RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 PLEKHG1Q9ULL1 1385 aa23.2■■□□□ 1.3
CCDC113-203ENST00000561517 LRRC7Q96NW7 1537 aa23.19■■□□□ 1.3
CCDC113-203ENST00000561517 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCDC113-203ENST00000561517 SLC4A1APQ9BWU0 796 aaKnown RBP23.19■■□□□ 1.3
CCDC113-203ENST00000561517 KIF1BO60333 1816 aa23.18■■□□□ 1.3
CCDC113-203ENST00000561517 UBAP1LF5GYI3 381 aa23.17■■□□□ 1.3
CCDC113-203ENST00000561517 SLC26A8Q96RN1 970 aa23.17■■□□□ 1.3
CCDC113-203ENST00000561517 PPP1R15AO75807 674 aaPredicted RBP23.16■■□□□ 1.3
CCDC113-203ENST00000561517 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
CCDC113-203ENST00000561517 XIRP1Q702N8 1843 aaKnown RBP23.15■■□□□ 1.3
CCDC113-203ENST00000561517 ACIN1Q9UKV3 1341 aaKnown RBP23.14■■□□□ 1.3
CCDC113-203ENST00000561517 CHD2O14647 1828 aaKnown RBP23.13■■□□□ 1.29
CCDC113-203ENST00000561517 KCNA6P17658 529 aa23.13■■□□□ 1.29
CCDC113-203ENST00000561517 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
CCDC113-203ENST00000561517 BCANQ96GW7 911 aa23.12■■□□□ 1.29
CCDC113-203ENST00000561517 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
CCDC113-203ENST00000561517 ADAMTS13Q76LX8 1427 aa23.1■■□□□ 1.29
CCDC113-203ENST00000561517 TOM1O60784 492 aa23.1■■□□□ 1.29
CCDC113-203ENST00000561517 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
CCDC113-203ENST00000561517 ALKQ9UM73 1620 aa23.1■■□□□ 1.29
CCDC113-203ENST00000561517 DIP2AQ14689 1571 aa23.1■■□□□ 1.29
CCDC113-203ENST00000561517 MPHOSPH9Q99550 1183 aa23.09■■□□□ 1.29
CCDC113-203ENST00000561517 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.28
CCDC113-203ENST00000561517 NKTRP30414 1462 aaKnown RBP23.07■■□□□ 1.28
CCDC113-203ENST00000561517 ZNF326Q5BKZ1 582 aaKnown RBP23.07■■□□□ 1.28
CCDC113-203ENST00000561517 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
CCDC113-203ENST00000561517 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
CCDC113-203ENST00000561517 FOXD1Q16676 465 aa23.06■■□□□ 1.28
CCDC113-203ENST00000561517 NRXN3Q9Y4C0 1643 aa23.06■■□□□ 1.28
CCDC113-203ENST00000561517 SETBP1Q9Y6X0 1596 aa23.05■■□□□ 1.28
CCDC113-203ENST00000561517 PIK3R4Q99570 1358 aa23.03■■□□□ 1.28
CCDC113-203ENST00000561517 TMEM94Q12767 1356 aa23.02■■□□□ 1.28
CCDC113-203ENST00000561517 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
CCDC113-203ENST00000561517 PPLO60437 1756 aa23■■□□□ 1.27
CCDC113-203ENST00000561517 PIP4K2BP78356 416 aa23■■□□□ 1.27
CCDC113-203ENST00000561517 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
CCDC113-203ENST00000561517 RPGRIP1LQ68CZ1 1315 aa22.99■■□□□ 1.27
CCDC113-203ENST00000561517 HRCP23327 699 aa22.97■■□□□ 1.27
CCDC113-203ENST00000561517 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
CCDC113-203ENST00000561517 PTPRUQ92729 1446 aa22.96■■□□□ 1.27
CCDC113-203ENST00000561517 VGFO15240 615 aaPredicted RBP22.95■■□□□ 1.26
CCDC113-203ENST00000561517 SPATA31E1Q6ZUB1 1445 aa22.95■■□□□ 1.26
CCDC113-203ENST00000561517 NCOA3Q9Y6Q9 1424 aa22.94■■□□□ 1.26
CCDC113-203ENST00000561517 RBM33Q96EV2 1170 aaKnown RBP22.94■■□□□ 1.26
CCDC113-203ENST00000561517 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
CCDC113-203ENST00000561517 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
CCDC113-203ENST00000561517 AMOTL2Q9Y2J4 779 aa22.92■■□□□ 1.26
CCDC113-203ENST00000561517 IFT172Q9UG01 1749 aa22.91■■□□□ 1.26
CCDC113-203ENST00000561517 METP08581 1390 aa22.91■■□□□ 1.26
CCDC113-203ENST00000561517 HSPA1LP34931 641 aa22.91■■□□□ 1.26
CCDC113-203ENST00000561517 MSH6P52701 1360 aa22.89■■□□□ 1.26
CCDC113-203ENST00000561517 FAM135BQ49AJ0 1406 aa22.87■■□□□ 1.25
CCDC113-203ENST00000561517 RGL3Q3MIN7 710 aa22.86■■□□□ 1.25
CCDC113-203ENST00000561517 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
CCDC113-203ENST00000561517 ANKRD30BQ9BXX2 1392 aa22.85■■□□□ 1.25
CCDC113-203ENST00000561517 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
CCDC113-203ENST00000561517 ROBO1Q9Y6N7 1651 aa22.82■■□□□ 1.24
CCDC113-203ENST00000561517 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
CCDC113-203ENST00000561517 C14orf37Q86TY3 774 aa22.8■■□□□ 1.24
CCDC113-203ENST00000561517 SLAIN2Q9P270 581 aa22.8■■□□□ 1.24
CCDC113-203ENST00000561517 PRAG1Q86YV5 1406 aa22.8■■□□□ 1.24
CCDC113-203ENST00000561517 DCCP43146 1447 aa22.77■■□□□ 1.24
CCDC113-203ENST00000561517 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
CCDC113-203ENST00000561517 CADPS2Q86UW7 1296 aa22.77■■□□□ 1.24
CCDC113-203ENST00000561517 PIK3C2GO75747 1445 aa22.76■■□□□ 1.23
CCDC113-203ENST00000561517 MYOM2P54296 1465 aa22.74■■□□□ 1.23
CCDC113-203ENST00000561517 NRXN1Q9ULB1 1477 aa22.74■■□□□ 1.23
CCDC113-203ENST00000561517 ATF3P18847 181 aa22.74■■□□□ 1.23
CCDC113-203ENST00000561517 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
CCDC113-203ENST00000561517 NALCNQ8IZF0 1738 aa22.74■■□□□ 1.23
CCDC113-203ENST00000561517 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
CCDC113-203ENST00000561517 ROBO2Q9HCK4 1378 aa22.73■■□□□ 1.23
CCDC113-203ENST00000561517 ASXL1Q8IXJ9 1541 aa22.71■■□□□ 1.23
CCDC113-203ENST00000561517 MED1Q15648 1581 aaPredicted RBP22.69■■□□□ 1.22
CCDC113-203ENST00000561517 PHLPP1O60346 1717 aa22.68■■□□□ 1.22
CCDC113-203ENST00000561517 KNDC1Q76NI1 1749 aa22.68■■□□□ 1.22
CCDC113-203ENST00000561517 LAMC1P11047 1609 aa22.68■■□□□ 1.22
CCDC113-203ENST00000561517 TECPR2O15040 1411 aa22.68■■□□□ 1.22
CCDC113-203ENST00000561517 C14orf93Q9H972 538 aaKnown RBP22.68■■□□□ 1.22
CCDC113-203ENST00000561517 MST1RQ04912 1400 aa22.67■■□□□ 1.22
CCDC113-203ENST00000561517 LRPPRCP42704 1394 aaKnown RBP22.67■■□□□ 1.22
CCDC113-203ENST00000561517 ABCC11Q96J66 1382 aa22.66■■□□□ 1.22
CCDC113-203ENST00000561517 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
CCDC113-203ENST00000561517 AHDC1Q5TGY3 1603 aaPredicted RBP22.64■■□□□ 1.21
CCDC113-203ENST00000561517 CFAP70Q5T0N1 1121 aa22.63■■□□□ 1.21
CCDC113-203ENST00000561517 BRINP3Q76B58 766 aa22.63■■□□□ 1.21
CCDC113-203ENST00000561517 STAC3Q96MF2 364 aa22.63■■□□□ 1.21
CCDC113-203ENST00000561517 COL16A1Q07092 1604 aaPredicted RBP22.63■■□□□ 1.21
CCDC113-203ENST00000561517 YTHDC2Q9H6S0 1430 aaKnown RBP22.63■■□□□ 1.21
CCDC113-203ENST00000561517 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
CCDC113-203ENST00000561517 STK26Q9P289 416 aa22.61■■□□□ 1.21
CCDC113-203ENST00000561517 DCAF11Q8TEB1 546 aa22.6■■□□□ 1.21
CCDC113-203ENST00000561517 SIRT1Q96EB6 747 aa22.59■■□□□ 1.21
CCDC113-203ENST00000561517 NHSL1Q5SYE7 1610 aa22.58■■□□□ 1.21
CCDC113-203ENST00000561517 KDM2AQ9Y2K7 1162 aa22.58■■□□□ 1.21
CCDC113-203ENST00000561517 C1orf167Q5SNV9 1468 aa22.58■■□□□ 1.2
CCDC113-203ENST00000561517 CDC42BPGQ6DT37 1551 aa22.58■■□□□ 1.2
CCDC113-203ENST00000561517 WAPLQ7Z5K2 1190 aa22.57■■□□□ 1.2
CCDC113-203ENST00000561517 ADGRB1O14514 1584 aa22.56■■□□□ 1.2
CCDC113-203ENST00000561517 JCADQ9P266 1359 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms