RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 SLC26A8Q96RN1 970 aa22.95■■□□□ 1.26
RPL28-207ENST00000558815 ZFYVE9O95405 1425 aa22.94■■□□□ 1.26
RPL28-207ENST00000558815 NUTM2DQ5VT03 806 aaPredicted RBP22.94■■□□□ 1.26
RPL28-207ENST00000558815 SLC4A1APQ9BWU0 796 aaKnown RBP22.92■■□□□ 1.26
RPL28-207ENST00000558815 CLTCL1P53675 1640 aa22.92■■□□□ 1.26
RPL28-207ENST00000558815 HDGFP51858 240 aaKnown RBP22.91■■□□□ 1.26
RPL28-207ENST00000558815 LRRC7Q96NW7 1537 aa22.91■■□□□ 1.26
RPL28-207ENST00000558815 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
RPL28-207ENST00000558815 TRPM2O94759 1503 aa22.9■■□□□ 1.26
RPL28-207ENST00000558815 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.25
RPL28-207ENST00000558815 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.88■■□□□ 1.25
RPL28-207ENST00000558815 KIF1BO60333 1816 aa22.87■■□□□ 1.25
RPL28-207ENST00000558815 ZNF326Q5BKZ1 582 aaKnown RBP22.87■■□□□ 1.25
RPL28-207ENST00000558815 PIP4K2BP78356 416 aa22.86■■□□□ 1.25
RPL28-207ENST00000558815 TOM1O60784 492 aa22.85■■□□□ 1.25
RPL28-207ENST00000558815 FOXD1Q16676 465 aa22.84■■□□□ 1.25
RPL28-207ENST00000558815 XIRP1Q702N8 1843 aaKnown RBP22.84■■□□□ 1.25
RPL28-207ENST00000558815 SETD5Q9C0A6 1442 aa22.82■■□□□ 1.24
RPL28-207ENST00000558815 KCNA6P17658 529 aa22.82■■□□□ 1.24
RPL28-207ENST00000558815 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
RPL28-207ENST00000558815 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
RPL28-207ENST00000558815 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
RPL28-207ENST00000558815 PROSER2Q86WR7 435 aaPredicted RBP22.78■■□□□ 1.24
RPL28-207ENST00000558815 MPHOSPH9Q99550 1183 aa22.78■■□□□ 1.24
RPL28-207ENST00000558815 ALKQ9UM73 1620 aa22.78■■□□□ 1.24
RPL28-207ENST00000558815 ADAMTS13Q76LX8 1427 aa22.77■■□□□ 1.24
RPL28-207ENST00000558815 NEXMIFQ5QGS0 1516 aa22.77■■□□□ 1.24
RPL28-207ENST00000558815 TMEM94Q12767 1356 aa22.76■■□□□ 1.23
RPL28-207ENST00000558815 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
RPL28-207ENST00000558815 DIP2AQ14689 1571 aa22.76■■□□□ 1.23
RPL28-207ENST00000558815 NKTRP30414 1462 aaKnown RBP22.76■■□□□ 1.23
RPL28-207ENST00000558815 TBX22Q9Y458 520 aa22.75■■□□□ 1.23
RPL28-207ENST00000558815 NRXN3Q9Y4C0 1643 aa22.74■■□□□ 1.23
RPL28-207ENST00000558815 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
RPL28-207ENST00000558815 SETBP1Q9Y6X0 1596 aa22.71■■□□□ 1.23
RPL28-207ENST00000558815 HSPA1LP34931 641 aa22.69■■□□□ 1.22
RPL28-207ENST00000558815 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
RPL28-207ENST00000558815 PPLO60437 1756 aa22.68■■□□□ 1.22
RPL28-207ENST00000558815 PIK3R4Q99570 1358 aa22.66■■□□□ 1.22
RPL28-207ENST00000558815 C14orf37Q86TY3 774 aa22.66■■□□□ 1.22
RPL28-207ENST00000558815 PTPRUQ92729 1446 aa22.65■■□□□ 1.22
RPL28-207ENST00000558815 RGL3Q3MIN7 710 aa22.65■■□□□ 1.22
RPL28-207ENST00000558815 AMOTL2Q9Y2J4 779 aa22.65■■□□□ 1.22
RPL28-207ENST00000558815 MSH6P52701 1360 aa22.64■■□□□ 1.22
RPL28-207ENST00000558815 VGFO15240 615 aaPredicted RBP22.63■■□□□ 1.21
RPL28-207ENST00000558815 METP08581 1390 aa22.63■■□□□ 1.21
RPL28-207ENST00000558815 XRN1Q8IZH2 1706 aaKnown RBP22.62■■□□□ 1.21
RPL28-207ENST00000558815 RPGRIP1LQ68CZ1 1315 aa22.61■■□□□ 1.21
RPL28-207ENST00000558815 DISP3Q9P2K9 1392 aa22.6■■□□□ 1.21
RPL28-207ENST00000558815 SETD1AO15047 1707 aaKnown RBP22.59■■□□□ 1.21
RPL28-207ENST00000558815 IFT172Q9UG01 1749 aa22.59■■□□□ 1.21
RPL28-207ENST00000558815 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.21
RPL28-207ENST00000558815 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
RPL28-207ENST00000558815 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
RPL28-207ENST00000558815 NCOA3Q9Y6Q9 1424 aa22.54■■□□□ 1.2
RPL28-207ENST00000558815 ADGRF5Q8IZF2 1346 aa22.54■■□□□ 1.2
RPL28-207ENST00000558815 FAM135BQ49AJ0 1406 aa22.53■■□□□ 1.2
RPL28-207ENST00000558815 ATF3P18847 181 aa22.51■■□□□ 1.19
RPL28-207ENST00000558815 SLAIN2Q9P270 581 aa22.51■■□□□ 1.19
RPL28-207ENST00000558815 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
RPL28-207ENST00000558815 C19orf44Q9H6X5 657 aa22.5■■□□□ 1.19
RPL28-207ENST00000558815 HRCP23327 699 aa22.49■■□□□ 1.19
RPL28-207ENST00000558815 NALCNQ8IZF0 1738 aa22.48■■□□□ 1.19
RPL28-207ENST00000558815 MED1Q15648 1581 aaPredicted RBP22.48■■□□□ 1.19
RPL28-207ENST00000558815 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
RPL28-207ENST00000558815 PHLPP1O60346 1717 aa22.46■■□□□ 1.19
RPL28-207ENST00000558815 PTCH1Q13635 1447 aa22.44■■□□□ 1.18
RPL28-207ENST00000558815 ADGRL3Q9HAR2 1447 aa22.44■■□□□ 1.18
RPL28-207ENST00000558815 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
RPL28-207ENST00000558815 PIK3C2GO75747 1445 aa22.43■■□□□ 1.18
RPL28-207ENST00000558815 STK26Q9P289 416 aa22.43■■□□□ 1.18
RPL28-207ENST00000558815 DCCP43146 1447 aa22.42■■□□□ 1.18
RPL28-207ENST00000558815 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
RPL28-207ENST00000558815 TMEM132EQ6IEE7 984 aa22.41■■□□□ 1.18
RPL28-207ENST00000558815 MYOM2P54296 1465 aa22.41■■□□□ 1.18
RPL28-207ENST00000558815 MST1RQ04912 1400 aa22.38■■□□□ 1.17
RPL28-207ENST00000558815 LAMC1P11047 1609 aa22.38■■□□□ 1.17
RPL28-207ENST00000558815 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
RPL28-207ENST00000558815 PRAG1Q86YV5 1406 aa22.37■■□□□ 1.17
RPL28-207ENST00000558815 KNDC1Q76NI1 1749 aa22.37■■□□□ 1.17
RPL28-207ENST00000558815 NRXN1Q9ULB1 1477 aa22.36■■□□□ 1.17
RPL28-207ENST00000558815 CFAP70Q5T0N1 1121 aa22.36■■□□□ 1.17
RPL28-207ENST00000558815 ILDR2Q71H61 639 aa22.36■■□□□ 1.17
RPL28-207ENST00000558815 BRINP3Q76B58 766 aa22.36■■□□□ 1.17
RPL28-207ENST00000558815 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
RPL28-207ENST00000558815 LRPPRCP42704 1394 aaKnown RBP22.36■■□□□ 1.17
RPL28-207ENST00000558815 COL16A1Q07092 1604 aaPredicted RBP22.35■■□□□ 1.17
RPL28-207ENST00000558815 DCAF11Q8TEB1 546 aa22.34■■□□□ 1.17
RPL28-207ENST00000558815 AHDC1Q5TGY3 1603 aaPredicted RBP22.34■■□□□ 1.17
RPL28-207ENST00000558815 YTHDC2Q9H6S0 1430 aaKnown RBP22.33■■□□□ 1.17
RPL28-207ENST00000558815 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.17
RPL28-207ENST00000558815 WAPLQ7Z5K2 1190 aa22.32■■□□□ 1.16
RPL28-207ENST00000558815 TECPR2O15040 1411 aa22.31■■□□□ 1.16
RPL28-207ENST00000558815 ABCC11Q96J66 1382 aa22.3■■□□□ 1.16
RPL28-207ENST00000558815 PLEKHH1Q9ULM0 1364 aa22.3■■□□□ 1.16
RPL28-207ENST00000558815 DHX57Q6P158 1386 aaKnown RBP22.29■■□□□ 1.16
RPL28-207ENST00000558815 JCADQ9P266 1359 aa22.29■■□□□ 1.16
RPL28-207ENST00000558815 NHSL1Q5SYE7 1610 aa22.29■■□□□ 1.16
RPL28-207ENST00000558815 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
RPL28-207ENST00000558815 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms