RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 ALKQ9UM73 1620 aa27.19■■□□□ 1.94
TNFAIP2-206ENST00000560428 CHGAP10645 457 aaKnown RBP27.17■■□□□ 1.94
TNFAIP2-206ENST00000560428 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.17■■□□□ 1.94
TNFAIP2-206ENST00000560428 SLC26A8Q96RN1 970 aa27.17■■□□□ 1.94
TNFAIP2-206ENST00000560428 NWD1Q149M9 1564 aa27.17■■□□□ 1.94
TNFAIP2-206ENST00000560428 XIRP1Q702N8 1843 aaKnown RBP27.16■■□□□ 1.94
TNFAIP2-206ENST00000560428 PPP1R15AO75807 674 aaPredicted RBP27.16■■□□□ 1.94
TNFAIP2-206ENST00000560428 KCNA6P17658 529 aa27.16■■□□□ 1.94
TNFAIP2-206ENST00000560428 PIP4K2BP78356 416 aa27.14■■□□□ 1.94
TNFAIP2-206ENST00000560428 SCAF1Q9H7N4 1312 aaKnown RBP27.14■■□□□ 1.93
TNFAIP2-206ENST00000560428 NKTRP30414 1462 aaKnown RBP27.13■■□□□ 1.93
TNFAIP2-206ENST00000560428 TRPM2O94759 1503 aa27.12■■□□□ 1.93
TNFAIP2-206ENST00000560428 BCANQ96GW7 911 aa27.12■■□□□ 1.93
TNFAIP2-206ENST00000560428 DIP2AQ14689 1571 aa27.1■■□□□ 1.93
TNFAIP2-206ENST00000560428 CHD2O14647 1828 aaKnown RBP27.08■■□□□ 1.93
TNFAIP2-206ENST00000560428 TBX22Q9Y458 520 aa27.07■■□□□ 1.92
TNFAIP2-206ENST00000560428 CLTCL1P53675 1640 aa27.07■■□□□ 1.92
TNFAIP2-206ENST00000560428 TMEM94Q12767 1356 aa27.07■■□□□ 1.92
TNFAIP2-206ENST00000560428 TRIM52Q96A61 297 aa27.06■■□□□ 1.92
TNFAIP2-206ENST00000560428 ADAMTS13Q76LX8 1427 aa27.06■■□□□ 1.92
TNFAIP2-206ENST00000560428 HSPA1LP34931 641 aa27.05■■□□□ 1.92
TNFAIP2-206ENST00000560428 PROSER2Q86WR7 435 aaPredicted RBP27.03■■□□□ 1.92
TNFAIP2-206ENST00000560428 DISP3Q9P2K9 1392 aa27.03■■□□□ 1.92
TNFAIP2-206ENST00000560428 PIK3R4Q99570 1358 aa27.02■■□□□ 1.92
TNFAIP2-206ENST00000560428 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
TNFAIP2-206ENST00000560428 KIF1BO60333 1816 aa27.02■■□□□ 1.92
TNFAIP2-206ENST00000560428 SLC4A1APQ9BWU0 796 aaKnown RBP27■■□□□ 1.91
TNFAIP2-206ENST00000560428 SENP3Q9H4L4 574 aaPredicted RBP27■■□□□ 1.91
TNFAIP2-206ENST00000560428 SETBP1Q9Y6X0 1596 aa26.99■■□□□ 1.91
TNFAIP2-206ENST00000560428 NEXMIFQ5QGS0 1516 aa26.97■■□□□ 1.91
TNFAIP2-206ENST00000560428 ZNF326Q5BKZ1 582 aaKnown RBP26.97■■□□□ 1.91
TNFAIP2-206ENST00000560428 NRXN3Q9Y4C0 1643 aa26.97■■□□□ 1.91
TNFAIP2-206ENST00000560428 NCOA3Q9Y6Q9 1424 aa26.95■■□□□ 1.9
TNFAIP2-206ENST00000560428 MSH6P52701 1360 aa26.94■■□□□ 1.9
TNFAIP2-206ENST00000560428 FAM135BQ49AJ0 1406 aa26.93■■□□□ 1.9
TNFAIP2-206ENST00000560428 ACIN1Q9UKV3 1341 aaKnown RBP26.92■■□□□ 1.9
TNFAIP2-206ENST00000560428 RBM33Q96EV2 1170 aaKnown RBP26.92■■□□□ 1.9
TNFAIP2-206ENST00000560428 PTPRUQ92729 1446 aa26.88■■□□□ 1.89
TNFAIP2-206ENST00000560428 XRN1Q8IZH2 1706 aaKnown RBP26.87■■□□□ 1.89
TNFAIP2-206ENST00000560428 MED1Q15648 1581 aaPredicted RBP26.87■■□□□ 1.89
TNFAIP2-206ENST00000560428 ROBO1Q9Y6N7 1651 aa26.86■■□□□ 1.89
TNFAIP2-206ENST00000560428 SETD5Q9C0A6 1442 aa26.85■■□□□ 1.89
TNFAIP2-206ENST00000560428 AMOTL2Q9Y2J4 779 aa26.85■■□□□ 1.89
TNFAIP2-206ENST00000560428 RPGRIP1LQ68CZ1 1315 aa26.85■■□□□ 1.89
TNFAIP2-206ENST00000560428 MPHOSPH9Q99550 1183 aa26.84■■□□□ 1.89
TNFAIP2-206ENST00000560428 PPLO60437 1756 aa26.82■■□□□ 1.88
TNFAIP2-206ENST00000560428 VGFO15240 615 aaPredicted RBP26.82■■□□□ 1.88
TNFAIP2-206ENST00000560428 CCDC144AA2RUR9 1427 aa26.82■■□□□ 1.88
TNFAIP2-206ENST00000560428 FOXD1Q16676 465 aa26.81■■□□□ 1.88
TNFAIP2-206ENST00000560428 METP08581 1390 aa26.81■■□□□ 1.88
TNFAIP2-206ENST00000560428 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.8■■□□□ 1.88
TNFAIP2-206ENST00000560428 SLAIN2Q9P270 581 aa26.8■■□□□ 1.88
TNFAIP2-206ENST00000560428 ILDR2Q71H61 639 aa26.79■■□□□ 1.88
TNFAIP2-206ENST00000560428 C14orf37Q86TY3 774 aa26.79■■□□□ 1.88
TNFAIP2-206ENST00000560428 C19orf44Q9H6X5 657 aa26.78■■□□□ 1.88
TNFAIP2-206ENST00000560428 SETD1AO15047 1707 aaKnown RBP26.77■■□□□ 1.88
TNFAIP2-206ENST00000560428 CADPS2Q86UW7 1296 aa26.76■■□□□ 1.87
TNFAIP2-206ENST00000560428 DCCP43146 1447 aa26.75■■□□□ 1.87
TNFAIP2-206ENST00000560428 SPATA31E1Q6ZUB1 1445 aa26.74■■□□□ 1.87
TNFAIP2-206ENST00000560428 RAB3GAP2Q9H2M9 1393 aa26.74■■□□□ 1.87
TNFAIP2-206ENST00000560428 ATF3P18847 181 aa26.72■■□□□ 1.87
TNFAIP2-206ENST00000560428 IFT172Q9UG01 1749 aa26.71■■□□□ 1.87
TNFAIP2-206ENST00000560428 PRAG1Q86YV5 1406 aa26.7■■□□□ 1.86
TNFAIP2-206ENST00000560428 PHLPP1O60346 1717 aa26.7■■□□□ 1.86
TNFAIP2-206ENST00000560428 PTCH1Q13635 1447 aa26.69■■□□□ 1.86
TNFAIP2-206ENST00000560428 ANKRD30BQ9BXX2 1392 aa26.68■■□□□ 1.86
TNFAIP2-206ENST00000560428 ADGRL3Q9HAR2 1447 aa26.67■■□□□ 1.86
TNFAIP2-206ENST00000560428 NALCNQ8IZF0 1738 aa26.65■■□□□ 1.86
TNFAIP2-206ENST00000560428 AHDC1Q5TGY3 1603 aaPredicted RBP26.65■■□□□ 1.86
TNFAIP2-206ENST00000560428 COL16A1Q07092 1604 aaPredicted RBP26.64■■□□□ 1.85
TNFAIP2-206ENST00000560428 RGL3Q3MIN7 710 aa26.63■■□□□ 1.85
TNFAIP2-206ENST00000560428 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
TNFAIP2-206ENST00000560428 HRCP23327 699 aa26.62■■□□□ 1.85
TNFAIP2-206ENST00000560428 ADGRF5Q8IZF2 1346 aa26.62■■□□□ 1.85
TNFAIP2-206ENST00000560428 SOCS7O14512 581 aa26.61■■□□□ 1.85
TNFAIP2-206ENST00000560428 MST1RQ04912 1400 aa26.61■■□□□ 1.85
TNFAIP2-206ENST00000560428 ROBO2Q9HCK4 1378 aa26.59■■□□□ 1.85
TNFAIP2-206ENST00000560428 JCADQ9P266 1359 aa26.59■■□□□ 1.85
TNFAIP2-206ENST00000560428 PIK3C2GO75747 1445 aa26.58■■□□□ 1.85
TNFAIP2-206ENST00000560428 BRINP3Q76B58 766 aa26.58■■□□□ 1.85
TNFAIP2-206ENST00000560428 ASXL1Q8IXJ9 1541 aa26.57■■□□□ 1.84
TNFAIP2-206ENST00000560428 MYOM2P54296 1465 aa26.55■■□□□ 1.84
TNFAIP2-206ENST00000560428 TECPR2O15040 1411 aa26.54■■□□□ 1.84
TNFAIP2-206ENST00000560428 NRXN1Q9ULB1 1477 aa26.53■■□□□ 1.84
TNFAIP2-206ENST00000560428 NHSL1Q5SYE7 1610 aa26.53■■□□□ 1.84
TNFAIP2-206ENST00000560428 KNDC1Q76NI1 1749 aa26.52■■□□□ 1.84
TNFAIP2-206ENST00000560428 SHPRHQ149N8 1683 aa26.51■■□□□ 1.83
TNFAIP2-206ENST00000560428 LAMC1P11047 1609 aa26.5■■□□□ 1.83
TNFAIP2-206ENST00000560428 LRPPRCP42704 1394 aaKnown RBP26.5■■□□□ 1.83
TNFAIP2-206ENST00000560428 C1orf167Q5SNV9 1468 aa26.49■■□□□ 1.83
TNFAIP2-206ENST00000560428 ABCC11Q96J66 1382 aa26.48■■□□□ 1.83
TNFAIP2-206ENST00000560428 SPATA31A6Q5VVP1 1343 aa26.47■■□□□ 1.83
TNFAIP2-206ENST00000560428 CDC42BPGQ6DT37 1551 aa26.47■■□□□ 1.83
TNFAIP2-206ENST00000560428 RGS17Q9UGC6 210 aaPredicted RBP26.46■■□□□ 1.83
TNFAIP2-206ENST00000560428 C14orf93Q9H972 538 aaKnown RBP26.45■■□□□ 1.82
TNFAIP2-206ENST00000560428 YTHDC2Q9H6S0 1430 aaKnown RBP26.44■■□□□ 1.82
TNFAIP2-206ENST00000560428 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
TNFAIP2-206ENST00000560428 STK26Q9P289 416 aa26.42■■□□□ 1.82
TNFAIP2-206ENST00000560428 LRP6O75581 1613 aa26.4■■□□□ 1.82
TNFAIP2-206ENST00000560428 SIRT1Q96EB6 747 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms