RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
CLPX-206ENST00000560166 IGF1RP08069 1367 aa10.01□□□□□ -0.81
CLPX-206ENST00000560166 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
CLPX-206ENST00000560166 GOLGA3Q08378 1498 aa10.01□□□□□ -0.81
CLPX-206ENST00000560166 COL9A1P20849 921 aa10□□□□□ -0.81
CLPX-206ENST00000560166 FAM9AQ8IZU1 332 aaPredicted RBP10□□□□□ -0.81
CLPX-206ENST00000560166 ERCC6L2Q5T890 1561 aa10□□□□□ -0.81
CLPX-206ENST00000560166 ONECUT3O60422 494 aaPredicted RBP9.99□□□□□ -0.81
CLPX-206ENST00000560166 FAM69CQ0P6D2 419 aa9.98□□□□□ -0.81
CLPX-206ENST00000560166 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
CLPX-206ENST00000560166 PCDHGA10Q9Y5H3 936 aa9.98□□□□□ -0.81
CLPX-206ENST00000560166 KIF13AQ9H1H9 1805 aa9.98□□□□□ -0.81
CLPX-206ENST00000560166 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
CLPX-206ENST00000560166 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
CLPX-206ENST00000560166 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
CLPX-206ENST00000560166 CUL7Q14999 1698 aa9.96□□□□□ -0.81
CLPX-206ENST00000560166 PDE4AP27815 886 aa9.95□□□□□ -0.82
CLPX-206ENST00000560166 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
CLPX-206ENST00000560166 CARMIL1Q5VZK9 1371 aa9.95□□□□□ -0.82
CLPX-206ENST00000560166 RAPGEF2Q9Y4G8 1499 aa9.95□□□□□ -0.82
CLPX-206ENST00000560166 PBRM1Q86U86 1689 aa9.94□□□□□ -0.82
CLPX-206ENST00000560166 LOC105371045A0A1W2PR82 267 aa9.93□□□□□ -0.82
CLPX-206ENST00000560166 TSR3Q9UJK0 312 aaKnown RBP9.93□□□□□ -0.82
CLPX-206ENST00000560166 KDM6BO15054 1643 aa9.93□□□□□ -0.82
CLPX-206ENST00000560166 CEP170Q5SW79 1584 aa9.92□□□□□ -0.82
CLPX-206ENST00000560166 FHAD1B1AJZ9 1412 aa9.92□□□□□ -0.82
CLPX-206ENST00000560166 GTPBP6O43824 516 aaPredicted RBP9.92□□□□□ -0.82
CLPX-206ENST00000560166 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
CLPX-206ENST00000560166 NBR1Q14596 966 aa9.92□□□□□ -0.82
CLPX-206ENST00000560166 ZNF787Q6DD87 383 aa9.92□□□□□ -0.82
CLPX-206ENST00000560166 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
CLPX-206ENST00000560166 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
CLPX-206ENST00000560166 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.82
CLPX-206ENST00000560166 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
CLPX-206ENST00000560166 ABCC10Q5T3U5 1492 aa9.9□□□□□ -0.83
CLPX-206ENST00000560166 ADAMTS12P58397 1594 aa9.89□□□□□ -0.83
CLPX-206ENST00000560166 ZNF775Q96BV0 537 aaPredicted RBP9.89□□□□□ -0.83
CLPX-206ENST00000560166 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
CLPX-206ENST00000560166 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
CLPX-206ENST00000560166 V9GY48 417 aaPredicted RBP9.89□□□□□ -0.83
CLPX-206ENST00000560166 GRIN2AQ12879 1464 aa9.89□□□□□ -0.83
CLPX-206ENST00000560166 PHF14O94880 888 aa9.88□□□□□ -0.83
CLPX-206ENST00000560166 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
CLPX-206ENST00000560166 UBTFP17480 764 aaKnown RBP9.87□□□□□ -0.83
CLPX-206ENST00000560166 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
CLPX-206ENST00000560166 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
CLPX-206ENST00000560166 TSPOAP1O95153 1857 aa9.86□□□□□ -0.83
CLPX-206ENST00000560166 TJAP1Q5JTD0 557 aa9.86□□□□□ -0.83
CLPX-206ENST00000560166 CEP162Q5TB80 1403 aa9.86□□□□□ -0.83
CLPX-206ENST00000560166 HECW2Q9P2P5 1572 aa9.86□□□□□ -0.83
CLPX-206ENST00000560166 ADGRL1O94910 1474 aa9.85□□□□□ -0.83
CLPX-206ENST00000560166 DIP2BQ9P265 1576 aa9.85□□□□□ -0.83
CLPX-206ENST00000560166 PRG4Q92954 1404 aaPredicted RBP9.85□□□□□ -0.83
CLPX-206ENST00000560166 TRIM6-TRIM34B2RNG4 842 aa9.85□□□□□ -0.83
CLPX-206ENST00000560166 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
CLPX-206ENST00000560166 NUP160Q12769 1436 aa9.84□□□□□ -0.83
CLPX-206ENST00000560166 C6orf132Q5T0Z8 1188 aa9.84□□□□□ -0.83
CLPX-206ENST00000560166 DDX27Q96GQ7 796 aaKnown RBP9.84□□□□□ -0.83
CLPX-206ENST00000560166 SHROOM2Q13796 1616 aa9.83□□□□□ -0.84
CLPX-206ENST00000560166 FBXO41Q8TF61 875 aa9.83□□□□□ -0.84
CLPX-206ENST00000560166 LARP6Q9BRS8 491 aaKnown RBP9.83□□□□□ -0.84
CLPX-206ENST00000560166 MFSD10Q14728 455 aa9.82□□□□□ -0.84
CLPX-206ENST00000560166 PPP1R18Q6NYC8 613 aa9.82□□□□□ -0.84
CLPX-206ENST00000560166 CLIP1P30622 1438 aa9.82□□□□□ -0.84
CLPX-206ENST00000560166 MAPKBP1O60336 1514 aa9.81□□□□□ -0.84
CLPX-206ENST00000560166 PPP4CP60510 307 aa9.8□□□□□ -0.84
CLPX-206ENST00000560166 EPAS1Q99814 870 aa9.8□□□□□ -0.84
CLPX-206ENST00000560166 EFCAB5A4FU69 1503 aa9.79□□□□□ -0.84
CLPX-206ENST00000560166 KIAA0586Q9BVV6 1533 aa9.79□□□□□ -0.84
CLPX-206ENST00000560166 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
CLPX-206ENST00000560166 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.85
CLPX-206ENST00000560166 ADCY10Q96PN6 1610 aa9.76□□□□□ -0.85
CLPX-206ENST00000560166 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
CLPX-206ENST00000560166 CTTNBP2Q8WZ74 1663 aa9.76□□□□□ -0.85
CLPX-206ENST00000560166 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
CLPX-206ENST00000560166 LMTK3Q96Q04 1460 aa9.75□□□□□ -0.85
CLPX-206ENST00000560166 MTRQ99707 1265 aa9.75□□□□□ -0.85
CLPX-206ENST00000560166 UGGT2Q9NYU1 1516 aa9.75□□□□□ -0.85
CLPX-206ENST00000560166 IQGAP2Q13576 1575 aa9.75□□□□□ -0.85
CLPX-206ENST00000560166 VPS8Q8N3P4 1428 aa9.74□□□□□ -0.85
CLPX-206ENST00000560166 ARHGAP35Q9NRY4 1499 aa9.74□□□□□ -0.85
CLPX-206ENST00000560166 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
CLPX-206ENST00000560166 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
CLPX-206ENST00000560166 SAMD9Q5K651 1589 aa9.71□□□□□ -0.85
CLPX-206ENST00000560166 ZNF516Q92618 1163 aa9.71□□□□□ -0.86
CLPX-206ENST00000560166 FMN1Q68DA7 1419 aa9.69□□□□□ -0.86
CLPX-206ENST00000560166 SAMD7Q7Z3H4 446 aa9.68□□□□□ -0.86
CLPX-206ENST00000560166 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
CLPX-206ENST00000560166 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
CLPX-206ENST00000560166 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
CLPX-206ENST00000560166 DISP1Q96F81 1524 aa9.66□□□□□ -0.86
CLPX-206ENST00000560166 ASXL2Q76L83 1435 aa9.65□□□□□ -0.86
CLPX-206ENST00000560166 PPRC1Q5VV67 1664 aaKnown RBP9.65□□□□□ -0.86
CLPX-206ENST00000560166 NKX2-3Q8TAU0 364 aa9.65□□□□□ -0.86
CLPX-206ENST00000560166 FYCO1Q9BQS8 1478 aa9.65□□□□□ -0.87
CLPX-206ENST00000560166 COL17A1Q9UMD9 1497 aaPredicted RBP9.65□□□□□ -0.87
CLPX-206ENST00000560166 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.87
CLPX-206ENST00000560166 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
CLPX-206ENST00000560166 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
CLPX-206ENST00000560166 TRIM67Q6ZTA4 783 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms