RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 UBAP1LF5GYI3 381 aa25.87■■□□□ 1.73
AC105339.3-201ENST00000560043 SPHKAPQ2M3C7 1700 aa25.87■■□□□ 1.73
AC105339.3-201ENST00000560043 SLC26A8Q96RN1 970 aa25.85■■□□□ 1.73
AC105339.3-201ENST00000560043 PLEKHG1Q9ULL1 1385 aa25.83■■□□□ 1.73
AC105339.3-201ENST00000560043 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.73
AC105339.3-201ENST00000560043 SETD5Q9C0A6 1442 aa25.81■■□□□ 1.72
AC105339.3-201ENST00000560043 TRPM2O94759 1503 aa25.81■■□□□ 1.72
AC105339.3-201ENST00000560043 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
AC105339.3-201ENST00000560043 NUTM2DQ5VT03 806 aaPredicted RBP25.8■■□□□ 1.72
AC105339.3-201ENST00000560043 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
AC105339.3-201ENST00000560043 LRRC7Q96NW7 1537 aa25.79■■□□□ 1.72
AC105339.3-201ENST00000560043 KCNA6P17658 529 aa25.79■■□□□ 1.72
AC105339.3-201ENST00000560043 TOM1O60784 492 aa25.78■■□□□ 1.72
AC105339.3-201ENST00000560043 ZNF326Q5BKZ1 582 aaKnown RBP25.78■■□□□ 1.72
AC105339.3-201ENST00000560043 MPHOSPH9Q99550 1183 aa25.76■■□□□ 1.71
AC105339.3-201ENST00000560043 CLTCL1P53675 1640 aa25.76■■□□□ 1.71
AC105339.3-201ENST00000560043 TBX22Q9Y458 520 aa25.75■■□□□ 1.71
AC105339.3-201ENST00000560043 FOXD1Q16676 465 aa25.73■■□□□ 1.71
AC105339.3-201ENST00000560043 PROSER2Q86WR7 435 aaPredicted RBP25.7■■□□□ 1.7
AC105339.3-201ENST00000560043 RAB3GAP2Q9H2M9 1393 aa25.69■■□□□ 1.7
AC105339.3-201ENST00000560043 SCAF1Q9H7N4 1312 aaKnown RBP25.69■■□□□ 1.7
AC105339.3-201ENST00000560043 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
AC105339.3-201ENST00000560043 KIF1BO60333 1816 aa25.69■■□□□ 1.7
AC105339.3-201ENST00000560043 ADAMTS13Q76LX8 1427 aa25.69■■□□□ 1.7
AC105339.3-201ENST00000560043 DIP2AQ14689 1571 aa25.66■■□□□ 1.7
AC105339.3-201ENST00000560043 TMEM94Q12767 1356 aa25.66■■□□□ 1.7
AC105339.3-201ENST00000560043 NKTRP30414 1462 aaKnown RBP25.66■■□□□ 1.7
AC105339.3-201ENST00000560043 NWD1Q149M9 1564 aa25.65■■□□□ 1.7
AC105339.3-201ENST00000560043 PIK3R4Q99570 1358 aa25.65■■□□□ 1.7
AC105339.3-201ENST00000560043 RPGRIP1LQ68CZ1 1315 aa25.63■■□□□ 1.69
AC105339.3-201ENST00000560043 NEXMIFQ5QGS0 1516 aa25.63■■□□□ 1.69
AC105339.3-201ENST00000560043 CCDC144AA2RUR9 1427 aa25.63■■□□□ 1.69
AC105339.3-201ENST00000560043 VGFO15240 615 aaPredicted RBP25.62■■□□□ 1.69
AC105339.3-201ENST00000560043 CHD2O14647 1828 aaKnown RBP25.62■■□□□ 1.69
AC105339.3-201ENST00000560043 HRCP23327 699 aa25.61■■□□□ 1.69
AC105339.3-201ENST00000560043 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
AC105339.3-201ENST00000560043 SETBP1Q9Y6X0 1596 aa25.6■■□□□ 1.69
AC105339.3-201ENST00000560043 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
AC105339.3-201ENST00000560043 XIRP1Q702N8 1843 aaKnown RBP25.59■■□□□ 1.69
AC105339.3-201ENST00000560043 AMOTL2Q9Y2J4 779 aa25.57■■□□□ 1.68
AC105339.3-201ENST00000560043 NRXN3Q9Y4C0 1643 aa25.55■■□□□ 1.68
AC105339.3-201ENST00000560043 HSPA1LP34931 641 aa25.54■■□□□ 1.68
AC105339.3-201ENST00000560043 RGL3Q3MIN7 710 aa25.54■■□□□ 1.68
AC105339.3-201ENST00000560043 MSH6P52701 1360 aa25.54■■□□□ 1.68
AC105339.3-201ENST00000560043 PTPRUQ92729 1446 aa25.53■■□□□ 1.68
AC105339.3-201ENST00000560043 NCOA3Q9Y6Q9 1424 aa25.53■■□□□ 1.68
AC105339.3-201ENST00000560043 METP08581 1390 aa25.52■■□□□ 1.68
AC105339.3-201ENST00000560043 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
AC105339.3-201ENST00000560043 C14orf37Q86TY3 774 aa25.5■■□□□ 1.67
AC105339.3-201ENST00000560043 PPLO60437 1756 aa25.48■■□□□ 1.67
AC105339.3-201ENST00000560043 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
AC105339.3-201ENST00000560043 C19orf44Q9H6X5 657 aa25.45■■□□□ 1.66
AC105339.3-201ENST00000560043 FAM135BQ49AJ0 1406 aa25.45■■□□□ 1.66
AC105339.3-201ENST00000560043 XRN1Q8IZH2 1706 aaKnown RBP25.43■■□□□ 1.66
AC105339.3-201ENST00000560043 ADGRF5Q8IZF2 1346 aa25.43■■□□□ 1.66
AC105339.3-201ENST00000560043 SLAIN2Q9P270 581 aa25.43■■□□□ 1.66
AC105339.3-201ENST00000560043 ATF3P18847 181 aa25.4■■□□□ 1.66
AC105339.3-201ENST00000560043 CADPS2Q86UW7 1296 aa25.4■■□□□ 1.66
AC105339.3-201ENST00000560043 DISP3Q9P2K9 1392 aa25.37■■□□□ 1.65
AC105339.3-201ENST00000560043 SETD1AO15047 1707 aaKnown RBP25.37■■□□□ 1.65
AC105339.3-201ENST00000560043 IFT172Q9UG01 1749 aa25.36■■□□□ 1.65
AC105339.3-201ENST00000560043 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.34■■□□□ 1.65
AC105339.3-201ENST00000560043 ROBO1Q9Y6N7 1651 aa25.33■■□□□ 1.65
AC105339.3-201ENST00000560043 DCCP43146 1447 aa25.33■■□□□ 1.65
AC105339.3-201ENST00000560043 PIK3C2GO75747 1445 aa25.32■■□□□ 1.64
AC105339.3-201ENST00000560043 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
AC105339.3-201ENST00000560043 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
AC105339.3-201ENST00000560043 PRAG1Q86YV5 1406 aa25.3■■□□□ 1.64
AC105339.3-201ENST00000560043 ADGRL3Q9HAR2 1447 aa25.29■■□□□ 1.64
AC105339.3-201ENST00000560043 MYOM2P54296 1465 aa25.29■■□□□ 1.64
AC105339.3-201ENST00000560043 C14orf93Q9H972 538 aaKnown RBP25.28■■□□□ 1.64
AC105339.3-201ENST00000560043 TMEM132EQ6IEE7 984 aa25.27■■□□□ 1.64
AC105339.3-201ENST00000560043 STK26Q9P289 416 aa25.27■■□□□ 1.64
AC105339.3-201ENST00000560043 NRXN1Q9ULB1 1477 aa25.27■■□□□ 1.64
AC105339.3-201ENST00000560043 LRPPRCP42704 1394 aaKnown RBP25.26■■□□□ 1.63
AC105339.3-201ENST00000560043 STAC3Q96MF2 364 aa25.25■■□□□ 1.63
AC105339.3-201ENST00000560043 CFAP70Q5T0N1 1121 aa25.24■■□□□ 1.63
AC105339.3-201ENST00000560043 DCAF11Q8TEB1 546 aa25.24■■□□□ 1.63
AC105339.3-201ENST00000560043 ABCC11Q96J66 1382 aa25.23■■□□□ 1.63
AC105339.3-201ENST00000560043 KDM2AQ9Y2K7 1162 aa25.23■■□□□ 1.63
AC105339.3-201ENST00000560043 MST1RQ04912 1400 aa25.22■■□□□ 1.63
AC105339.3-201ENST00000560043 TECPR2O15040 1411 aa25.21■■□□□ 1.63
AC105339.3-201ENST00000560043 NALCNQ8IZF0 1738 aa25.21■■□□□ 1.63
AC105339.3-201ENST00000560043 BRINP3Q76B58 766 aa25.21■■□□□ 1.63
AC105339.3-201ENST00000560043 ASXL1Q8IXJ9 1541 aa25.21■■□□□ 1.63
AC105339.3-201ENST00000560043 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.63
AC105339.3-201ENST00000560043 MED1Q15648 1581 aaPredicted RBP25.2■■□□□ 1.62
AC105339.3-201ENST00000560043 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
AC105339.3-201ENST00000560043 PHLPP1O60346 1717 aa25.19■■□□□ 1.62
AC105339.3-201ENST00000560043 WAPLQ7Z5K2 1190 aa25.18■■□□□ 1.62
AC105339.3-201ENST00000560043 LAMC1P11047 1609 aa25.18■■□□□ 1.62
AC105339.3-201ENST00000560043 SIRT1Q96EB6 747 aa25.17■■□□□ 1.62
AC105339.3-201ENST00000560043 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
AC105339.3-201ENST00000560043 AHDC1Q5TGY3 1603 aaPredicted RBP25.14■■□□□ 1.61
AC105339.3-201ENST00000560043 JCADQ9P266 1359 aa25.14■■□□□ 1.61
AC105339.3-201ENST00000560043 KNDC1Q76NI1 1749 aa25.14■■□□□ 1.61
AC105339.3-201ENST00000560043 C1orf167Q5SNV9 1468 aa25.14■■□□□ 1.61
AC105339.3-201ENST00000560043 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
AC105339.3-201ENST00000560043 PLEKHH1Q9ULM0 1364 aa25.12■■□□□ 1.61
AC105339.3-201ENST00000560043 COL16A1Q07092 1604 aaPredicted RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms