RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 TMEM2Q9UHN6 1383 aa18.57■□□□□ 0.56
CDH11-204ENST00000562712 HDGFP51858 240 aaKnown RBP18.57■□□□□ 0.56
CDH11-204ENST00000562712 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
CDH11-204ENST00000562712 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
CDH11-204ENST00000562712 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
CDH11-204ENST00000562712 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
CDH11-204ENST00000562712 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
CDH11-204ENST00000562712 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
CDH11-204ENST00000562712 EID1Q9Y6B2 187 aa18.54■□□□□ 0.56
CDH11-204ENST00000562712 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
CDH11-204ENST00000562712 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
CDH11-204ENST00000562712 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
CDH11-204ENST00000562712 TXNDC2Q86VQ3 553 aa18.53■□□□□ 0.56
CDH11-204ENST00000562712 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDH11-204ENST00000562712 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
CDH11-204ENST00000562712 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
CDH11-204ENST00000562712 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
CDH11-204ENST00000562712 LTKP29376 864 aa18.52■□□□□ 0.56
CDH11-204ENST00000562712 CPS1P31327 1500 aa18.52■□□□□ 0.56
CDH11-204ENST00000562712 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
CDH11-204ENST00000562712 RIMS2Q9UQ26 1411 aa18.5■□□□□ 0.55
CDH11-204ENST00000562712 NEUROD1Q13562 356 aa18.5■□□□□ 0.55
CDH11-204ENST00000562712 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
CDH11-204ENST00000562712 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
CDH11-204ENST00000562712 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
CDH11-204ENST00000562712 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
CDH11-204ENST00000562712 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
CDH11-204ENST00000562712 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
CDH11-204ENST00000562712 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
CDH11-204ENST00000562712 PPLO60437 1756 aa18.42■□□□□ 0.54
CDH11-204ENST00000562712 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
CDH11-204ENST00000562712 XIRP1Q702N8 1843 aaKnown RBP18.41■□□□□ 0.54
CDH11-204ENST00000562712 ALKQ9UM73 1620 aa18.41■□□□□ 0.54
CDH11-204ENST00000562712 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
CDH11-204ENST00000562712 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
CDH11-204ENST00000562712 LRRC7Q96NW7 1537 aa18.39■□□□□ 0.54
CDH11-204ENST00000562712 BCANQ96GW7 911 aa18.39■□□□□ 0.53
CDH11-204ENST00000562712 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
CDH11-204ENST00000562712 ADGRF5Q8IZF2 1346 aa18.39■□□□□ 0.53
CDH11-204ENST00000562712 MYOM2P54296 1465 aa18.38■□□□□ 0.53
CDH11-204ENST00000562712 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
CDH11-204ENST00000562712 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
CDH11-204ENST00000562712 NWD1Q149M9 1564 aa18.36■□□□□ 0.53
CDH11-204ENST00000562712 NRXN1Q9ULB1 1477 aa18.36■□□□□ 0.53
CDH11-204ENST00000562712 SETBP1Q9Y6X0 1596 aa18.35■□□□□ 0.53
CDH11-204ENST00000562712 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
CDH11-204ENST00000562712 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
CDH11-204ENST00000562712 PIK3C2GO75747 1445 aa18.33■□□□□ 0.53
CDH11-204ENST00000562712 ADAMTS13Q76LX8 1427 aa18.33■□□□□ 0.53
CDH11-204ENST00000562712 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
CDH11-204ENST00000562712 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
CDH11-204ENST00000562712 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
CDH11-204ENST00000562712 CHD2O14647 1828 aaKnown RBP18.3■□□□□ 0.52
CDH11-204ENST00000562712 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
CDH11-204ENST00000562712 PIK3R4Q99570 1358 aa18.3■□□□□ 0.52
CDH11-204ENST00000562712 NKTRP30414 1462 aaKnown RBP18.28■□□□□ 0.52
CDH11-204ENST00000562712 CFAP70Q5T0N1 1121 aa18.28■□□□□ 0.52
CDH11-204ENST00000562712 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
CDH11-204ENST00000562712 KCNA6P17658 529 aa18.26■□□□□ 0.51
CDH11-204ENST00000562712 METP08581 1390 aa18.26■□□□□ 0.51
CDH11-204ENST00000562712 TOM1O60784 492 aa18.24■□□□□ 0.51
CDH11-204ENST00000562712 NBPF8Q3BBV2 869 aa18.24■□□□□ 0.51
CDH11-204ENST00000562712 LAMC1P11047 1609 aa18.23■□□□□ 0.51
CDH11-204ENST00000562712 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
CDH11-204ENST00000562712 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
CDH11-204ENST00000562712 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
CDH11-204ENST00000562712 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
CDH11-204ENST00000562712 TMEM94Q12767 1356 aa18.21■□□□□ 0.51
CDH11-204ENST00000562712 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
CDH11-204ENST00000562712 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
CDH11-204ENST00000562712 NBPF1Q3BBV0 1214 aa18.2■□□□□ 0.5
CDH11-204ENST00000562712 XRN1Q8IZH2 1706 aaKnown RBP18.19■□□□□ 0.5
CDH11-204ENST00000562712 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
CDH11-204ENST00000562712 LRPPRCP42704 1394 aaKnown RBP18.18■□□□□ 0.5
CDH11-204ENST00000562712 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
CDH11-204ENST00000562712 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
CDH11-204ENST00000562712 YTHDC2Q9H6S0 1430 aaKnown RBP18.17■□□□□ 0.5
CDH11-204ENST00000562712 HSPA1LP34931 641 aa18.17■□□□□ 0.5
CDH11-204ENST00000562712 SIRT1Q96EB6 747 aa18.17■□□□□ 0.5
CDH11-204ENST00000562712 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
CDH11-204ENST00000562712 STK26Q9P289 416 aa18.16■□□□□ 0.5
CDH11-204ENST00000562712 ASXL1Q8IXJ9 1541 aa18.16■□□□□ 0.5
CDH11-204ENST00000562712 PROSER2Q86WR7 435 aaPredicted RBP18.15■□□□□ 0.5
CDH11-204ENST00000562712 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
CDH11-204ENST00000562712 ROBO1Q9Y6N7 1651 aa18.14■□□□□ 0.49
CDH11-204ENST00000562712 TECPR2O15040 1411 aa18.14■□□□□ 0.49
CDH11-204ENST00000562712 RALGAPBQ86X10 1494 aa18.14■□□□□ 0.49
CDH11-204ENST00000562712 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
CDH11-204ENST00000562712 DISP3Q9P2K9 1392 aa18.13■□□□□ 0.49
CDH11-204ENST00000562712 MED1Q15648 1581 aaPredicted RBP18.13■□□□□ 0.49
CDH11-204ENST00000562712 TRAK1Q9UPV9 953 aa18.12■□□□□ 0.49
CDH11-204ENST00000562712 PTCH1Q13635 1447 aa18.12■□□□□ 0.49
CDH11-204ENST00000562712 RBM33Q96EV2 1170 aaKnown RBP18.11■□□□□ 0.49
CDH11-204ENST00000562712 CARD11Q9BXL7 1154 aa18.11■□□□□ 0.49
CDH11-204ENST00000562712 ROBO2Q9HCK4 1378 aa18.11■□□□□ 0.49
CDH11-204ENST00000562712 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
CDH11-204ENST00000562712 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.1■□□□□ 0.49
CDH11-204ENST00000562712 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
CDH11-204ENST00000562712 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
CDH11-204ENST00000562712 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms