RNA–Protein interactions for RNA: ENST00000559560.1

PBX1-216, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-216ENST00000559560 RIMS2Q9UQ26 1411 aa33.57■■■□□ 2.96
PBX1-216ENST00000559560 CLTCL1P53675 1640 aa33.53■■■□□ 2.96
PBX1-216ENST00000559560 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.53■■■□□ 2.96
PBX1-216ENST00000559560 PPP1R15AO75807 674 aaPredicted RBP33.5■■■□□ 2.95
PBX1-216ENST00000559560 RAB3GAP2Q9H2M9 1393 aa33.49■■■□□ 2.95
PBX1-216ENST00000559560 PLEKHG1Q9ULL1 1385 aa33.49■■■□□ 2.95
PBX1-216ENST00000559560 KIF1BO60333 1816 aa33.49■■■□□ 2.95
PBX1-216ENST00000559560 MPHOSPH9Q99550 1183 aa33.47■■■□□ 2.95
PBX1-216ENST00000559560 STRCP1A6NGW2 1772 aa33.44■■■□□ 2.94
PBX1-216ENST00000559560 BCANQ96GW7 911 aa33.42■■■□□ 2.94
PBX1-216ENST00000559560 ZNF326Q5BKZ1 582 aaKnown RBP33.39■■■□□ 2.94
PBX1-216ENST00000559560 SLC26A8Q96RN1 970 aa33.39■■■□□ 2.94
PBX1-216ENST00000559560 HRCP23327 699 aa33.38■■■□□ 2.93
PBX1-216ENST00000559560 FOXD1Q16676 465 aa33.37■■■□□ 2.93
PBX1-216ENST00000559560 DIP2AQ14689 1571 aa33.37■■■□□ 2.93
PBX1-216ENST00000559560 LRRC7Q96NW7 1537 aa33.35■■■□□ 2.93
PBX1-216ENST00000559560 CCDC144AA2RUR9 1427 aa33.35■■■□□ 2.93
PBX1-216ENST00000559560 NEXMIFQ5QGS0 1516 aa33.33■■■□□ 2.93
PBX1-216ENST00000559560 KCNA6P17658 529 aa33.33■■■□□ 2.93
PBX1-216ENST00000559560 NUTM2DQ5VT03 806 aaPredicted RBP33.33■■■□□ 2.93
PBX1-216ENST00000559560 NWD1Q149M9 1564 aa33.32■■■□□ 2.92
PBX1-216ENST00000559560 TBX22Q9Y458 520 aa33.32■■■□□ 2.92
PBX1-216ENST00000559560 ADAMTS13Q76LX8 1427 aa33.3■■■□□ 2.92
PBX1-216ENST00000559560 UBAP1LF5GYI3 381 aa33.28■■■□□ 2.92
PBX1-216ENST00000559560 NKTRP30414 1462 aaKnown RBP33.28■■■□□ 2.92
PBX1-216ENST00000559560 SETBP1Q9Y6X0 1596 aa33.28■■■□□ 2.92
PBX1-216ENST00000559560 RPGRIP1LQ68CZ1 1315 aa33.28■■■□□ 2.92
PBX1-216ENST00000559560 CHD2O14647 1828 aaKnown RBP33.27■■■□□ 2.92
PBX1-216ENST00000559560 PIK3R4Q99570 1358 aa33.26■■■□□ 2.92
PBX1-216ENST00000559560 SENP3Q9H4L4 574 aaPredicted RBP33.25■■■□□ 2.91
PBX1-216ENST00000559560 NRXN3Q9Y4C0 1643 aa33.24■■■□□ 2.91
PBX1-216ENST00000559560 TOM1O60784 492 aa33.22■■■□□ 2.91
PBX1-216ENST00000559560 PPLO60437 1756 aa33.21■■■□□ 2.91
PBX1-216ENST00000559560 XIRP1Q702N8 1843 aaKnown RBP33.21■■■□□ 2.91
PBX1-216ENST00000559560 VGFO15240 615 aaPredicted RBP33.2■■■□□ 2.91
PBX1-216ENST00000559560 SPATA31E1Q6ZUB1 1445 aa33.19■■■□□ 2.9
PBX1-216ENST00000559560 PROSER2Q86WR7 435 aaPredicted RBP33.16■■■□□ 2.9
PBX1-216ENST00000559560 TMEM94Q12767 1356 aa33.16■■■□□ 2.9
PBX1-216ENST00000559560 ANKRD30BQ9BXX2 1392 aa33.11■■■□□ 2.89
PBX1-216ENST00000559560 IFT172Q9UG01 1749 aa33.11■■■□□ 2.89
PBX1-216ENST00000559560 ALKQ9UM73 1620 aa33.1■■■□□ 2.89
PBX1-216ENST00000559560 RGL3Q3MIN7 710 aa33.08■■■□□ 2.89
PBX1-216ENST00000559560 NCOA3Q9Y6Q9 1424 aa33.08■■■□□ 2.89
PBX1-216ENST00000559560 XRN1Q8IZH2 1706 aaKnown RBP33.07■■■□□ 2.88
PBX1-216ENST00000559560 PTPRUQ92729 1446 aa33.06■■■□□ 2.88
PBX1-216ENST00000559560 PIP4K2BP78356 416 aa33.05■■■□□ 2.88
PBX1-216ENST00000559560 AMOTL2Q9Y2J4 779 aa33.05■■■□□ 2.88
PBX1-216ENST00000559560 METP08581 1390 aa33.05■■■□□ 2.88
PBX1-216ENST00000559560 SCAF1Q9H7N4 1312 aaKnown RBP33.04■■■□□ 2.88
PBX1-216ENST00000559560 SETD1AO15047 1707 aaKnown RBP33.04■■■□□ 2.88
PBX1-216ENST00000559560 MSH6P52701 1360 aa33.02■■■□□ 2.88
PBX1-216ENST00000559560 RBM33Q96EV2 1170 aaKnown RBP32.99■■■□□ 2.87
PBX1-216ENST00000559560 ADGRF5Q8IZF2 1346 aa32.98■■■□□ 2.87
PBX1-216ENST00000559560 MYOM2P54296 1465 aa32.95■■■□□ 2.87
PBX1-216ENST00000559560 PIK3C2GO75747 1445 aa32.94■■■□□ 2.86
PBX1-216ENST00000559560 C14orf37Q86TY3 774 aa32.93■■■□□ 2.86
PBX1-216ENST00000559560 TRIM26Q12899 539 aaPredicted RBP32.92■■■□□ 2.86
PBX1-216ENST00000559560 PRAG1Q86YV5 1406 aa32.92■■■□□ 2.86
PBX1-216ENST00000559560 PTCH1Q13635 1447 aa32.91■■■□□ 2.86
PBX1-216ENST00000559560 NRXN1Q9ULB1 1477 aa32.91■■■□□ 2.86
PBX1-216ENST00000559560 C19orf44Q9H6X5 657 aa32.89■■■□□ 2.86
PBX1-216ENST00000559560 FAM135BQ49AJ0 1406 aa32.88■■■□□ 2.85
PBX1-216ENST00000559560 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.88■■■□□ 2.85
PBX1-216ENST00000559560 HSPA1LP34931 641 aa32.86■■■□□ 2.85
PBX1-216ENST00000559560 LAMC1P11047 1609 aa32.86■■■□□ 2.85
PBX1-216ENST00000559560 DCCP43146 1447 aa32.85■■■□□ 2.85
PBX1-216ENST00000559560 CADPS2Q86UW7 1296 aa32.85■■■□□ 2.85
PBX1-216ENST00000559560 STAC3Q96MF2 364 aa32.84■■■□□ 2.85
PBX1-216ENST00000559560 ATF3P18847 181 aa32.82■■■□□ 2.84
PBX1-216ENST00000559560 ROBO1Q9Y6N7 1651 aa32.82■■■□□ 2.84
PBX1-216ENST00000559560 ADGRL3Q9HAR2 1447 aa32.81■■■□□ 2.84
PBX1-216ENST00000559560 SLAIN2Q9P270 581 aa32.81■■■□□ 2.84
PBX1-216ENST00000559560 ASXL1Q8IXJ9 1541 aa32.79■■■□□ 2.84
PBX1-216ENST00000559560 C14orf93Q9H972 538 aaKnown RBP32.79■■■□□ 2.84
PBX1-216ENST00000559560 ROBO2Q9HCK4 1378 aa32.79■■■□□ 2.84
PBX1-216ENST00000559560 LRPPRCP42704 1394 aaKnown RBP32.78■■■□□ 2.84
PBX1-216ENST00000559560 TECPR2O15040 1411 aa32.77■■■□□ 2.84
PBX1-216ENST00000559560 KNDC1Q76NI1 1749 aa32.77■■■□□ 2.84
PBX1-216ENST00000559560 NALCNQ8IZF0 1738 aa32.77■■■□□ 2.84
PBX1-216ENST00000559560 DCAF11Q8TEB1 546 aa32.76■■■□□ 2.83
PBX1-216ENST00000559560 ABCC11Q96J66 1382 aa32.74■■■□□ 2.83
PBX1-216ENST00000559560 DHX57Q6P158 1386 aaKnown RBP32.73■■■□□ 2.83
PBX1-216ENST00000559560 YTHDC2Q9H6S0 1430 aaKnown RBP32.72■■■□□ 2.83
PBX1-216ENST00000559560 CFAP70Q5T0N1 1121 aa32.71■■■□□ 2.83
PBX1-216ENST00000559560 TMEM132EQ6IEE7 984 aa32.71■■■□□ 2.83
PBX1-216ENST00000559560 KDM2AQ9Y2K7 1162 aa32.71■■■□□ 2.83
PBX1-216ENST00000559560 STK26Q9P289 416 aa32.68■■■□□ 2.82
PBX1-216ENST00000559560 MST1RQ04912 1400 aa32.67■■■□□ 2.82
PBX1-216ENST00000559560 SIRT1Q96EB6 747 aa32.64■■■□□ 2.82
PBX1-216ENST00000559560 ADGRB1O14514 1584 aa32.63■■■□□ 2.81
PBX1-216ENST00000559560 PHLPP1O60346 1717 aa32.62■■■□□ 2.81
PBX1-216ENST00000559560 CDC42BPGQ6DT37 1551 aa32.61■■■□□ 2.81
PBX1-216ENST00000559560 DLC1Q96QB1 1528 aa32.6■■■□□ 2.81
PBX1-216ENST00000559560 AHDC1Q5TGY3 1603 aaPredicted RBP32.59■■■□□ 2.81
PBX1-216ENST00000559560 BRINP3Q76B58 766 aa32.57■■■□□ 2.8
PBX1-216ENST00000559560 WAPLQ7Z5K2 1190 aa32.57■■■□□ 2.8
PBX1-216ENST00000559560 KIAA1210Q9ULL0 1709 aa32.56■■■□□ 2.8
PBX1-216ENST00000559560 C1orf167Q5SNV9 1468 aa32.55■■■□□ 2.8
PBX1-216ENST00000559560 PLEKHH1Q9ULM0 1364 aa32.55■■■□□ 2.8
PBX1-216ENST00000559560 COL16A1Q07092 1604 aaPredicted RBP32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms