RNA–Protein interactions for RNA: ENST00000561290.1

CRTC3-214, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-214ENST00000561290 RIMS2Q9UQ26 1411 aa21.98■■□□□ 1.11
CRTC3-214ENST00000561290 HDGFP51858 240 aaKnown RBP21.97■■□□□ 1.11
CRTC3-214ENST00000561290 PIP4K2BP78356 416 aa21.97■■□□□ 1.11
CRTC3-214ENST00000561290 SPHKAPQ2M3C7 1700 aa21.97■■□□□ 1.11
CRTC3-214ENST00000561290 KCNA6P17658 529 aa21.96■■□□□ 1.11
CRTC3-214ENST00000561290 SCAF1Q9H7N4 1312 aaKnown RBP21.96■■□□□ 1.11
CRTC3-214ENST00000561290 NAIPQ13075 1403 aa21.96■■□□□ 1.11
CRTC3-214ENST00000561290 HSPA1LP34931 641 aa21.94■■□□□ 1.1
CRTC3-214ENST00000561290 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
CRTC3-214ENST00000561290 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.93■■□□□ 1.1
CRTC3-214ENST00000561290 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
CRTC3-214ENST00000561290 HFM1A2PYH4 1435 aa21.92■■□□□ 1.1
CRTC3-214ENST00000561290 CHD2O14647 1828 aaKnown RBP21.92■■□□□ 1.1
CRTC3-214ENST00000561290 TMEM94Q12767 1356 aa21.91■■□□□ 1.1
CRTC3-214ENST00000561290 PPP1R15AO75807 674 aaPredicted RBP21.9■■□□□ 1.1
CRTC3-214ENST00000561290 TRPM2O94759 1503 aa21.88■■□□□ 1.09
CRTC3-214ENST00000561290 TBX22Q9Y458 520 aa21.87■■□□□ 1.09
CRTC3-214ENST00000561290 ADAMTS13Q76LX8 1427 aa21.87■■□□□ 1.09
CRTC3-214ENST00000561290 MED1Q15648 1581 aaPredicted RBP21.87■■□□□ 1.09
CRTC3-214ENST00000561290 CHGAP10645 457 aaKnown RBP21.86■■□□□ 1.09
CRTC3-214ENST00000561290 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
CRTC3-214ENST00000561290 BCANQ96GW7 911 aa21.85■■□□□ 1.09
CRTC3-214ENST00000561290 FAM135BQ49AJ0 1406 aa21.84■■□□□ 1.09
CRTC3-214ENST00000561290 NCOA3Q9Y6Q9 1424 aa21.83■■□□□ 1.09
CRTC3-214ENST00000561290 ILDR2Q71H61 639 aa21.83■■□□□ 1.09
CRTC3-214ENST00000561290 PROSER2Q86WR7 435 aaPredicted RBP21.83■■□□□ 1.09
CRTC3-214ENST00000561290 CLTCL1P53675 1640 aa21.83■■□□□ 1.08
CRTC3-214ENST00000561290 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
CRTC3-214ENST00000561290 MSH6P52701 1360 aa21.8■■□□□ 1.08
CRTC3-214ENST00000561290 NRXN3Q9Y4C0 1643 aa21.8■■□□□ 1.08
CRTC3-214ENST00000561290 KIF1BO60333 1816 aa21.78■■□□□ 1.08
CRTC3-214ENST00000561290 ROBO1Q9Y6N7 1651 aa21.78■■□□□ 1.08
CRTC3-214ENST00000561290 NEXMIFQ5QGS0 1516 aa21.77■■□□□ 1.08
CRTC3-214ENST00000561290 NUTM2DQ5VT03 806 aaPredicted RBP21.75■■□□□ 1.07
CRTC3-214ENST00000561290 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
CRTC3-214ENST00000561290 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
CRTC3-214ENST00000561290 SOCS7O14512 581 aa21.72■■□□□ 1.07
CRTC3-214ENST00000561290 RBM33Q96EV2 1170 aaKnown RBP21.72■■□□□ 1.07
CRTC3-214ENST00000561290 PTPRUQ92729 1446 aa21.72■■□□□ 1.07
CRTC3-214ENST00000561290 TRIM52Q96A61 297 aa21.71■■□□□ 1.07
CRTC3-214ENST00000561290 ZNF326Q5BKZ1 582 aaKnown RBP21.7■■□□□ 1.06
CRTC3-214ENST00000561290 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
CRTC3-214ENST00000561290 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
CRTC3-214ENST00000561290 DCCP43146 1447 aa21.68■■□□□ 1.06
CRTC3-214ENST00000561290 SLAIN2Q9P270 581 aa21.67■■□□□ 1.06
CRTC3-214ENST00000561290 AMOTL2Q9Y2J4 779 aa21.67■■□□□ 1.06
CRTC3-214ENST00000561290 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
CRTC3-214ENST00000561290 C19orf44Q9H6X5 657 aa21.65■■□□□ 1.06
CRTC3-214ENST00000561290 METP08581 1390 aa21.64■■□□□ 1.06
CRTC3-214ENST00000561290 SETD1AO15047 1707 aaKnown RBP21.64■■□□□ 1.06
CRTC3-214ENST00000561290 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.05
CRTC3-214ENST00000561290 CADPS2Q86UW7 1296 aa21.64■■□□□ 1.05
CRTC3-214ENST00000561290 PPLO60437 1756 aa21.64■■□□□ 1.05
CRTC3-214ENST00000561290 PHLPP1O60346 1717 aa21.63■■□□□ 1.05
CRTC3-214ENST00000561290 PRAG1Q86YV5 1406 aa21.63■■□□□ 1.05
CRTC3-214ENST00000561290 VGFO15240 615 aaPredicted RBP21.61■■□□□ 1.05
CRTC3-214ENST00000561290 C14orf37Q86TY3 774 aa21.61■■□□□ 1.05
CRTC3-214ENST00000561290 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
CRTC3-214ENST00000561290 COL16A1Q07092 1604 aaPredicted RBP21.61■■□□□ 1.05
CRTC3-214ENST00000561290 AHDC1Q5TGY3 1603 aaPredicted RBP21.61■■□□□ 1.05
CRTC3-214ENST00000561290 CCDC144AA2RUR9 1427 aa21.59■■□□□ 1.05
CRTC3-214ENST00000561290 ATF3P18847 181 aa21.59■■□□□ 1.05
CRTC3-214ENST00000561290 PTCH1Q13635 1447 aa21.59■■□□□ 1.05
CRTC3-214ENST00000561290 ADGRL3Q9HAR2 1447 aa21.57■■□□□ 1.04
CRTC3-214ENST00000561290 JCADQ9P266 1359 aa21.56■■□□□ 1.04
CRTC3-214ENST00000561290 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
CRTC3-214ENST00000561290 NALCNQ8IZF0 1738 aa21.55■■□□□ 1.04
CRTC3-214ENST00000561290 IFT172Q9UG01 1749 aa21.55■■□□□ 1.04
CRTC3-214ENST00000561290 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
CRTC3-214ENST00000561290 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
CRTC3-214ENST00000561290 MST1RQ04912 1400 aa21.54■■□□□ 1.04
CRTC3-214ENST00000561290 ASXL1Q8IXJ9 1541 aa21.52■■□□□ 1.04
CRTC3-214ENST00000561290 FOXD1Q16676 465 aa21.52■■□□□ 1.04
CRTC3-214ENST00000561290 SHPRHQ149N8 1683 aa21.51■■□□□ 1.03
CRTC3-214ENST00000561290 ANKRD30BQ9BXX2 1392 aa21.5■■□□□ 1.03
CRTC3-214ENST00000561290 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
CRTC3-214ENST00000561290 NHSL1Q5SYE7 1610 aa21.5■■□□□ 1.03
CRTC3-214ENST00000561290 RGS17Q9UGC6 210 aaPredicted RBP21.48■■□□□ 1.03
CRTC3-214ENST00000561290 ROBO2Q9HCK4 1378 aa21.48■■□□□ 1.03
CRTC3-214ENST00000561290 SPATA31A6Q5VVP1 1343 aa21.47■■□□□ 1.03
CRTC3-214ENST00000561290 RAB3GAP2Q9H2M9 1393 aa21.46■■□□□ 1.03
CRTC3-214ENST00000561290 TECPR2O15040 1411 aa21.45■■□□□ 1.02
CRTC3-214ENST00000561290 PIK3C2GO75747 1445 aa21.44■■□□□ 1.02
CRTC3-214ENST00000561290 LAMC1P11047 1609 aa21.44■■□□□ 1.02
CRTC3-214ENST00000561290 ADGRF5Q8IZF2 1346 aa21.43■■□□□ 1.02
CRTC3-214ENST00000561290 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
CRTC3-214ENST00000561290 C1orf167Q5SNV9 1468 aa21.42■■□□□ 1.02
CRTC3-214ENST00000561290 LRP6O75581 1613 aa21.41■■□□□ 1.02
CRTC3-214ENST00000561290 CDC42BPGQ6DT37 1551 aa21.41■■□□□ 1.02
CRTC3-214ENST00000561290 MYOM2P54296 1465 aa21.4■■□□□ 1.02
CRTC3-214ENST00000561290 NRXN1Q9ULB1 1477 aa21.4■■□□□ 1.02
CRTC3-214ENST00000561290 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
CRTC3-214ENST00000561290 LRPPRCP42704 1394 aaKnown RBP21.38■■□□□ 1.01
CRTC3-214ENST00000561290 ABCC11Q96J66 1382 aa21.36■■□□□ 1.01
CRTC3-214ENST00000561290 HRCP23327 699 aa21.35■■□□□ 1.01
CRTC3-214ENST00000561290 POTEAQ6S8J7 498 aa21.35■■□□□ 1.01
CRTC3-214ENST00000561290 LRRC59Q96AG4 307 aaKnown RBP21.34■■□□□ 1.01
CRTC3-214ENST00000561290 YTHDC2Q9H6S0 1430 aaKnown RBP21.32■■□□□ 1
CRTC3-214ENST00000561290 PNPLA6Q8IY17 1366 aa21.31■■□□□ 1
CRTC3-214ENST00000561290 C14orf93Q9H972 538 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms