RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 SLC26A8Q96RN1 970 aa31.01■■■□□ 2.55
CHRNA3-207ENST00000559941 SCAF1Q9H7N4 1312 aaKnown RBP30.99■■■□□ 2.55
CHRNA3-207ENST00000559941 CHGAP10645 457 aaKnown RBP30.99■■■□□ 2.55
CHRNA3-207ENST00000559941 PLEKHG1Q9ULL1 1385 aa30.97■■■□□ 2.55
CHRNA3-207ENST00000559941 KCNA6P17658 529 aa30.97■■■□□ 2.55
CHRNA3-207ENST00000559941 SPHKAPQ2M3C7 1700 aa30.97■■■□□ 2.55
CHRNA3-207ENST00000559941 BCANQ96GW7 911 aa30.95■■■□□ 2.55
CHRNA3-207ENST00000559941 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.94■■■□□ 2.54
CHRNA3-207ENST00000559941 HFM1A2PYH4 1435 aa30.93■■■□□ 2.54
CHRNA3-207ENST00000559941 PPP1R15AO75807 674 aaPredicted RBP30.93■■■□□ 2.54
CHRNA3-207ENST00000559941 DISP3Q9P2K9 1392 aa30.92■■■□□ 2.54
CHRNA3-207ENST00000559941 HSPA1LP34931 641 aa30.91■■■□□ 2.54
CHRNA3-207ENST00000559941 NWD1Q149M9 1564 aa30.91■■■□□ 2.54
CHRNA3-207ENST00000559941 CHD2O14647 1828 aaKnown RBP30.89■■■□□ 2.53
CHRNA3-207ENST00000559941 NKTRP30414 1462 aaKnown RBP30.87■■■□□ 2.53
CHRNA3-207ENST00000559941 SENP3Q9H4L4 574 aaPredicted RBP30.86■■■□□ 2.53
CHRNA3-207ENST00000559941 TBX22Q9Y458 520 aa30.86■■■□□ 2.53
CHRNA3-207ENST00000559941 TMEM94Q12767 1356 aa30.86■■■□□ 2.53
CHRNA3-207ENST00000559941 PROSER2Q86WR7 435 aaPredicted RBP30.85■■■□□ 2.53
CHRNA3-207ENST00000559941 NUTM2DQ5VT03 806 aaPredicted RBP30.84■■■□□ 2.53
CHRNA3-207ENST00000559941 ADAMTS13Q76LX8 1427 aa30.81■■■□□ 2.52
CHRNA3-207ENST00000559941 TRIM52Q96A61 297 aa30.81■■■□□ 2.52
CHRNA3-207ENST00000559941 TRPM2O94759 1503 aa30.81■■■□□ 2.52
CHRNA3-207ENST00000559941 DIP2AQ14689 1571 aa30.8■■■□□ 2.52
CHRNA3-207ENST00000559941 CLTCL1P53675 1640 aa30.8■■■□□ 2.52
CHRNA3-207ENST00000559941 KIF1BO60333 1816 aa30.77■■■□□ 2.52
CHRNA3-207ENST00000559941 RBM33Q96EV2 1170 aaKnown RBP30.76■■■□□ 2.51
CHRNA3-207ENST00000559941 PIK3R4Q99570 1358 aa30.75■■■□□ 2.51
CHRNA3-207ENST00000559941 ZNF326Q5BKZ1 582 aaKnown RBP30.74■■■□□ 2.51
CHRNA3-207ENST00000559941 SLC4A1APQ9BWU0 796 aaKnown RBP30.73■■■□□ 2.51
CHRNA3-207ENST00000559941 FAM135BQ49AJ0 1406 aa30.71■■■□□ 2.51
CHRNA3-207ENST00000559941 NRXN3Q9Y4C0 1643 aa30.7■■■□□ 2.51
CHRNA3-207ENST00000559941 ILDR2Q71H61 639 aa30.7■■■□□ 2.51
CHRNA3-207ENST00000559941 MSH6P52701 1360 aa30.69■■■□□ 2.5
CHRNA3-207ENST00000559941 SETBP1Q9Y6X0 1596 aa30.69■■■□□ 2.5
CHRNA3-207ENST00000559941 NEXMIFQ5QGS0 1516 aa30.68■■■□□ 2.5
CHRNA3-207ENST00000559941 NCOA3Q9Y6Q9 1424 aa30.67■■■□□ 2.5
CHRNA3-207ENST00000559941 MED1Q15648 1581 aaPredicted RBP30.66■■■□□ 2.5
CHRNA3-207ENST00000559941 PTPRUQ92729 1446 aa30.64■■■□□ 2.49
CHRNA3-207ENST00000559941 ROBO1Q9Y6N7 1651 aa30.63■■■□□ 2.49
CHRNA3-207ENST00000559941 AMOTL2Q9Y2J4 779 aa30.62■■■□□ 2.49
CHRNA3-207ENST00000559941 SLAIN2Q9P270 581 aa30.58■■■□□ 2.49
CHRNA3-207ENST00000559941 XRN1Q8IZH2 1706 aaKnown RBP30.58■■■□□ 2.49
CHRNA3-207ENST00000559941 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.56■■■□□ 2.48
CHRNA3-207ENST00000559941 FOXD1Q16676 465 aa30.55■■■□□ 2.48
CHRNA3-207ENST00000559941 C14orf37Q86TY3 774 aa30.55■■■□□ 2.48
CHRNA3-207ENST00000559941 MPHOSPH9Q99550 1183 aa30.55■■■□□ 2.48
CHRNA3-207ENST00000559941 METP08581 1390 aa30.54■■■□□ 2.48
CHRNA3-207ENST00000559941 RPGRIP1LQ68CZ1 1315 aa30.54■■■□□ 2.48
CHRNA3-207ENST00000559941 ACIN1Q9UKV3 1341 aaKnown RBP30.53■■■□□ 2.48
CHRNA3-207ENST00000559941 VGFO15240 615 aaPredicted RBP30.53■■■□□ 2.48
CHRNA3-207ENST00000559941 C19orf44Q9H6X5 657 aa30.53■■■□□ 2.48
CHRNA3-207ENST00000559941 PPLO60437 1756 aa30.52■■■□□ 2.48
CHRNA3-207ENST00000559941 SETD5Q9C0A6 1442 aa30.51■■■□□ 2.47
CHRNA3-207ENST00000559941 CADPS2Q86UW7 1296 aa30.5■■■□□ 2.47
CHRNA3-207ENST00000559941 SETD1AO15047 1707 aaKnown RBP30.48■■■□□ 2.47
CHRNA3-207ENST00000559941 CCDC144AA2RUR9 1427 aa30.47■■■□□ 2.47
CHRNA3-207ENST00000559941 ATF3P18847 181 aa30.47■■■□□ 2.47
CHRNA3-207ENST00000559941 SOCS7O14512 581 aa30.46■■■□□ 2.47
CHRNA3-207ENST00000559941 PHLPP1O60346 1717 aa30.45■■■□□ 2.47
CHRNA3-207ENST00000559941 DCCP43146 1447 aa30.42■■■□□ 2.46
CHRNA3-207ENST00000559941 PHF23Q9BUL5 403 aaPredicted RBP30.42■■■□□ 2.46
CHRNA3-207ENST00000559941 SPATA31E1Q6ZUB1 1445 aa30.4■■■□□ 2.46
CHRNA3-207ENST00000559941 RAB3GAP2Q9H2M9 1393 aa30.39■■■□□ 2.45
CHRNA3-207ENST00000559941 IFT172Q9UG01 1749 aa30.39■■■□□ 2.45
CHRNA3-207ENST00000559941 RGL3Q3MIN7 710 aa30.36■■■□□ 2.45
CHRNA3-207ENST00000559941 COL16A1Q07092 1604 aaPredicted RBP30.36■■■□□ 2.45
CHRNA3-207ENST00000559941 PTCH1Q13635 1447 aa30.35■■■□□ 2.45
CHRNA3-207ENST00000559941 ADGRL3Q9HAR2 1447 aa30.35■■■□□ 2.45
CHRNA3-207ENST00000559941 NALCNQ8IZF0 1738 aa30.35■■■□□ 2.45
CHRNA3-207ENST00000559941 AHDC1Q5TGY3 1603 aaPredicted RBP30.34■■■□□ 2.45
CHRNA3-207ENST00000559941 PRAG1Q86YV5 1406 aa30.33■■■□□ 2.45
CHRNA3-207ENST00000559941 ADGRF5Q8IZF2 1346 aa30.33■■■□□ 2.45
CHRNA3-207ENST00000559941 ANKRD30BQ9BXX2 1392 aa30.32■■■□□ 2.44
CHRNA3-207ENST00000559941 JCADQ9P266 1359 aa30.32■■■□□ 2.44
CHRNA3-207ENST00000559941 MST1RQ04912 1400 aa30.31■■■□□ 2.44
CHRNA3-207ENST00000559941 BRINP3Q76B58 766 aa30.31■■■□□ 2.44
CHRNA3-207ENST00000559941 ROBO2Q9HCK4 1378 aa30.29■■■□□ 2.44
CHRNA3-207ENST00000559941 RGS17Q9UGC6 210 aaPredicted RBP30.26■■■□□ 2.43
CHRNA3-207ENST00000559941 ASXL1Q8IXJ9 1541 aa30.26■■■□□ 2.43
CHRNA3-207ENST00000559941 HRCP23327 699 aa30.23■■■□□ 2.43
CHRNA3-207ENST00000559941 NHSL1Q5SYE7 1610 aa30.22■■■□□ 2.43
CHRNA3-207ENST00000559941 PIK3C2GO75747 1445 aa30.22■■■□□ 2.43
CHRNA3-207ENST00000559941 SHPRHQ149N8 1683 aa30.21■■■□□ 2.43
CHRNA3-207ENST00000559941 SPATA31A6Q5VVP1 1343 aa30.18■■■□□ 2.42
CHRNA3-207ENST00000559941 C1orf167Q5SNV9 1468 aa30.18■■■□□ 2.42
CHRNA3-207ENST00000559941 TECPR2O15040 1411 aa30.16■■■□□ 2.42
CHRNA3-207ENST00000559941 KNDC1Q76NI1 1749 aa30.16■■■□□ 2.42
CHRNA3-207ENST00000559941 LRPPRCP42704 1394 aaKnown RBP30.15■■■□□ 2.42
CHRNA3-207ENST00000559941 MYOM2P54296 1465 aa30.14■■■□□ 2.42
CHRNA3-207ENST00000559941 NRXN1Q9ULB1 1477 aa30.14■■■□□ 2.42
CHRNA3-207ENST00000559941 TMEM132EQ6IEE7 984 aa30.14■■■□□ 2.42
CHRNA3-207ENST00000559941 ABCC11Q96J66 1382 aa30.14■■■□□ 2.41
CHRNA3-207ENST00000559941 STK26Q9P289 416 aa30.13■■■□□ 2.41
CHRNA3-207ENST00000559941 C14orf93Q9H972 538 aaKnown RBP30.12■■■□□ 2.41
CHRNA3-207ENST00000559941 LRP6O75581 1613 aa30.11■■■□□ 2.41
CHRNA3-207ENST00000559941 CDC42BPGQ6DT37 1551 aa30.1■■■□□ 2.41
CHRNA3-207ENST00000559941 LAMC1P11047 1609 aa30.1■■■□□ 2.41
CHRNA3-207ENST00000559941 POTEAQ6S8J7 498 aa30.09■■■□□ 2.41
CHRNA3-207ENST00000559941 WAPLQ7Z5K2 1190 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms