RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 CHGAP10645 457 aaKnown RBP35.58■■■■□ 3.29
TMEM170A-202ENST00000561878 BCANQ96GW7 911 aa35.58■■■■□ 3.29
TMEM170A-202ENST00000561878 SLC26A8Q96RN1 970 aa35.58■■■■□ 3.29
TMEM170A-202ENST00000561878 PPP1R15AO75807 674 aaPredicted RBP35.57■■■■□ 3.28
TMEM170A-202ENST00000561878 HSPA1LP34931 641 aa35.56■■■■□ 3.28
TMEM170A-202ENST00000561878 PLEKHG1Q9ULL1 1385 aa35.55■■■■□ 3.28
TMEM170A-202ENST00000561878 KCNA6P17658 529 aa35.55■■■■□ 3.28
TMEM170A-202ENST00000561878 XIRP1Q702N8 1843 aaKnown RBP35.55■■■■□ 3.28
TMEM170A-202ENST00000561878 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.53■■■■□ 3.28
TMEM170A-202ENST00000561878 NWD1Q149M9 1564 aa35.51■■■■□ 3.27
TMEM170A-202ENST00000561878 SPHKAPQ2M3C7 1700 aa35.5■■■■□ 3.27
TMEM170A-202ENST00000561878 NAIPQ13075 1403 aa35.49■■■■□ 3.27
TMEM170A-202ENST00000561878 NKTRP30414 1462 aaKnown RBP35.48■■■■□ 3.27
TMEM170A-202ENST00000561878 TMEM94Q12767 1356 aa35.46■■■■□ 3.27
TMEM170A-202ENST00000561878 PROSER2Q86WR7 435 aaPredicted RBP35.44■■■■□ 3.26
TMEM170A-202ENST00000561878 SENP3Q9H4L4 574 aaPredicted RBP35.42■■■■□ 3.26
TMEM170A-202ENST00000561878 HFM1A2PYH4 1435 aa35.41■■■■□ 3.26
TMEM170A-202ENST00000561878 CHD2O14647 1828 aaKnown RBP35.41■■■■□ 3.26
TMEM170A-202ENST00000561878 DIP2AQ14689 1571 aa35.4■■■■□ 3.26
TMEM170A-202ENST00000561878 TBX22Q9Y458 520 aa35.39■■■■□ 3.26
TMEM170A-202ENST00000561878 NUTM2DQ5VT03 806 aaPredicted RBP35.36■■■■□ 3.25
TMEM170A-202ENST00000561878 ILDR2Q71H61 639 aa35.35■■■■□ 3.25
TMEM170A-202ENST00000561878 ADAMTS13Q76LX8 1427 aa35.32■■■■□ 3.25
TMEM170A-202ENST00000561878 TRPM2O94759 1503 aa35.32■■■■□ 3.25
TMEM170A-202ENST00000561878 MED1Q15648 1581 aaPredicted RBP35.32■■■■□ 3.24
TMEM170A-202ENST00000561878 TRIM52Q96A61 297 aa35.31■■■■□ 3.24
TMEM170A-202ENST00000561878 MSH6P52701 1360 aa35.3■■■■□ 3.24
TMEM170A-202ENST00000561878 PIK3R4Q99570 1358 aa35.3■■■■□ 3.24
TMEM170A-202ENST00000561878 RBM33Q96EV2 1170 aaKnown RBP35.3■■■■□ 3.24
TMEM170A-202ENST00000561878 CLTCL1P53675 1640 aa35.29■■■■□ 3.24
TMEM170A-202ENST00000561878 FAM135BQ49AJ0 1406 aa35.29■■■■□ 3.24
TMEM170A-202ENST00000561878 ZNF326Q5BKZ1 582 aaKnown RBP35.28■■■■□ 3.24
TMEM170A-202ENST00000561878 KIF1BO60333 1816 aa35.25■■■■□ 3.23
TMEM170A-202ENST00000561878 NCOA3Q9Y6Q9 1424 aa35.23■■■■□ 3.23
TMEM170A-202ENST00000561878 SETBP1Q9Y6X0 1596 aa35.21■■■■□ 3.23
TMEM170A-202ENST00000561878 SLC4A1APQ9BWU0 796 aaKnown RBP35.21■■■■□ 3.23
TMEM170A-202ENST00000561878 ROBO1Q9Y6N7 1651 aa35.21■■■■□ 3.23
TMEM170A-202ENST00000561878 NRXN3Q9Y4C0 1643 aa35.17■■■■□ 3.22
TMEM170A-202ENST00000561878 NEXMIFQ5QGS0 1516 aa35.16■■■■□ 3.22
TMEM170A-202ENST00000561878 C14orf37Q86TY3 774 aa35.16■■■■□ 3.22
TMEM170A-202ENST00000561878 SOCS7O14512 581 aa35.15■■■■□ 3.22
TMEM170A-202ENST00000561878 AMOTL2Q9Y2J4 779 aa35.14■■■■□ 3.22
TMEM170A-202ENST00000561878 SLAIN2Q9P270 581 aa35.12■■■■□ 3.21
TMEM170A-202ENST00000561878 PHF23Q9BUL5 403 aaPredicted RBP35.11■■■■□ 3.21
TMEM170A-202ENST00000561878 PTPRUQ92729 1446 aa35.11■■■■□ 3.21
TMEM170A-202ENST00000561878 XRN1Q8IZH2 1706 aaKnown RBP35.09■■■■□ 3.21
TMEM170A-202ENST00000561878 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.07■■■■□ 3.2
TMEM170A-202ENST00000561878 C19orf44Q9H6X5 657 aa35.07■■■■□ 3.2
TMEM170A-202ENST00000561878 CADPS2Q86UW7 1296 aa35.05■■■■□ 3.2
TMEM170A-202ENST00000561878 VGFO15240 615 aaPredicted RBP35.03■■■■□ 3.2
TMEM170A-202ENST00000561878 ATF3P18847 181 aa35.03■■■■□ 3.2
TMEM170A-202ENST00000561878 METP08581 1390 aa35.02■■■■□ 3.2
TMEM170A-202ENST00000561878 PHLPP1O60346 1717 aa35.02■■■■□ 3.2
TMEM170A-202ENST00000561878 RPGRIP1LQ68CZ1 1315 aa35.02■■■■□ 3.2
TMEM170A-202ENST00000561878 ACIN1Q9UKV3 1341 aaKnown RBP35.01■■■■□ 3.19
TMEM170A-202ENST00000561878 DCCP43146 1447 aa34.98■■■■□ 3.19
TMEM170A-202ENST00000561878 PPLO60437 1756 aa34.97■■■■□ 3.19
TMEM170A-202ENST00000561878 FOXD1Q16676 465 aa34.96■■■■□ 3.19
TMEM170A-202ENST00000561878 CCDC144AA2RUR9 1427 aa34.96■■■■□ 3.19
TMEM170A-202ENST00000561878 MPHOSPH9Q99550 1183 aa34.95■■■■□ 3.19
TMEM170A-202ENST00000561878 SETD1AO15047 1707 aaKnown RBP34.91■■■■□ 3.18
TMEM170A-202ENST00000561878 SETD5Q9C0A6 1442 aa34.9■■■■□ 3.18
TMEM170A-202ENST00000561878 COL16A1Q07092 1604 aaPredicted RBP34.88■■■■□ 3.17
TMEM170A-202ENST00000561878 JCADQ9P266 1359 aa34.88■■■■□ 3.17
TMEM170A-202ENST00000561878 AHDC1Q5TGY3 1603 aaPredicted RBP34.87■■■■□ 3.17
TMEM170A-202ENST00000561878 ADGRL3Q9HAR2 1447 aa34.86■■■■□ 3.17
TMEM170A-202ENST00000561878 PTCH1Q13635 1447 aa34.84■■■■□ 3.17
TMEM170A-202ENST00000561878 NALCNQ8IZF0 1738 aa34.83■■■■□ 3.17
TMEM170A-202ENST00000561878 MST1RQ04912 1400 aa34.81■■■■□ 3.16
TMEM170A-202ENST00000561878 SPATA31E1Q6ZUB1 1445 aa34.81■■■■□ 3.16
TMEM170A-202ENST00000561878 BRINP3Q76B58 766 aa34.8■■■■□ 3.16
TMEM170A-202ENST00000561878 PRAG1Q86YV5 1406 aa34.8■■■■□ 3.16
TMEM170A-202ENST00000561878 ANKRD30BQ9BXX2 1392 aa34.79■■■■□ 3.16
TMEM170A-202ENST00000561878 RGL3Q3MIN7 710 aa34.79■■■■□ 3.16
TMEM170A-202ENST00000561878 IFT172Q9UG01 1749 aa34.78■■■■□ 3.16
TMEM170A-202ENST00000561878 ASXL1Q8IXJ9 1541 aa34.77■■■■□ 3.16
TMEM170A-202ENST00000561878 RAB3GAP2Q9H2M9 1393 aa34.75■■■■□ 3.15
TMEM170A-202ENST00000561878 RGS17Q9UGC6 210 aaPredicted RBP34.75■■■■□ 3.15
TMEM170A-202ENST00000561878 ROBO2Q9HCK4 1378 aa34.74■■■■□ 3.15
TMEM170A-202ENST00000561878 SPATA31A6Q5VVP1 1343 aa34.73■■■■□ 3.15
TMEM170A-202ENST00000561878 ADGRF5Q8IZF2 1346 aa34.73■■■■□ 3.15
TMEM170A-202ENST00000561878 SHPRHQ149N8 1683 aa34.73■■■■□ 3.15
TMEM170A-202ENST00000561878 NHSL1Q5SYE7 1610 aa34.7■■■■□ 3.15
TMEM170A-202ENST00000561878 PIK3C2GO75747 1445 aa34.64■■■■□ 3.14
TMEM170A-202ENST00000561878 C1orf167Q5SNV9 1468 aa34.64■■■■□ 3.14
TMEM170A-202ENST00000561878 LRP6O75581 1613 aa34.6■■■■□ 3.13
TMEM170A-202ENST00000561878 MEX3CQ5U5Q3 659 aaKnown RBP34.6■■■■□ 3.13
TMEM170A-202ENST00000561878 TECPR2O15040 1411 aa34.59■■■■□ 3.13
TMEM170A-202ENST00000561878 LRPPRCP42704 1394 aaKnown RBP34.59■■■■□ 3.13
TMEM170A-202ENST00000561878 KNDC1Q76NI1 1749 aa34.58■■■■□ 3.13
TMEM170A-202ENST00000561878 POTEAQ6S8J7 498 aa34.58■■■■□ 3.13
TMEM170A-202ENST00000561878 LRRC59Q96AG4 307 aaKnown RBP34.58■■■■□ 3.13
TMEM170A-202ENST00000561878 STK26Q9P289 416 aa34.56■■■■□ 3.12
TMEM170A-202ENST00000561878 MYOM2P54296 1465 aa34.56■■■■□ 3.12
TMEM170A-202ENST00000561878 CDC42BPGQ6DT37 1551 aa34.56■■■■□ 3.12
TMEM170A-202ENST00000561878 LAMC1P11047 1609 aa34.55■■■■□ 3.12
TMEM170A-202ENST00000561878 ABCC11Q96J66 1382 aa34.54■■■■□ 3.12
TMEM170A-202ENST00000561878 HRCP23327 699 aa34.53■■■■□ 3.12
TMEM170A-202ENST00000561878 NRXN1Q9ULB1 1477 aa34.52■■■■□ 3.12
TMEM170A-202ENST00000561878 TMEM132EQ6IEE7 984 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms