RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 RIMS2Q9UQ26 1411 aa22.74■■□□□ 1.23
SNRPA1-213ENST00000560856 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
SNRPA1-213ENST00000560856 ILDR1Q86SU0 546 aaPredicted RBP22.68■■□□□ 1.22
SNRPA1-213ENST00000560856 PLEKHG1Q9ULL1 1385 aa22.67■■□□□ 1.22
SNRPA1-213ENST00000560856 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNRPA1-213ENST00000560856 FBXO41Q8TF61 875 aa22.66■■□□□ 1.22
SNRPA1-213ENST00000560856 NUTM2DQ5VT03 806 aaPredicted RBP22.65■■□□□ 1.22
SNRPA1-213ENST00000560856 SLC26A8Q96RN1 970 aa22.64■■□□□ 1.21
SNRPA1-213ENST00000560856 STRCP1A6NGW2 1772 aa22.63■■□□□ 1.21
SNRPA1-213ENST00000560856 IQSEC2Q5JU85 1478 aa22.62■■□□□ 1.21
SNRPA1-213ENST00000560856 PPP1R15AO75807 674 aaPredicted RBP22.62■■□□□ 1.21
SNRPA1-213ENST00000560856 CPS1P31327 1500 aa22.62■■□□□ 1.21
SNRPA1-213ENST00000560856 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
SNRPA1-213ENST00000560856 KIF1BO60333 1816 aa22.61■■□□□ 1.21
SNRPA1-213ENST00000560856 ADAMTS13Q76LX8 1427 aa22.6■■□□□ 1.21
SNRPA1-213ENST00000560856 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
SNRPA1-213ENST00000560856 CCDC144AA2RUR9 1427 aa22.59■■□□□ 1.21
SNRPA1-213ENST00000560856 NEXMIFQ5QGS0 1516 aa22.59■■□□□ 1.21
SNRPA1-213ENST00000560856 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
SNRPA1-213ENST00000560856 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
SNRPA1-213ENST00000560856 KCNA6P17658 529 aa22.57■■□□□ 1.2
SNRPA1-213ENST00000560856 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
SNRPA1-213ENST00000560856 BCANQ96GW7 911 aa22.56■■□□□ 1.2
SNRPA1-213ENST00000560856 RPGRIP1LQ68CZ1 1315 aa22.56■■□□□ 1.2
SNRPA1-213ENST00000560856 LRRC7Q96NW7 1537 aa22.55■■□□□ 1.2
SNRPA1-213ENST00000560856 NRXN3Q9Y4C0 1643 aa22.53■■□□□ 1.2
SNRPA1-213ENST00000560856 SETBP1Q9Y6X0 1596 aa22.52■■□□□ 1.2
SNRPA1-213ENST00000560856 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
SNRPA1-213ENST00000560856 NWD1Q149M9 1564 aa22.5■■□□□ 1.19
SNRPA1-213ENST00000560856 VGFO15240 615 aaPredicted RBP22.5■■□□□ 1.19
SNRPA1-213ENST00000560856 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
SNRPA1-213ENST00000560856 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
SNRPA1-213ENST00000560856 PIK3R4Q99570 1358 aa22.49■■□□□ 1.19
SNRPA1-213ENST00000560856 CHD2O14647 1828 aaKnown RBP22.48■■□□□ 1.19
SNRPA1-213ENST00000560856 PPLO60437 1756 aa22.48■■□□□ 1.19
SNRPA1-213ENST00000560856 PTPRUQ92729 1446 aa22.47■■□□□ 1.19
SNRPA1-213ENST00000560856 UBAP1LF5GYI3 381 aa22.45■■□□□ 1.18
SNRPA1-213ENST00000560856 METP08581 1390 aa22.45■■□□□ 1.18
SNRPA1-213ENST00000560856 NKTRP30414 1462 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-213ENST00000560856 TMEM94Q12767 1356 aa22.44■■□□□ 1.18
SNRPA1-213ENST00000560856 XIRP1Q702N8 1843 aaKnown RBP22.44■■□□□ 1.18
SNRPA1-213ENST00000560856 PROSER2Q86WR7 435 aaPredicted RBP22.44■■□□□ 1.18
SNRPA1-213ENST00000560856 ADGRF5Q8IZF2 1346 aa22.44■■□□□ 1.18
SNRPA1-213ENST00000560856 ALKQ9UM73 1620 aa22.43■■□□□ 1.18
SNRPA1-213ENST00000560856 RBM33Q96EV2 1170 aaKnown RBP22.42■■□□□ 1.18
SNRPA1-213ENST00000560856 AMOTL2Q9Y2J4 779 aa22.42■■□□□ 1.18
SNRPA1-213ENST00000560856 IFT172Q9UG01 1749 aa22.41■■□□□ 1.18
SNRPA1-213ENST00000560856 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.17
SNRPA1-213ENST00000560856 TOM1O60784 492 aa22.38■■□□□ 1.17
SNRPA1-213ENST00000560856 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
SNRPA1-213ENST00000560856 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
SNRPA1-213ENST00000560856 PIK3C2GO75747 1445 aa22.35■■□□□ 1.17
SNRPA1-213ENST00000560856 NCOA3Q9Y6Q9 1424 aa22.34■■□□□ 1.17
SNRPA1-213ENST00000560856 MYOM2P54296 1465 aa22.34■■□□□ 1.17
SNRPA1-213ENST00000560856 DHX57Q6P158 1386 aaKnown RBP22.33■■□□□ 1.17
SNRPA1-213ENST00000560856 PIP4K2BP78356 416 aa22.3■■□□□ 1.16
SNRPA1-213ENST00000560856 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
SNRPA1-213ENST00000560856 PRAG1Q86YV5 1406 aa22.3■■□□□ 1.16
SNRPA1-213ENST00000560856 ASXL1Q8IXJ9 1541 aa22.28■■□□□ 1.16
SNRPA1-213ENST00000560856 MSH6P52701 1360 aa22.27■■□□□ 1.16
SNRPA1-213ENST00000560856 DCAF11Q8TEB1 546 aa22.27■■□□□ 1.16
SNRPA1-213ENST00000560856 ROBO2Q9HCK4 1378 aa22.26■■□□□ 1.15
SNRPA1-213ENST00000560856 CFAP70Q5T0N1 1121 aa22.26■■□□□ 1.15
SNRPA1-213ENST00000560856 TMEM132EQ6IEE7 984 aa22.26■■□□□ 1.15
SNRPA1-213ENST00000560856 STAC3Q96MF2 364 aa22.26■■□□□ 1.15
SNRPA1-213ENST00000560856 C19orf44Q9H6X5 657 aa22.26■■□□□ 1.15
SNRPA1-213ENST00000560856 PTCH1Q13635 1447 aa22.25■■□□□ 1.15
SNRPA1-213ENST00000560856 SIN3AQ96ST3 1273 aa22.25■■□□□ 1.15
SNRPA1-213ENST00000560856 KDM2AQ9Y2K7 1162 aa22.25■■□□□ 1.15
SNRPA1-213ENST00000560856 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
SNRPA1-213ENST00000560856 LRPPRCP42704 1394 aaKnown RBP22.24■■□□□ 1.15
SNRPA1-213ENST00000560856 ABCC11Q96J66 1382 aa22.23■■□□□ 1.15
SNRPA1-213ENST00000560856 TECPR2O15040 1411 aa22.22■■□□□ 1.15
SNRPA1-213ENST00000560856 FAM135BQ49AJ0 1406 aa22.22■■□□□ 1.15
SNRPA1-213ENST00000560856 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.21■■□□□ 1.15
SNRPA1-213ENST00000560856 HSPA1LP34931 641 aa22.21■■□□□ 1.15
SNRPA1-213ENST00000560856 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
SNRPA1-213ENST00000560856 SLAIN2Q9P270 581 aa22.2■■□□□ 1.14
SNRPA1-213ENST00000560856 YTHDC2Q9H6S0 1430 aaKnown RBP22.2■■□□□ 1.14
SNRPA1-213ENST00000560856 STK26Q9P289 416 aa22.19■■□□□ 1.14
SNRPA1-213ENST00000560856 ADGRL3Q9HAR2 1447 aa22.19■■□□□ 1.14
SNRPA1-213ENST00000560856 DCCP43146 1447 aa22.18■■□□□ 1.14
SNRPA1-213ENST00000560856 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
SNRPA1-213ENST00000560856 LAMC1P11047 1609 aa22.17■■□□□ 1.14
SNRPA1-213ENST00000560856 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
SNRPA1-213ENST00000560856 ATF3P18847 181 aa22.16■■□□□ 1.14
SNRPA1-213ENST00000560856 L3MBTL2Q969R5 705 aa22.16■■□□□ 1.14
SNRPA1-213ENST00000560856 SIRT1Q96EB6 747 aa22.16■■□□□ 1.14
SNRPA1-213ENST00000560856 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
SNRPA1-213ENST00000560856 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.14
SNRPA1-213ENST00000560856 NEUROD1Q13562 356 aa22.14■■□□□ 1.13
SNRPA1-213ENST00000560856 WAPLQ7Z5K2 1190 aa22.14■■□□□ 1.13
SNRPA1-213ENST00000560856 KNDC1Q76NI1 1749 aa22.14■■□□□ 1.13
SNRPA1-213ENST00000560856 PLEKHH1Q9ULM0 1364 aa22.13■■□□□ 1.13
SNRPA1-213ENST00000560856 MST1RQ04912 1400 aa22.12■■□□□ 1.13
SNRPA1-213ENST00000560856 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
SNRPA1-213ENST00000560856 DLC1Q96QB1 1528 aa22.08■■□□□ 1.13
SNRPA1-213ENST00000560856 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
SNRPA1-213ENST00000560856 NBPF1Q3BBV0 1214 aa22.06■■□□□ 1.12
SNRPA1-213ENST00000560856 PRAM1Q96QH2 718 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms