RNA–Protein interactions for RNA: ENST00000558820.5

TRIP4-205, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 2

Gene TRIP4, Length 847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-205ENST00000558820 PIP4K2BP78356 416 aa29.57■■■□□ 2.32
TRIP4-205ENST00000558820 SCAF1Q9H7N4 1312 aaKnown RBP29.56■■■□□ 2.32
TRIP4-205ENST00000558820 DISP3Q9P2K9 1392 aa29.55■■■□□ 2.32
TRIP4-205ENST00000558820 PLEKHG1Q9ULL1 1385 aa29.55■■■□□ 2.32
TRIP4-205ENST00000558820 CHD2O14647 1828 aaKnown RBP29.55■■■□□ 2.32
TRIP4-205ENST00000558820 SLC26A8Q96RN1 970 aa29.53■■■□□ 2.32
TRIP4-205ENST00000558820 NKTRP30414 1462 aaKnown RBP29.51■■■□□ 2.31
TRIP4-205ENST00000558820 KCNA6P17658 529 aa29.51■■■□□ 2.31
TRIP4-205ENST00000558820 HSPA1LP34931 641 aa29.5■■■□□ 2.31
TRIP4-205ENST00000558820 HDGFP51858 240 aaKnown RBP29.5■■■□□ 2.31
TRIP4-205ENST00000558820 HFM1A2PYH4 1435 aa29.49■■■□□ 2.31
TRIP4-205ENST00000558820 CHGAP10645 457 aaKnown RBP29.48■■■□□ 2.31
TRIP4-205ENST00000558820 PPP1R15AO75807 674 aaPredicted RBP29.47■■■□□ 2.31
TRIP4-205ENST00000558820 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.46■■■□□ 2.31
TRIP4-205ENST00000558820 DIP2AQ14689 1571 aa29.46■■■□□ 2.31
TRIP4-205ENST00000558820 TMEM94Q12767 1356 aa29.45■■■□□ 2.31
TRIP4-205ENST00000558820 BCANQ96GW7 911 aa29.45■■■□□ 2.31
TRIP4-205ENST00000558820 TRPM2O94759 1503 aa29.44■■■□□ 2.3
TRIP4-205ENST00000558820 CLTCL1P53675 1640 aa29.43■■■□□ 2.3
TRIP4-205ENST00000558820 KIF1BO60333 1816 aa29.42■■■□□ 2.3
TRIP4-205ENST00000558820 ADAMTS13Q76LX8 1427 aa29.41■■■□□ 2.3
TRIP4-205ENST00000558820 PROSER2Q86WR7 435 aaPredicted RBP29.39■■■□□ 2.3
TRIP4-205ENST00000558820 SENP3Q9H4L4 574 aaPredicted RBP29.39■■■□□ 2.3
TRIP4-205ENST00000558820 TBX22Q9Y458 520 aa29.39■■■□□ 2.3
TRIP4-205ENST00000558820 MED1Q15648 1581 aaPredicted RBP29.38■■■□□ 2.29
TRIP4-205ENST00000558820 NRXN3Q9Y4C0 1643 aa29.38■■■□□ 2.29
TRIP4-205ENST00000558820 NUTM2DQ5VT03 806 aaPredicted RBP29.37■■■□□ 2.29
TRIP4-205ENST00000558820 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
TRIP4-205ENST00000558820 SETBP1Q9Y6X0 1596 aa29.34■■■□□ 2.29
TRIP4-205ENST00000558820 PIK3R4Q99570 1358 aa29.33■■■□□ 2.29
TRIP4-205ENST00000558820 ROBO1Q9Y6N7 1651 aa29.31■■■□□ 2.28
TRIP4-205ENST00000558820 NEXMIFQ5QGS0 1516 aa29.31■■■□□ 2.28
TRIP4-205ENST00000558820 FAM135BQ49AJ0 1406 aa29.31■■■□□ 2.28
TRIP4-205ENST00000558820 RBM33Q96EV2 1170 aaKnown RBP29.31■■■□□ 2.28
TRIP4-205ENST00000558820 TRIM52Q96A61 297 aa29.29■■■□□ 2.28
TRIP4-205ENST00000558820 MSH6P52701 1360 aa29.28■■■□□ 2.28
TRIP4-205ENST00000558820 XRN1Q8IZH2 1706 aaKnown RBP29.27■■■□□ 2.28
TRIP4-205ENST00000558820 NCOA3Q9Y6Q9 1424 aa29.27■■■□□ 2.28
TRIP4-205ENST00000558820 ZNF326Q5BKZ1 582 aaKnown RBP29.25■■■□□ 2.27
TRIP4-205ENST00000558820 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.23■■■□□ 2.27
TRIP4-205ENST00000558820 PTPRUQ92729 1446 aa29.23■■■□□ 2.27
TRIP4-205ENST00000558820 SLC4A1APQ9BWU0 796 aaKnown RBP29.23■■■□□ 2.27
TRIP4-205ENST00000558820 PPLO60437 1756 aa29.2■■■□□ 2.26
TRIP4-205ENST00000558820 SETD1AO15047 1707 aaKnown RBP29.18■■■□□ 2.26
TRIP4-205ENST00000558820 AMOTL2Q9Y2J4 779 aa29.16■■■□□ 2.26
TRIP4-205ENST00000558820 SLAIN2Q9P270 581 aa29.15■■■□□ 2.26
TRIP4-205ENST00000558820 PHLPP1O60346 1717 aa29.14■■■□□ 2.26
TRIP4-205ENST00000558820 METP08581 1390 aa29.13■■■□□ 2.25
TRIP4-205ENST00000558820 SOCS7O14512 581 aa29.12■■■□□ 2.25
TRIP4-205ENST00000558820 C14orf37Q86TY3 774 aa29.1■■■□□ 2.25
TRIP4-205ENST00000558820 C19orf44Q9H6X5 657 aa29.1■■■□□ 2.25
TRIP4-205ENST00000558820 FOXD1Q16676 465 aa29.08■■■□□ 2.25
TRIP4-205ENST00000558820 RPGRIP1LQ68CZ1 1315 aa29.08■■■□□ 2.25
TRIP4-205ENST00000558820 IFT172Q9UG01 1749 aa29.08■■■□□ 2.25
TRIP4-205ENST00000558820 DCCP43146 1447 aa29.07■■■□□ 2.24
TRIP4-205ENST00000558820 CADPS2Q86UW7 1296 aa29.07■■■□□ 2.24
TRIP4-205ENST00000558820 COL16A1Q07092 1604 aaPredicted RBP29.06■■■□□ 2.24
TRIP4-205ENST00000558820 VGFO15240 615 aaPredicted RBP29.05■■■□□ 2.24
TRIP4-205ENST00000558820 MPHOSPH9Q99550 1183 aa29.05■■■□□ 2.24
TRIP4-205ENST00000558820 NALCNQ8IZF0 1738 aa29.05■■■□□ 2.24
TRIP4-205ENST00000558820 CCDC144AA2RUR9 1427 aa29.04■■■□□ 2.24
TRIP4-205ENST00000558820 SETD5Q9C0A6 1442 aa29.04■■■□□ 2.24
TRIP4-205ENST00000558820 ACIN1Q9UKV3 1341 aaKnown RBP29.03■■■□□ 2.24
TRIP4-205ENST00000558820 ATF3P18847 181 aa29.03■■■□□ 2.24
TRIP4-205ENST00000558820 PHF23Q9BUL5 403 aaPredicted RBP29.03■■■□□ 2.24
TRIP4-205ENST00000558820 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
TRIP4-205ENST00000558820 SPATA31E1Q6ZUB1 1445 aa29.01■■■□□ 2.23
TRIP4-205ENST00000558820 PRAG1Q86YV5 1406 aa29■■■□□ 2.23
TRIP4-205ENST00000558820 PTCH1Q13635 1447 aa28.99■■■□□ 2.23
TRIP4-205ENST00000558820 ADGRL3Q9HAR2 1447 aa28.99■■■□□ 2.23
TRIP4-205ENST00000558820 MST1RQ04912 1400 aa28.95■■■□□ 2.23
TRIP4-205ENST00000558820 JCADQ9P266 1359 aa28.94■■■□□ 2.22
TRIP4-205ENST00000558820 SHPRHQ149N8 1683 aa28.93■■■□□ 2.22
TRIP4-205ENST00000558820 RAB3GAP2Q9H2M9 1393 aa28.93■■■□□ 2.22
TRIP4-205ENST00000558820 NHSL1Q5SYE7 1610 aa28.93■■■□□ 2.22
TRIP4-205ENST00000558820 ASXL1Q8IXJ9 1541 aa28.93■■■□□ 2.22
TRIP4-205ENST00000558820 ANKRD30BQ9BXX2 1392 aa28.9■■■□□ 2.22
TRIP4-205ENST00000558820 ROBO2Q9HCK4 1378 aa28.9■■■□□ 2.22
TRIP4-205ENST00000558820 BRINP3Q76B58 766 aa28.9■■■□□ 2.22
TRIP4-205ENST00000558820 RGS17Q9UGC6 210 aaPredicted RBP28.89■■■□□ 2.22
TRIP4-205ENST00000558820 ADGRF5Q8IZF2 1346 aa28.89■■■□□ 2.21
TRIP4-205ENST00000558820 RGL3Q3MIN7 710 aa28.87■■■□□ 2.21
TRIP4-205ENST00000558820 KNDC1Q76NI1 1749 aa28.86■■■□□ 2.21
TRIP4-205ENST00000558820 PIK3C2GO75747 1445 aa28.84■■■□□ 2.21
TRIP4-205ENST00000558820 LAMC1P11047 1609 aa28.82■■■□□ 2.2
TRIP4-205ENST00000558820 LRP6O75581 1613 aa28.8■■■□□ 2.2
TRIP4-205ENST00000558820 C1orf167Q5SNV9 1468 aa28.8■■■□□ 2.2
TRIP4-205ENST00000558820 TECPR2O15040 1411 aa28.8■■■□□ 2.2
TRIP4-205ENST00000558820 SPATA31A6Q5VVP1 1343 aa28.8■■■□□ 2.2
TRIP4-205ENST00000558820 CDC42BPGQ6DT37 1551 aa28.79■■■□□ 2.2
TRIP4-205ENST00000558820 NRXN1Q9ULB1 1477 aa28.78■■■□□ 2.2
TRIP4-205ENST00000558820 MYOM2P54296 1465 aa28.78■■■□□ 2.2
TRIP4-205ENST00000558820 LRPPRCP42704 1394 aaKnown RBP28.76■■■□□ 2.2
TRIP4-205ENST00000558820 ABCC11Q96J66 1382 aa28.73■■■□□ 2.19
TRIP4-205ENST00000558820 HRCP23327 699 aa28.72■■■□□ 2.19
TRIP4-205ENST00000558820 POTEAQ6S8J7 498 aa28.71■■■□□ 2.19
TRIP4-205ENST00000558820 YTHDC2Q9H6S0 1430 aaKnown RBP28.69■■■□□ 2.18
TRIP4-205ENST00000558820 TMEM132EQ6IEE7 984 aa28.68■■■□□ 2.18
TRIP4-205ENST00000558820 DDX17Q92841 729 aaKnown RBP28.68■■■□□ 2.18
TRIP4-205ENST00000558820 STK26Q9P289 416 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms