RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CLTCL1P53675 1640 aa17.48■□□□□ 0.39
RABGGTA-216ENST00000560243 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
RABGGTA-216ENST00000560243 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-216ENST00000560243 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
RABGGTA-216ENST00000560243 TRPM2O94759 1503 aa17.47■□□□□ 0.39
RABGGTA-216ENST00000560243 PLEKHG1Q9ULL1 1385 aa17.45■□□□□ 0.38
RABGGTA-216ENST00000560243 PPP1R15AO75807 674 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-216ENST00000560243 FOXD1Q16676 465 aa17.45■□□□□ 0.38
RABGGTA-216ENST00000560243 BCANQ96GW7 911 aa17.45■□□□□ 0.38
RABGGTA-216ENST00000560243 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
RABGGTA-216ENST00000560243 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-216ENST00000560243 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-216ENST00000560243 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
RABGGTA-216ENST00000560243 ALKQ9UM73 1620 aa17.42■□□□□ 0.38
RABGGTA-216ENST00000560243 KIF1BO60333 1816 aa17.4■□□□□ 0.38
RABGGTA-216ENST00000560243 ADAMTS13Q76LX8 1427 aa17.4■□□□□ 0.38
RABGGTA-216ENST00000560243 KCNA6P17658 529 aa17.4■□□□□ 0.38
RABGGTA-216ENST00000560243 ZNF326Q5BKZ1 582 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-216ENST00000560243 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
RABGGTA-216ENST00000560243 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-216ENST00000560243 RAB3GAP2Q9H2M9 1393 aa17.39■□□□□ 0.37
RABGGTA-216ENST00000560243 NWD1Q149M9 1564 aa17.38■□□□□ 0.37
RABGGTA-216ENST00000560243 PIP4K2BP78356 416 aa17.38■□□□□ 0.37
RABGGTA-216ENST00000560243 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-216ENST00000560243 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
RABGGTA-216ENST00000560243 TOM1O60784 492 aa17.37■□□□□ 0.37
RABGGTA-216ENST00000560243 TBX22Q9Y458 520 aa17.37■□□□□ 0.37
RABGGTA-216ENST00000560243 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-216ENST00000560243 NRXN3Q9Y4C0 1643 aa17.36■□□□□ 0.37
RABGGTA-216ENST00000560243 TMEM94Q12767 1356 aa17.36■□□□□ 0.37
RABGGTA-216ENST00000560243 PROSER2Q86WR7 435 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-216ENST00000560243 DIP2AQ14689 1571 aa17.33■□□□□ 0.37
RABGGTA-216ENST00000560243 NKTRP30414 1462 aaKnown RBP17.33■□□□□ 0.37
RABGGTA-216ENST00000560243 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
RABGGTA-216ENST00000560243 PTPRUQ92729 1446 aa17.31■□□□□ 0.36
RABGGTA-216ENST00000560243 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
RABGGTA-216ENST00000560243 HSPA1LP34931 641 aa17.3■□□□□ 0.36
RABGGTA-216ENST00000560243 PPLO60437 1756 aa17.29■□□□□ 0.36
RABGGTA-216ENST00000560243 METP08581 1390 aa17.28■□□□□ 0.36
RABGGTA-216ENST00000560243 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
RABGGTA-216ENST00000560243 SPATA31E1Q6ZUB1 1445 aa17.28■□□□□ 0.36
RABGGTA-216ENST00000560243 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-216ENST00000560243 AMOTL2Q9Y2J4 779 aa17.27■□□□□ 0.36
RABGGTA-216ENST00000560243 RGL3Q3MIN7 710 aa17.26■□□□□ 0.35
RABGGTA-216ENST00000560243 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
RABGGTA-216ENST00000560243 XRN1Q8IZH2 1706 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-216ENST00000560243 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-216ENST00000560243 SETD1AO15047 1707 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-216ENST00000560243 IFT172Q9UG01 1749 aa17.23■□□□□ 0.35
RABGGTA-216ENST00000560243 MSH6P52701 1360 aa17.23■□□□□ 0.35
RABGGTA-216ENST00000560243 ADGRF5Q8IZF2 1346 aa17.22■□□□□ 0.35
RABGGTA-216ENST00000560243 HRCP23327 699 aa17.22■□□□□ 0.35
RABGGTA-216ENST00000560243 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
RABGGTA-216ENST00000560243 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
RABGGTA-216ENST00000560243 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-216ENST00000560243 NCOA3Q9Y6Q9 1424 aa17.19■□□□□ 0.34
RABGGTA-216ENST00000560243 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
RABGGTA-216ENST00000560243 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
RABGGTA-216ENST00000560243 SLAIN2Q9P270 581 aa17.17■□□□□ 0.34
RABGGTA-216ENST00000560243 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
RABGGTA-216ENST00000560243 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
RABGGTA-216ENST00000560243 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
RABGGTA-216ENST00000560243 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
RABGGTA-216ENST00000560243 ATF3P18847 181 aa17.13■□□□□ 0.33
RABGGTA-216ENST00000560243 NALCNQ8IZF0 1738 aa17.13■□□□□ 0.33
RABGGTA-216ENST00000560243 ASXL1Q8IXJ9 1541 aa17.12■□□□□ 0.33
RABGGTA-216ENST00000560243 TMEM132EQ6IEE7 984 aa17.11■□□□□ 0.33
RABGGTA-216ENST00000560243 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
RABGGTA-216ENST00000560243 PTCH1Q13635 1447 aa17.11■□□□□ 0.33
RABGGTA-216ENST00000560243 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
RABGGTA-216ENST00000560243 PRAG1Q86YV5 1406 aa17.1■□□□□ 0.33
RABGGTA-216ENST00000560243 NRXN1Q9ULB1 1477 aa17.1■□□□□ 0.33
RABGGTA-216ENST00000560243 MED1Q15648 1581 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-216ENST00000560243 STK26Q9P289 416 aa17.09■□□□□ 0.33
RABGGTA-216ENST00000560243 DCCP43146 1447 aa17.09■□□□□ 0.33
RABGGTA-216ENST00000560243 MYOM2P54296 1465 aa17.09■□□□□ 0.33
RABGGTA-216ENST00000560243 PHLPP1O60346 1717 aa17.07■□□□□ 0.32
RABGGTA-216ENST00000560243 MST1RQ04912 1400 aa17.07■□□□□ 0.32
RABGGTA-216ENST00000560243 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
RABGGTA-216ENST00000560243 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-216ENST00000560243 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-216ENST00000560243 ILDR2Q71H61 639 aa17.05■□□□□ 0.32
RABGGTA-216ENST00000560243 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
RABGGTA-216ENST00000560243 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
RABGGTA-216ENST00000560243 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-216ENST00000560243 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-216ENST00000560243 WAPLQ7Z5K2 1190 aa17.04■□□□□ 0.32
RABGGTA-216ENST00000560243 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
RABGGTA-216ENST00000560243 TECPR2O15040 1411 aa17.04■□□□□ 0.32
RABGGTA-216ENST00000560243 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-216ENST00000560243 ABCC11Q96J66 1382 aa17.03■□□□□ 0.32
RABGGTA-216ENST00000560243 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
RABGGTA-216ENST00000560243 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
RABGGTA-216ENST00000560243 LAMC1P11047 1609 aa17.03■□□□□ 0.32
RABGGTA-216ENST00000560243 AHDC1Q5TGY3 1603 aaPredicted RBP17.02■□□□□ 0.31
RABGGTA-216ENST00000560243 DDX17Q92841 729 aaKnown RBP17■□□□□ 0.31
RABGGTA-216ENST00000560243 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
RABGGTA-216ENST00000560243 ADGRB1O14514 1584 aa16.98■□□□□ 0.31
RABGGTA-216ENST00000560243 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
RABGGTA-216ENST00000560243 CDC42BPGQ6DT37 1551 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms