RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 RAB3GAP2Q9H2M9 1393 aa22.98■■□□□ 1.27
CCNDBP1-203ENST00000562553 STRCP1A6NGW2 1772 aa22.97■■□□□ 1.27
CCNDBP1-203ENST00000562553 RIMS2Q9UQ26 1411 aa22.97■■□□□ 1.27
CCNDBP1-203ENST00000562553 DISP3Q9P2K9 1392 aa22.95■■□□□ 1.26
CCNDBP1-203ENST00000562553 FOXD1Q16676 465 aa22.94■■□□□ 1.26
CCNDBP1-203ENST00000562553 KIF1BO60333 1816 aa22.94■■□□□ 1.26
CCNDBP1-203ENST00000562553 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
CCNDBP1-203ENST00000562553 TOM1O60784 492 aa22.91■■□□□ 1.26
CCNDBP1-203ENST00000562553 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
CCNDBP1-203ENST00000562553 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
CCNDBP1-203ENST00000562553 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.25
CCNDBP1-203ENST00000562553 PPP1R15AO75807 674 aaPredicted RBP22.87■■□□□ 1.25
CCNDBP1-203ENST00000562553 SLC26A8Q96RN1 970 aa22.87■■□□□ 1.25
CCNDBP1-203ENST00000562553 ACIN1Q9UKV3 1341 aaKnown RBP22.85■■□□□ 1.25
CCNDBP1-203ENST00000562553 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.85■■□□□ 1.25
CCNDBP1-203ENST00000562553 NEXMIFQ5QGS0 1516 aa22.84■■□□□ 1.25
CCNDBP1-203ENST00000562553 LRRC7Q96NW7 1537 aa22.84■■□□□ 1.25
CCNDBP1-203ENST00000562553 HDGFP51858 240 aaKnown RBP22.84■■□□□ 1.25
CCNDBP1-203ENST00000562553 ILDR2Q71H61 639 aa22.84■■□□□ 1.25
CCNDBP1-203ENST00000562553 ALKQ9UM73 1620 aa22.83■■□□□ 1.25
CCNDBP1-203ENST00000562553 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.25
CCNDBP1-203ENST00000562553 BCANQ96GW7 911 aa22.83■■□□□ 1.25
CCNDBP1-203ENST00000562553 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
CCNDBP1-203ENST00000562553 ADAMTS13Q76LX8 1427 aa22.81■■□□□ 1.24
CCNDBP1-203ENST00000562553 PIP4K2BP78356 416 aa22.8■■□□□ 1.24
CCNDBP1-203ENST00000562553 CCDC144AA2RUR9 1427 aa22.8■■□□□ 1.24
CCNDBP1-203ENST00000562553 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
CCNDBP1-203ENST00000562553 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
CCNDBP1-203ENST00000562553 NWD1Q149M9 1564 aa22.79■■□□□ 1.24
CCNDBP1-203ENST00000562553 HRCP23327 699 aa22.78■■□□□ 1.24
CCNDBP1-203ENST00000562553 HSPA1LP34931 641 aa22.78■■□□□ 1.24
CCNDBP1-203ENST00000562553 DIP2AQ14689 1571 aa22.78■■□□□ 1.24
CCNDBP1-203ENST00000562553 PPLO60437 1756 aa22.78■■□□□ 1.24
CCNDBP1-203ENST00000562553 SCAF1Q9H7N4 1312 aaKnown RBP22.78■■□□□ 1.24
CCNDBP1-203ENST00000562553 SETBP1Q9Y6X0 1596 aa22.76■■□□□ 1.23
CCNDBP1-203ENST00000562553 KCNA6P17658 529 aa22.75■■□□□ 1.23
CCNDBP1-203ENST00000562553 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
CCNDBP1-203ENST00000562553 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
CCNDBP1-203ENST00000562553 SOCS7O14512 581 aa22.73■■□□□ 1.23
CCNDBP1-203ENST00000562553 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
CCNDBP1-203ENST00000562553 NKTRP30414 1462 aaKnown RBP22.72■■□□□ 1.23
CCNDBP1-203ENST00000562553 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
CCNDBP1-203ENST00000562553 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
CCNDBP1-203ENST00000562553 SETD1AO15047 1707 aaKnown RBP22.68■■□□□ 1.22
CCNDBP1-203ENST00000562553 PTPRUQ92729 1446 aa22.68■■□□□ 1.22
CCNDBP1-203ENST00000562553 TMEM94Q12767 1356 aa22.68■■□□□ 1.22
CCNDBP1-203ENST00000562553 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
CCNDBP1-203ENST00000562553 RBM33Q96EV2 1170 aaKnown RBP22.67■■□□□ 1.22
CCNDBP1-203ENST00000562553 PIK3R4Q99570 1358 aa22.66■■□□□ 1.22
CCNDBP1-203ENST00000562553 PROSER2Q86WR7 435 aaPredicted RBP22.66■■□□□ 1.22
CCNDBP1-203ENST00000562553 MED1Q15648 1581 aaPredicted RBP22.66■■□□□ 1.22
CCNDBP1-203ENST00000562553 XRN1Q8IZH2 1706 aaKnown RBP22.65■■□□□ 1.22
CCNDBP1-203ENST00000562553 VGFO15240 615 aaPredicted RBP22.65■■□□□ 1.22
CCNDBP1-203ENST00000562553 METP08581 1390 aa22.64■■□□□ 1.22
CCNDBP1-203ENST00000562553 ADGRF5Q8IZF2 1346 aa22.62■■□□□ 1.21
CCNDBP1-203ENST00000562553 AMOTL2Q9Y2J4 779 aa22.61■■□□□ 1.21
CCNDBP1-203ENST00000562553 FAM135BQ49AJ0 1406 aa22.58■■□□□ 1.21
CCNDBP1-203ENST00000562553 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
CCNDBP1-203ENST00000562553 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
CCNDBP1-203ENST00000562553 MYOM2P54296 1465 aa22.54■■□□□ 1.2
CCNDBP1-203ENST00000562553 MSH6P52701 1360 aa22.53■■□□□ 1.2
CCNDBP1-203ENST00000562553 NRXN1Q9ULB1 1477 aa22.53■■□□□ 1.2
CCNDBP1-203ENST00000562553 ASXL1Q8IXJ9 1541 aa22.52■■□□□ 1.2
CCNDBP1-203ENST00000562553 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.52■■□□□ 1.2
CCNDBP1-203ENST00000562553 NCOA3Q9Y6Q9 1424 aa22.52■■□□□ 1.2
CCNDBP1-203ENST00000562553 ROBO1Q9Y6N7 1651 aa22.49■■□□□ 1.19
CCNDBP1-203ENST00000562553 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
CCNDBP1-203ENST00000562553 NALCNQ8IZF0 1738 aa22.48■■□□□ 1.19
CCNDBP1-203ENST00000562553 PTCH1Q13635 1447 aa22.48■■□□□ 1.19
CCNDBP1-203ENST00000562553 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
CCNDBP1-203ENST00000562553 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
CCNDBP1-203ENST00000562553 ROBO2Q9HCK4 1378 aa22.47■■□□□ 1.19
CCNDBP1-203ENST00000562553 LAMC1P11047 1609 aa22.46■■□□□ 1.19
CCNDBP1-203ENST00000562553 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
CCNDBP1-203ENST00000562553 TMEM132EQ6IEE7 984 aa22.44■■□□□ 1.18
CCNDBP1-203ENST00000562553 KNDC1Q76NI1 1749 aa22.44■■□□□ 1.18
CCNDBP1-203ENST00000562553 C19orf44Q9H6X5 657 aa22.44■■□□□ 1.18
CCNDBP1-203ENST00000562553 CFAP70Q5T0N1 1121 aa22.43■■□□□ 1.18
CCNDBP1-203ENST00000562553 DCAF11Q8TEB1 546 aa22.43■■□□□ 1.18
CCNDBP1-203ENST00000562553 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
CCNDBP1-203ENST00000562553 KDM2AQ9Y2K7 1162 aa22.43■■□□□ 1.18
CCNDBP1-203ENST00000562553 ADGRL3Q9HAR2 1447 aa22.42■■□□□ 1.18
CCNDBP1-203ENST00000562553 SLAIN2Q9P270 581 aa22.42■■□□□ 1.18
CCNDBP1-203ENST00000562553 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
CCNDBP1-203ENST00000562553 DCCP43146 1447 aa22.4■■□□□ 1.18
CCNDBP1-203ENST00000562553 STK26Q9P289 416 aa22.4■■□□□ 1.18
CCNDBP1-203ENST00000562553 TECPR2O15040 1411 aa22.4■■□□□ 1.18
CCNDBP1-203ENST00000562553 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
CCNDBP1-203ENST00000562553 ATF3P18847 181 aa22.39■■□□□ 1.17
CCNDBP1-203ENST00000562553 CADPS2Q86UW7 1296 aa22.39■■□□□ 1.17
CCNDBP1-203ENST00000562553 ABCC11Q96J66 1382 aa22.38■■□□□ 1.17
CCNDBP1-203ENST00000562553 SIN3AQ96ST3 1273 aa22.37■■□□□ 1.17
CCNDBP1-203ENST00000562553 ADGRB1O14514 1584 aa22.37■■□□□ 1.17
CCNDBP1-203ENST00000562553 PHLPP1O60346 1717 aa22.35■■□□□ 1.17
CCNDBP1-203ENST00000562553 MST1RQ04912 1400 aa22.35■■□□□ 1.17
CCNDBP1-203ENST00000562553 RGS17Q9UGC6 210 aaPredicted RBP22.35■■□□□ 1.17
CCNDBP1-203ENST00000562553 PLEKHH1Q9ULM0 1364 aa22.35■■□□□ 1.17
CCNDBP1-203ENST00000562553 WAPLQ7Z5K2 1190 aa22.33■■□□□ 1.17
CCNDBP1-203ENST00000562553 STAC3Q96MF2 364 aa22.33■■□□□ 1.17
CCNDBP1-203ENST00000562553 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms