RNA–Protein interactions for RNA: ENST00000561088.1

SPG21-214, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-214ENST00000561088 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
SPG21-214ENST00000561088 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
SPG21-214ENST00000561088 SLC26A8Q96RN1 970 aa18.37■□□□□ 0.53
SPG21-214ENST00000561088 ZFYVE9O95405 1425 aa18.36■□□□□ 0.53
SPG21-214ENST00000561088 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.36■□□□□ 0.53
SPG21-214ENST00000561088 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
SPG21-214ENST00000561088 ZNF326Q5BKZ1 582 aaKnown RBP18.34■□□□□ 0.53
SPG21-214ENST00000561088 NUTM2DQ5VT03 806 aaPredicted RBP18.34■□□□□ 0.53
SPG21-214ENST00000561088 TRPM2O94759 1503 aa18.33■□□□□ 0.53
SPG21-214ENST00000561088 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.53
SPG21-214ENST00000561088 PLEKHG1Q9ULL1 1385 aa18.33■□□□□ 0.53
SPG21-214ENST00000561088 TOM1O60784 492 aa18.33■□□□□ 0.52
SPG21-214ENST00000561088 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
SPG21-214ENST00000561088 PIP4K2BP78356 416 aa18.32■□□□□ 0.52
SPG21-214ENST00000561088 KIF1BO60333 1816 aa18.32■□□□□ 0.52
SPG21-214ENST00000561088 SETD5Q9C0A6 1442 aa18.27■□□□□ 0.52
SPG21-214ENST00000561088 KCNA6P17658 529 aa18.27■□□□□ 0.52
SPG21-214ENST00000561088 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
SPG21-214ENST00000561088 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
SPG21-214ENST00000561088 FOXD1Q16676 465 aa18.25■□□□□ 0.51
SPG21-214ENST00000561088 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
SPG21-214ENST00000561088 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
SPG21-214ENST00000561088 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
SPG21-214ENST00000561088 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
SPG21-214ENST00000561088 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
SPG21-214ENST00000561088 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
SPG21-214ENST00000561088 CHD2O14647 1828 aaKnown RBP18.23■□□□□ 0.51
SPG21-214ENST00000561088 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
SPG21-214ENST00000561088 RBM33Q96EV2 1170 aaKnown RBP18.21■□□□□ 0.51
SPG21-214ENST00000561088 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
SPG21-214ENST00000561088 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
SPG21-214ENST00000561088 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
SPG21-214ENST00000561088 RAB3GAP2Q9H2M9 1393 aa18.2■□□□□ 0.5
SPG21-214ENST00000561088 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
SPG21-214ENST00000561088 SETBP1Q9Y6X0 1596 aa18.18■□□□□ 0.5
SPG21-214ENST00000561088 ALKQ9UM73 1620 aa18.18■□□□□ 0.5
SPG21-214ENST00000561088 MSH6P52701 1360 aa18.17■□□□□ 0.5
SPG21-214ENST00000561088 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
SPG21-214ENST00000561088 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
SPG21-214ENST00000561088 HSPA1LP34931 641 aa18.16■□□□□ 0.5
SPG21-214ENST00000561088 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
SPG21-214ENST00000561088 PPLO60437 1756 aa18.14■□□□□ 0.5
SPG21-214ENST00000561088 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
SPG21-214ENST00000561088 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
SPG21-214ENST00000561088 DISP3Q9P2K9 1392 aa18.13■□□□□ 0.49
SPG21-214ENST00000561088 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
SPG21-214ENST00000561088 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
SPG21-214ENST00000561088 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
SPG21-214ENST00000561088 METP08581 1390 aa18.1■□□□□ 0.49
SPG21-214ENST00000561088 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.49
SPG21-214ENST00000561088 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.48
SPG21-214ENST00000561088 ATF3P18847 181 aa18.07■□□□□ 0.48
SPG21-214ENST00000561088 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
SPG21-214ENST00000561088 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
SPG21-214ENST00000561088 ANKRD30BQ9BXX2 1392 aa18.05■□□□□ 0.48
SPG21-214ENST00000561088 SLAIN2Q9P270 581 aa18.05■□□□□ 0.48
SPG21-214ENST00000561088 IFT172Q9UG01 1749 aa18.05■□□□□ 0.48
SPG21-214ENST00000561088 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
SPG21-214ENST00000561088 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
SPG21-214ENST00000561088 C19orf44Q9H6X5 657 aa18.04■□□□□ 0.48
SPG21-214ENST00000561088 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
SPG21-214ENST00000561088 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.48
SPG21-214ENST00000561088 HRCP23327 699 aa18.02■□□□□ 0.48
SPG21-214ENST00000561088 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
SPG21-214ENST00000561088 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
SPG21-214ENST00000561088 PHLPP1O60346 1717 aa18■□□□□ 0.47
SPG21-214ENST00000561088 DCCP43146 1447 aa17.98■□□□□ 0.47
SPG21-214ENST00000561088 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
SPG21-214ENST00000561088 NALCNQ8IZF0 1738 aa17.98■□□□□ 0.47
SPG21-214ENST00000561088 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
SPG21-214ENST00000561088 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
SPG21-214ENST00000561088 STK26Q9P289 416 aa17.96■□□□□ 0.47
SPG21-214ENST00000561088 ROBO2Q9HCK4 1378 aa17.95■□□□□ 0.46
SPG21-214ENST00000561088 MYOM2P54296 1465 aa17.95■□□□□ 0.46
SPG21-214ENST00000561088 LAMC1P11047 1609 aa17.94■□□□□ 0.46
SPG21-214ENST00000561088 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
SPG21-214ENST00000561088 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
SPG21-214ENST00000561088 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
SPG21-214ENST00000561088 MST1RQ04912 1400 aa17.9■□□□□ 0.46
SPG21-214ENST00000561088 ASXL1Q8IXJ9 1541 aa17.9■□□□□ 0.46
SPG21-214ENST00000561088 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
SPG21-214ENST00000561088 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
SPG21-214ENST00000561088 LRPPRCP42704 1394 aaKnown RBP17.9■□□□□ 0.46
SPG21-214ENST00000561088 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.46
SPG21-214ENST00000561088 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
SPG21-214ENST00000561088 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
SPG21-214ENST00000561088 AHDC1Q5TGY3 1603 aaPredicted RBP17.89■□□□□ 0.45
SPG21-214ENST00000561088 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.45
SPG21-214ENST00000561088 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
SPG21-214ENST00000561088 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
SPG21-214ENST00000561088 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
SPG21-214ENST00000561088 JCADQ9P266 1359 aa17.87■□□□□ 0.45
SPG21-214ENST00000561088 TECPR2O15040 1411 aa17.87■□□□□ 0.45
SPG21-214ENST00000561088 ILDR2Q71H61 639 aa17.86■□□□□ 0.45
SPG21-214ENST00000561088 WAPLQ7Z5K2 1190 aa17.86■□□□□ 0.45
SPG21-214ENST00000561088 ABCC11Q96J66 1382 aa17.86■□□□□ 0.45
SPG21-214ENST00000561088 C1orf167Q5SNV9 1468 aa17.85■□□□□ 0.45
SPG21-214ENST00000561088 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
SPG21-214ENST00000561088 NHSL1Q5SYE7 1610 aa17.83■□□□□ 0.45
SPG21-214ENST00000561088 STAC3Q96MF2 364 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms