RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 CPS1P31327 1500 aa28.9■■■□□ 2.22
TMEM249-202ENST00000562477 SLC26A8Q96RN1 970 aa28.9■■■□□ 2.22
TMEM249-202ENST00000562477 TRPM2O94759 1503 aa28.89■■■□□ 2.22
TMEM249-202ENST00000562477 STRCP1A6NGW2 1772 aa28.89■■■□□ 2.22
TMEM249-202ENST00000562477 CLTCL1P53675 1640 aa28.89■■■□□ 2.22
TMEM249-202ENST00000562477 PPP1R15AO75807 674 aaPredicted RBP28.88■■■□□ 2.21
TMEM249-202ENST00000562477 BCANQ96GW7 911 aa28.86■■■□□ 2.21
TMEM249-202ENST00000562477 RAB3GAP2Q9H2M9 1393 aa28.86■■■□□ 2.21
TMEM249-202ENST00000562477 MPHOSPH9Q99550 1183 aa28.85■■■□□ 2.21
TMEM249-202ENST00000562477 PLEKHG1Q9ULL1 1385 aa28.85■■■□□ 2.21
TMEM249-202ENST00000562477 HDGFP51858 240 aaKnown RBP28.83■■■□□ 2.21
TMEM249-202ENST00000562477 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.83■■■□□ 2.21
TMEM249-202ENST00000562477 ZNF326Q5BKZ1 582 aaKnown RBP28.81■■■□□ 2.2
TMEM249-202ENST00000562477 LRRC7Q96NW7 1537 aa28.8■■■□□ 2.2
TMEM249-202ENST00000562477 UBAP1LF5GYI3 381 aa28.8■■■□□ 2.2
TMEM249-202ENST00000562477 KCNA6P17658 529 aa28.75■■■□□ 2.19
TMEM249-202ENST00000562477 ADAMTS13Q76LX8 1427 aa28.75■■■□□ 2.19
TMEM249-202ENST00000562477 KIF1BO60333 1816 aa28.71■■■□□ 2.19
TMEM249-202ENST00000562477 TBX22Q9Y458 520 aa28.71■■■□□ 2.19
TMEM249-202ENST00000562477 NEXMIFQ5QGS0 1516 aa28.7■■■□□ 2.19
TMEM249-202ENST00000562477 RBM33Q96EV2 1170 aaKnown RBP28.69■■■□□ 2.18
TMEM249-202ENST00000562477 ACIN1Q9UKV3 1341 aaKnown RBP28.69■■■□□ 2.18
TMEM249-202ENST00000562477 CCDC144AA2RUR9 1427 aa28.67■■■□□ 2.18
TMEM249-202ENST00000562477 NWD1Q149M9 1564 aa28.67■■■□□ 2.18
TMEM249-202ENST00000562477 ALKQ9UM73 1620 aa28.65■■■□□ 2.18
TMEM249-202ENST00000562477 TMEM94Q12767 1356 aa28.65■■■□□ 2.18
TMEM249-202ENST00000562477 PIP4K2BP78356 416 aa28.65■■■□□ 2.18
TMEM249-202ENST00000562477 PROSER2Q86WR7 435 aaPredicted RBP28.65■■■□□ 2.18
TMEM249-202ENST00000562477 NRXN3Q9Y4C0 1643 aa28.65■■■□□ 2.18
TMEM249-202ENST00000562477 TOM1O60784 492 aa28.64■■■□□ 2.18
TMEM249-202ENST00000562477 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.17
TMEM249-202ENST00000562477 SCAF1Q9H7N4 1312 aaKnown RBP28.63■■■□□ 2.17
TMEM249-202ENST00000562477 DIP2AQ14689 1571 aa28.62■■■□□ 2.17
TMEM249-202ENST00000562477 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
TMEM249-202ENST00000562477 SETBP1Q9Y6X0 1596 aa28.62■■■□□ 2.17
TMEM249-202ENST00000562477 CHD2O14647 1828 aaKnown RBP28.61■■■□□ 2.17
TMEM249-202ENST00000562477 PTPRUQ92729 1446 aa28.6■■■□□ 2.17
TMEM249-202ENST00000562477 HRCP23327 699 aa28.6■■■□□ 2.17
TMEM249-202ENST00000562477 RGL3Q3MIN7 710 aa28.6■■■□□ 2.17
TMEM249-202ENST00000562477 SPATA31E1Q6ZUB1 1445 aa28.6■■■□□ 2.17
TMEM249-202ENST00000562477 RPGRIP1LQ68CZ1 1315 aa28.58■■■□□ 2.17
TMEM249-202ENST00000562477 METP08581 1390 aa28.57■■■□□ 2.16
TMEM249-202ENST00000562477 PIK3R4Q99570 1358 aa28.57■■■□□ 2.16
TMEM249-202ENST00000562477 VGFO15240 615 aaPredicted RBP28.55■■■□□ 2.16
TMEM249-202ENST00000562477 AMOTL2Q9Y2J4 779 aa28.55■■■□□ 2.16
TMEM249-202ENST00000562477 PPLO60437 1756 aa28.53■■■□□ 2.16
TMEM249-202ENST00000562477 ANKRD30BQ9BXX2 1392 aa28.52■■■□□ 2.16
TMEM249-202ENST00000562477 ADGRF5Q8IZF2 1346 aa28.5■■■□□ 2.15
TMEM249-202ENST00000562477 HSPA1LP34931 641 aa28.49■■■□□ 2.15
TMEM249-202ENST00000562477 XRN1Q8IZH2 1706 aaKnown RBP28.46■■■□□ 2.15
TMEM249-202ENST00000562477 MSH6P52701 1360 aa28.45■■■□□ 2.14
TMEM249-202ENST00000562477 SETD1AO15047 1707 aaKnown RBP28.43■■■□□ 2.14
TMEM249-202ENST00000562477 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
TMEM249-202ENST00000562477 IFT172Q9UG01 1749 aa28.42■■■□□ 2.14
TMEM249-202ENST00000562477 NCOA3Q9Y6Q9 1424 aa28.4■■■□□ 2.14
TMEM249-202ENST00000562477 PIK3C2GO75747 1445 aa28.35■■■□□ 2.13
TMEM249-202ENST00000562477 FAM135BQ49AJ0 1406 aa28.35■■■□□ 2.13
TMEM249-202ENST00000562477 C19orf44Q9H6X5 657 aa28.34■■■□□ 2.13
TMEM249-202ENST00000562477 SLAIN2Q9P270 581 aa28.34■■■□□ 2.13
TMEM249-202ENST00000562477 ROBO2Q9HCK4 1378 aa28.34■■■□□ 2.13
TMEM249-202ENST00000562477 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.32■■■□□ 2.12
TMEM249-202ENST00000562477 MYOM2P54296 1465 aa28.31■■■□□ 2.12
TMEM249-202ENST00000562477 ASXL1Q8IXJ9 1541 aa28.31■■■□□ 2.12
TMEM249-202ENST00000562477 NRXN1Q9ULB1 1477 aa28.3■■■□□ 2.12
TMEM249-202ENST00000562477 PTCH1Q13635 1447 aa28.3■■■□□ 2.12
TMEM249-202ENST00000562477 TMEM132EQ6IEE7 984 aa28.3■■■□□ 2.12
TMEM249-202ENST00000562477 ATF3P18847 181 aa28.29■■■□□ 2.12
TMEM249-202ENST00000562477 ROBO1Q9Y6N7 1651 aa28.29■■■□□ 2.12
TMEM249-202ENST00000562477 CADPS2Q86UW7 1296 aa28.28■■■□□ 2.12
TMEM249-202ENST00000562477 STK26Q9P289 416 aa28.28■■■□□ 2.12
TMEM249-202ENST00000562477 KDM2AQ9Y2K7 1162 aa28.27■■■□□ 2.12
TMEM249-202ENST00000562477 PRAG1Q86YV5 1406 aa28.26■■■□□ 2.12
TMEM249-202ENST00000562477 ADGRL3Q9HAR2 1447 aa28.26■■■□□ 2.12
TMEM249-202ENST00000562477 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
TMEM249-202ENST00000562477 CFAP70Q5T0N1 1121 aa28.26■■■□□ 2.11
TMEM249-202ENST00000562477 DHX57Q6P158 1386 aaKnown RBP28.25■■■□□ 2.11
TMEM249-202ENST00000562477 DCAF11Q8TEB1 546 aa28.25■■■□□ 2.11
TMEM249-202ENST00000562477 C14orf93Q9H972 538 aaKnown RBP28.25■■■□□ 2.11
TMEM249-202ENST00000562477 LRPPRCP42704 1394 aaKnown RBP28.24■■■□□ 2.11
TMEM249-202ENST00000562477 DCCP43146 1447 aa28.23■■■□□ 2.11
TMEM249-202ENST00000562477 NALCNQ8IZF0 1738 aa28.23■■■□□ 2.11
TMEM249-202ENST00000562477 TECPR2O15040 1411 aa28.19■■■□□ 2.1
TMEM249-202ENST00000562477 MST1RQ04912 1400 aa28.19■■■□□ 2.1
TMEM249-202ENST00000562477 YTHDC2Q9H6S0 1430 aaKnown RBP28.19■■■□□ 2.1
TMEM249-202ENST00000562477 WAPLQ7Z5K2 1190 aa28.19■■■□□ 2.1
TMEM249-202ENST00000562477 ABCC11Q96J66 1382 aa28.19■■■□□ 2.1
TMEM249-202ENST00000562477 DISP3Q9P2K9 1392 aa28.19■■■□□ 2.1
TMEM249-202ENST00000562477 PLEKHH1Q9ULM0 1364 aa28.17■■■□□ 2.1
TMEM249-202ENST00000562477 BRINP3Q76B58 766 aa28.16■■■□□ 2.1
TMEM249-202ENST00000562477 SIN3AQ96ST3 1273 aa28.13■■■□□ 2.09
TMEM249-202ENST00000562477 LAMC1P11047 1609 aa28.13■■■□□ 2.09
TMEM249-202ENST00000562477 KNDC1Q76NI1 1749 aa28.12■■■□□ 2.09
TMEM249-202ENST00000562477 MED1Q15648 1581 aaPredicted RBP28.11■■■□□ 2.09
TMEM249-202ENST00000562477 PHLPP1O60346 1717 aa28.1■■■□□ 2.09
TMEM249-202ENST00000562477 ADGRB1O14514 1584 aa28.1■■■□□ 2.09
TMEM249-202ENST00000562477 STAC3Q96MF2 364 aa28.09■■■□□ 2.09
TMEM249-202ENST00000562477 C1orf167Q5SNV9 1468 aa28.08■■■□□ 2.09
TMEM249-202ENST00000562477 DDX17Q92841 729 aaKnown RBP28.06■■■□□ 2.08
TMEM249-202ENST00000562477 COL16A1Q07092 1604 aaPredicted RBP28.06■■■□□ 2.08
TMEM249-202ENST00000562477 AHDC1Q5TGY3 1603 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms