562838 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.26■■■□□ 2.27
AC009065.4-203ENST00000562838 ZFYVE9O95405 1425 aa29.25■■■□□ 2.27
AC009065.4-203ENST00000562838 PCGF6Q9BYE7 350 aa29.2■■■□□ 2.26
AC009065.4-203ENST00000562838 RGL3Q3MIN7 710 aa29.19■■■□□ 2.26
AC009065.4-203ENST00000562838 ZNF335Q9H4Z2 1342 aaPredicted RBP29.19■■■□□ 2.26
AC009065.4-203ENST00000562838 ANKRD30BQ9BXX2 1392 aa29.17■■■□□ 2.26
AC009065.4-203ENST00000562838 PLEKHG1Q9ULL1 1385 aa29.15■■■□□ 2.26
AC009065.4-203ENST00000562838 SLC26A8Q96RN1 970 aa29.15■■■□□ 2.26
AC009065.4-203ENST00000562838 NEXMIFQ5QGS0 1516 aa29.15■■■□□ 2.26
AC009065.4-203ENST00000562838 PPLO60437 1756 aa29.12■■■□□ 2.25
AC009065.4-203ENST00000562838 RPGRIP1LQ68CZ1 1315 aa29.11■■■□□ 2.25
AC009065.4-203ENST00000562838 SPATA31E1Q6ZUB1 1445 aa29.1■■■□□ 2.25
AC009065.4-203ENST00000562838 LTBP4Q8N2S1 1624 aa29.09■■■□□ 2.25
AC009065.4-203ENST00000562838 VGFO15240 615 aaPredicted RBP29.07■■■□□ 2.24
AC009065.4-203ENST00000562838 DHX57Q6P158 1386 aaKnown RBP29.04■■■□□ 2.24
AC009065.4-203ENST00000562838 STRCP1A6NGW2 1772 aa29.04■■■□□ 2.24
AC009065.4-203ENST00000562838 IFT172Q9UG01 1749 aa29.03■■■□□ 2.24
AC009065.4-203ENST00000562838 TBX22Q9Y458 520 aa29.01■■■□□ 2.23
AC009065.4-203ENST00000562838 ADAMTS13Q76LX8 1427 aa29.01■■■□□ 2.23
AC009065.4-203ENST00000562838 DIP2AQ14689 1571 aa29.01■■■□□ 2.23
AC009065.4-203ENST00000562838 CPS1P31327 1500 aa29■■■□□ 2.23
AC009065.4-203ENST00000562838 NRXN3Q9Y4C0 1643 aa29■■■□□ 2.23
AC009065.4-203ENST00000562838 SETBP1Q9Y6X0 1596 aa29■■■□□ 2.23
AC009065.4-203ENST00000562838 IQSEC2Q5JU85 1478 aa28.98■■■□□ 2.23
AC009065.4-203ENST00000562838 CHD2O14647 1828 aaKnown RBP28.97■■■□□ 2.23
AC009065.4-203ENST00000562838 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
AC009065.4-203ENST00000562838 KCNA6P17658 529 aa28.96■■■□□ 2.23
AC009065.4-203ENST00000562838 NEUROD1Q13562 356 aa28.93■■■□□ 2.22
AC009065.4-203ENST00000562838 SIN3AQ96ST3 1273 aa28.93■■■□□ 2.22
AC009065.4-203ENST00000562838 KDM2AQ9Y2K7 1162 aa28.93■■■□□ 2.22
AC009065.4-203ENST00000562838 DCAF11Q8TEB1 546 aa28.91■■■□□ 2.22
AC009065.4-203ENST00000562838 NWD1Q149M9 1564 aa28.9■■■□□ 2.22
AC009065.4-203ENST00000562838 ALKQ9UM73 1620 aa28.9■■■□□ 2.22
AC009065.4-203ENST00000562838 PIK3R4Q99570 1358 aa28.89■■■□□ 2.22
AC009065.4-203ENST00000562838 PROSER2Q86WR7 435 aaPredicted RBP28.89■■■□□ 2.22
AC009065.4-203ENST00000562838 LRRC7Q96NW7 1537 aa28.88■■■□□ 2.21
AC009065.4-203ENST00000562838 MYOM2P54296 1465 aa28.87■■■□□ 2.21
AC009065.4-203ENST00000562838 METP08581 1390 aa28.87■■■□□ 2.21
AC009065.4-203ENST00000562838 SETD1AO15047 1707 aaKnown RBP28.86■■■□□ 2.21
AC009065.4-203ENST00000562838 AMOTL2Q9Y2J4 779 aa28.86■■■□□ 2.21
AC009065.4-203ENST00000562838 NKTRP30414 1462 aaKnown RBP28.85■■■□□ 2.21
AC009065.4-203ENST00000562838 RBM33Q96EV2 1170 aaKnown RBP28.84■■■□□ 2.21
AC009065.4-203ENST00000562838 PIK3C2GO75747 1445 aa28.84■■■□□ 2.21
AC009065.4-203ENST00000562838 PTPRUQ92729 1446 aa28.84■■■□□ 2.21
AC009065.4-203ENST00000562838 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
AC009065.4-203ENST00000562838 TMEM94Q12767 1356 aa28.8■■■□□ 2.2
AC009065.4-203ENST00000562838 XRN1Q8IZH2 1706 aaKnown RBP28.79■■■□□ 2.2
AC009065.4-203ENST00000562838 NRXN1Q9ULB1 1477 aa28.78■■■□□ 2.2
AC009065.4-203ENST00000562838 UBAP1LF5GYI3 381 aa28.78■■■□□ 2.2
AC009065.4-203ENST00000562838 STAC3Q96MF2 364 aa28.78■■■□□ 2.2
AC009065.4-203ENST00000562838 LAMC1P11047 1609 aa28.77■■■□□ 2.2
AC009065.4-203ENST00000562838 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
AC009065.4-203ENST00000562838 C14orf37Q86TY3 774 aa28.77■■■□□ 2.2
AC009065.4-203ENST00000562838 TMEM132EQ6IEE7 984 aa28.76■■■□□ 2.19
AC009065.4-203ENST00000562838 C14orf93Q9H972 538 aaKnown RBP28.75■■■□□ 2.19
AC009065.4-203ENST00000562838 L3MBTL2Q969R5 705 aa28.74■■■□□ 2.19
AC009065.4-203ENST00000562838 STK26Q9P289 416 aa28.74■■■□□ 2.19
AC009065.4-203ENST00000562838 TOM1O60784 492 aa28.71■■■□□ 2.19
AC009065.4-203ENST00000562838 ASXL1Q8IXJ9 1541 aa28.7■■■□□ 2.19
AC009065.4-203ENST00000562838 SCAF1Q9H7N4 1312 aaKnown RBP28.69■■■□□ 2.18
AC009065.4-203ENST00000562838 CCER1Q8TC90 406 aaPredicted RBP28.69■■■□□ 2.18
AC009065.4-203ENST00000562838 MSH6P52701 1360 aa28.69■■■□□ 2.18
AC009065.4-203ENST00000562838 TONSLQ96HA7 1378 aa28.69■■■□□ 2.18
AC009065.4-203ENST00000562838 LRPPRCP42704 1394 aaKnown RBP28.66■■■□□ 2.18
AC009065.4-203ENST00000562838 PIP4K2BP78356 416 aa28.66■■■□□ 2.18
AC009065.4-203ENST00000562838 YTHDC2Q9H6S0 1430 aaKnown RBP28.66■■■□□ 2.18
AC009065.4-203ENST00000562838 ROBO2Q9HCK4 1378 aa28.64■■■□□ 2.18
AC009065.4-203ENST00000562838 PTCH1Q13635 1447 aa28.64■■■□□ 2.18
AC009065.4-203ENST00000562838 KNDC1Q76NI1 1749 aa28.63■■■□□ 2.17
AC009065.4-203ENST00000562838 PRAG1Q86YV5 1406 aa28.63■■■□□ 2.17
AC009065.4-203ENST00000562838 NCOA3Q9Y6Q9 1424 aa28.63■■■□□ 2.17
AC009065.4-203ENST00000562838 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.61■■■□□ 2.17
AC009065.4-203ENST00000562838 KIAA1210Q9ULL0 1709 aa28.6■■■□□ 2.17
AC009065.4-203ENST00000562838 ABCC11Q96J66 1382 aa28.6■■■□□ 2.17
AC009065.4-203ENST00000562838 C19orf44Q9H6X5 657 aa28.59■■■□□ 2.17
AC009065.4-203ENST00000562838 ATF3P18847 181 aa28.58■■■□□ 2.17
AC009065.4-203ENST00000562838 CLSPNQ9HAW4 1339 aa28.58■■■□□ 2.17
AC009065.4-203ENST00000562838 ADGRB1O14514 1584 aa28.58■■■□□ 2.17
AC009065.4-203ENST00000562838 NALCNQ8IZF0 1738 aa28.57■■■□□ 2.16
AC009065.4-203ENST00000562838 WAPLQ7Z5K2 1190 aa28.57■■■□□ 2.16
AC009065.4-203ENST00000562838 TRAK1Q9UPV9 953 aa28.57■■■□□ 2.16
AC009065.4-203ENST00000562838 DISP3Q9P2K9 1392 aa28.57■■■□□ 2.16
AC009065.4-203ENST00000562838 TECPR2O15040 1411 aa28.56■■■□□ 2.16
AC009065.4-203ENST00000562838 ADGRL3Q9HAR2 1447 aa28.54■■■□□ 2.16
AC009065.4-203ENST00000562838 NBPF1Q3BBV0 1214 aa28.53■■■□□ 2.16
AC009065.4-203ENST00000562838 CADPS2Q86UW7 1296 aa28.53■■■□□ 2.16
AC009065.4-203ENST00000562838 POGKQ9P215 609 aa28.53■■■□□ 2.16
AC009065.4-203ENST00000562838 SAFB2Q14151 953 aaKnown RBP eCLIP28.52■■■□□ 2.16
AC009065.4-203ENST00000562838 PLEKHH1Q9ULM0 1364 aa28.51■■■□□ 2.16
AC009065.4-203ENST00000562838 TRPM1Q7Z4N2 1603 aa28.51■■■□□ 2.15
AC009065.4-203ENST00000562838 PRAM1Q96QH2 718 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms