RNA–Protein interactions for RNA: ENST00000561196.5

KNSTRN-214, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-214ENST00000561196 SLC26A8Q96RN1 970 aa28■■■□□ 2.07
KNSTRN-214ENST00000561196 SPHKAPQ2M3C7 1700 aa27.99■■■□□ 2.07
KNSTRN-214ENST00000561196 CHGAP10645 457 aaKnown RBP27.99■■■□□ 2.07
KNSTRN-214ENST00000561196 NAIPQ13075 1403 aa27.99■■■□□ 2.07
KNSTRN-214ENST00000561196 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
KNSTRN-214ENST00000561196 BCANQ96GW7 911 aa27.97■■■□□ 2.07
KNSTRN-214ENST00000561196 NWD1Q149M9 1564 aa27.97■■■□□ 2.07
KNSTRN-214ENST00000561196 PLEKHG1Q9ULL1 1385 aa27.97■■■□□ 2.07
KNSTRN-214ENST00000561196 HSPA1LP34931 641 aa27.96■■■□□ 2.07
KNSTRN-214ENST00000561196 SENP3Q9H4L4 574 aaPredicted RBP27.94■■■□□ 2.06
KNSTRN-214ENST00000561196 KCNA6P17658 529 aa27.93■■■□□ 2.06
KNSTRN-214ENST00000561196 HDGFP51858 240 aaKnown RBP27.93■■■□□ 2.06
KNSTRN-214ENST00000561196 NKTRP30414 1462 aaKnown RBP27.92■■■□□ 2.06
KNSTRN-214ENST00000561196 HFM1A2PYH4 1435 aa27.91■■■□□ 2.06
KNSTRN-214ENST00000561196 TMEM94Q12767 1356 aa27.9■■■□□ 2.06
KNSTRN-214ENST00000561196 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.9■■■□□ 2.06
KNSTRN-214ENST00000561196 CHD2O14647 1828 aaKnown RBP27.88■■■□□ 2.05
KNSTRN-214ENST00000561196 DIP2AQ14689 1571 aa27.86■■■□□ 2.05
KNSTRN-214ENST00000561196 NUTM2DQ5VT03 806 aaPredicted RBP27.86■■■□□ 2.05
KNSTRN-214ENST00000561196 PROSER2Q86WR7 435 aaPredicted RBP27.85■■■□□ 2.05
KNSTRN-214ENST00000561196 CLTCL1P53675 1640 aa27.85■■■□□ 2.05
KNSTRN-214ENST00000561196 TRPM2O94759 1503 aa27.84■■■□□ 2.05
KNSTRN-214ENST00000561196 ADAMTS13Q76LX8 1427 aa27.84■■■□□ 2.05
KNSTRN-214ENST00000561196 RBM33Q96EV2 1170 aaKnown RBP27.82■■■□□ 2.04
KNSTRN-214ENST00000561196 MED1Q15648 1581 aaPredicted RBP27.82■■■□□ 2.04
KNSTRN-214ENST00000561196 ILDR2Q71H61 639 aa27.81■■■□□ 2.04
KNSTRN-214ENST00000561196 TBX22Q9Y458 520 aa27.8■■■□□ 2.04
KNSTRN-214ENST00000561196 TRIM52Q96A61 297 aa27.79■■■□□ 2.04
KNSTRN-214ENST00000561196 KIF1BO60333 1816 aa27.76■■■□□ 2.04
KNSTRN-214ENST00000561196 NRXN3Q9Y4C0 1643 aa27.76■■■□□ 2.03
KNSTRN-214ENST00000561196 MSH6P52701 1360 aa27.75■■■□□ 2.03
KNSTRN-214ENST00000561196 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
KNSTRN-214ENST00000561196 PIK3R4Q99570 1358 aa27.74■■■□□ 2.03
KNSTRN-214ENST00000561196 SETBP1Q9Y6X0 1596 aa27.74■■■□□ 2.03
KNSTRN-214ENST00000561196 ROBO1Q9Y6N7 1651 aa27.74■■■□□ 2.03
KNSTRN-214ENST00000561196 NEXMIFQ5QGS0 1516 aa27.73■■■□□ 2.03
KNSTRN-214ENST00000561196 FAM135BQ49AJ0 1406 aa27.73■■■□□ 2.03
KNSTRN-214ENST00000561196 SLC4A1APQ9BWU0 796 aaKnown RBP27.7■■■□□ 2.02
KNSTRN-214ENST00000561196 PTPRUQ92729 1446 aa27.67■■■□□ 2.02
KNSTRN-214ENST00000561196 NCOA3Q9Y6Q9 1424 aa27.67■■■□□ 2.02
KNSTRN-214ENST00000561196 XRN1Q8IZH2 1706 aaKnown RBP27.66■■■□□ 2.02
KNSTRN-214ENST00000561196 C14orf37Q86TY3 774 aa27.63■■■□□ 2.01
KNSTRN-214ENST00000561196 AMOTL2Q9Y2J4 779 aa27.63■■■□□ 2.01
KNSTRN-214ENST00000561196 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.62■■■□□ 2.01
KNSTRN-214ENST00000561196 SLAIN2Q9P270 581 aa27.6■■■□□ 2.01
KNSTRN-214ENST00000561196 METP08581 1390 aa27.59■■■□□ 2.01
KNSTRN-214ENST00000561196 SOCS7O14512 581 aa27.58■■■□□ 2.01
KNSTRN-214ENST00000561196 FOXD1Q16676 465 aa27.57■■■□□ 2
KNSTRN-214ENST00000561196 PHF23Q9BUL5 403 aaPredicted RBP27.57■■■□□ 2
KNSTRN-214ENST00000561196 PHLPP1O60346 1717 aa27.57■■■□□ 2
KNSTRN-214ENST00000561196 PPLO60437 1756 aa27.57■■■□□ 2
KNSTRN-214ENST00000561196 SETD1AO15047 1707 aaKnown RBP27.55■■■□□ 2
KNSTRN-214ENST00000561196 C19orf44Q9H6X5 657 aa27.54■■■□□ 2
KNSTRN-214ENST00000561196 CADPS2Q86UW7 1296 aa27.53■■■□□ 2
KNSTRN-214ENST00000561196 CCDC144AA2RUR9 1427 aa27.52■■■□□ 2
KNSTRN-214ENST00000561196 ATF3P18847 181 aa27.52■■■□□ 2
KNSTRN-214ENST00000561196 RPGRIP1LQ68CZ1 1315 aa27.51■■□□□ 1.99
KNSTRN-214ENST00000561196 VGFO15240 615 aaPredicted RBP27.51■■□□□ 1.99
KNSTRN-214ENST00000561196 DCCP43146 1447 aa27.5■■□□□ 1.99
KNSTRN-214ENST00000561196 MPHOSPH9Q99550 1183 aa27.5■■□□□ 1.99
KNSTRN-214ENST00000561196 SETD5Q9C0A6 1442 aa27.5■■□□□ 1.99
KNSTRN-214ENST00000561196 COL16A1Q07092 1604 aaPredicted RBP27.49■■□□□ 1.99
KNSTRN-214ENST00000561196 NALCNQ8IZF0 1738 aa27.47■■□□□ 1.99
KNSTRN-214ENST00000561196 AHDC1Q5TGY3 1603 aaPredicted RBP27.45■■□□□ 1.99
KNSTRN-214ENST00000561196 IFT172Q9UG01 1749 aa27.44■■□□□ 1.98
KNSTRN-214ENST00000561196 ADGRL3Q9HAR2 1447 aa27.44■■□□□ 1.98
KNSTRN-214ENST00000561196 ACIN1Q9UKV3 1341 aaKnown RBP27.43■■□□□ 1.98
KNSTRN-214ENST00000561196 PTCH1Q13635 1447 aa27.43■■□□□ 1.98
KNSTRN-214ENST00000561196 SPATA31E1Q6ZUB1 1445 aa27.42■■□□□ 1.98
KNSTRN-214ENST00000561196 JCADQ9P266 1359 aa27.41■■□□□ 1.98
KNSTRN-214ENST00000561196 MST1RQ04912 1400 aa27.41■■□□□ 1.98
KNSTRN-214ENST00000561196 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
KNSTRN-214ENST00000561196 ASXL1Q8IXJ9 1541 aa27.39■■□□□ 1.98
KNSTRN-214ENST00000561196 PRAG1Q86YV5 1406 aa27.39■■□□□ 1.97
KNSTRN-214ENST00000561196 RGL3Q3MIN7 710 aa27.38■■□□□ 1.97
KNSTRN-214ENST00000561196 BRINP3Q76B58 766 aa27.38■■□□□ 1.97
KNSTRN-214ENST00000561196 ROBO2Q9HCK4 1378 aa27.36■■□□□ 1.97
KNSTRN-214ENST00000561196 ADGRF5Q8IZF2 1346 aa27.36■■□□□ 1.97
KNSTRN-214ENST00000561196 ANKRD30BQ9BXX2 1392 aa27.35■■□□□ 1.97
KNSTRN-214ENST00000561196 NHSL1Q5SYE7 1610 aa27.34■■□□□ 1.97
KNSTRN-214ENST00000561196 SHPRHQ149N8 1683 aa27.34■■□□□ 1.97
KNSTRN-214ENST00000561196 RGS17Q9UGC6 210 aaPredicted RBP27.34■■□□□ 1.97
KNSTRN-214ENST00000561196 PIK3C2GO75747 1445 aa27.29■■□□□ 1.96
KNSTRN-214ENST00000561196 LRP6O75581 1613 aa27.27■■□□□ 1.96
KNSTRN-214ENST00000561196 C1orf167Q5SNV9 1468 aa27.27■■□□□ 1.96
KNSTRN-214ENST00000561196 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
KNSTRN-214ENST00000561196 KNDC1Q76NI1 1749 aa27.26■■□□□ 1.95
KNSTRN-214ENST00000561196 TECPR2O15040 1411 aa27.24■■□□□ 1.95
KNSTRN-214ENST00000561196 CDC42BPGQ6DT37 1551 aa27.23■■□□□ 1.95
KNSTRN-214ENST00000561196 MYOM2P54296 1465 aa27.23■■□□□ 1.95
KNSTRN-214ENST00000561196 LRPPRCP42704 1394 aaKnown RBP27.22■■□□□ 1.95
KNSTRN-214ENST00000561196 LAMC1P11047 1609 aa27.21■■□□□ 1.95
KNSTRN-214ENST00000561196 POTEAQ6S8J7 498 aa27.21■■□□□ 1.95
KNSTRN-214ENST00000561196 NRXN1Q9ULB1 1477 aa27.2■■□□□ 1.95
KNSTRN-214ENST00000561196 DDX17Q92841 729 aaKnown RBP27.2■■□□□ 1.94
KNSTRN-214ENST00000561196 STK26Q9P289 416 aa27.2■■□□□ 1.94
KNSTRN-214ENST00000561196 MEX3CQ5U5Q3 659 aaKnown RBP27.18■■□□□ 1.94
KNSTRN-214ENST00000561196 TMEM132EQ6IEE7 984 aa27.18■■□□□ 1.94
KNSTRN-214ENST00000561196 ABCC11Q96J66 1382 aa27.17■■□□□ 1.94
KNSTRN-214ENST00000561196 YTHDC2Q9H6S0 1430 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms