RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
PBX1-213ENST00000558796 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
PBX1-213ENST00000558796 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
PBX1-213ENST00000558796 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
PBX1-213ENST00000558796 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
PBX1-213ENST00000558796 CHD2O14647 1828 aaKnown RBP16.45■□□□□ 0.22
PBX1-213ENST00000558796 PPLO60437 1756 aa16.43■□□□□ 0.22
PBX1-213ENST00000558796 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
PBX1-213ENST00000558796 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
PBX1-213ENST00000558796 FOXD1Q16676 465 aa16.43■□□□□ 0.22
PBX1-213ENST00000558796 NUTM2DQ5VT03 806 aaPredicted RBP16.43■□□□□ 0.22
PBX1-213ENST00000558796 NRXN3Q9Y4C0 1643 aa16.43■□□□□ 0.22
PBX1-213ENST00000558796 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
PBX1-213ENST00000558796 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
PBX1-213ENST00000558796 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
PBX1-213ENST00000558796 BCANQ96GW7 911 aa16.41■□□□□ 0.22
PBX1-213ENST00000558796 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
PBX1-213ENST00000558796 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
PBX1-213ENST00000558796 IFT172Q9UG01 1749 aa16.39■□□□□ 0.21
PBX1-213ENST00000558796 ZNF326Q5BKZ1 582 aaKnown RBP16.39■□□□□ 0.21
PBX1-213ENST00000558796 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
PBX1-213ENST00000558796 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
PBX1-213ENST00000558796 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
PBX1-213ENST00000558796 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
PBX1-213ENST00000558796 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
PBX1-213ENST00000558796 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
PBX1-213ENST00000558796 ALKQ9UM73 1620 aa16.36■□□□□ 0.21
PBX1-213ENST00000558796 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
PBX1-213ENST00000558796 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
PBX1-213ENST00000558796 UBAP1LF5GYI3 381 aa16.35■□□□□ 0.21
PBX1-213ENST00000558796 ACIN1Q9UKV3 1341 aaKnown RBP16.33■□□□□ 0.2
PBX1-213ENST00000558796 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.2
PBX1-213ENST00000558796 KCNA6P17658 529 aa16.31■□□□□ 0.2
PBX1-213ENST00000558796 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
PBX1-213ENST00000558796 TMEM94Q12767 1356 aa16.29■□□□□ 0.2
PBX1-213ENST00000558796 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
PBX1-213ENST00000558796 TBX22Q9Y458 520 aa16.29■□□□□ 0.2
PBX1-213ENST00000558796 RBM33Q96EV2 1170 aaKnown RBP16.28■□□□□ 0.2
PBX1-213ENST00000558796 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
PBX1-213ENST00000558796 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
PBX1-213ENST00000558796 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
PBX1-213ENST00000558796 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
PBX1-213ENST00000558796 TOM1O60784 492 aa16.26■□□□□ 0.19
PBX1-213ENST00000558796 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
PBX1-213ENST00000558796 RGL3Q3MIN7 710 aa16.25■□□□□ 0.19
PBX1-213ENST00000558796 METP08581 1390 aa16.25■□□□□ 0.19
PBX1-213ENST00000558796 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
PBX1-213ENST00000558796 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
PBX1-213ENST00000558796 HRCP23327 699 aa16.23■□□□□ 0.19
PBX1-213ENST00000558796 ROBO1Q9Y6N7 1651 aa16.23■□□□□ 0.19
PBX1-213ENST00000558796 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
PBX1-213ENST00000558796 ANKRD30BQ9BXX2 1392 aa16.22■□□□□ 0.19
PBX1-213ENST00000558796 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
PBX1-213ENST00000558796 MSH6P52701 1360 aa16.21■□□□□ 0.19
PBX1-213ENST00000558796 LAMC1P11047 1609 aa16.2■□□□□ 0.18
PBX1-213ENST00000558796 ADGRF5Q8IZF2 1346 aa16.19■□□□□ 0.18
PBX1-213ENST00000558796 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
PBX1-213ENST00000558796 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
PBX1-213ENST00000558796 MYOM2P54296 1465 aa16.18■□□□□ 0.18
PBX1-213ENST00000558796 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
PBX1-213ENST00000558796 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
PBX1-213ENST00000558796 HSPA1LP34931 641 aa16.16■□□□□ 0.18
PBX1-213ENST00000558796 NCOA3Q9Y6Q9 1424 aa16.16■□□□□ 0.18
PBX1-213ENST00000558796 PHLPP1O60346 1717 aa16.15■□□□□ 0.18
PBX1-213ENST00000558796 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
PBX1-213ENST00000558796 NRXN1Q9ULB1 1477 aa16.15■□□□□ 0.18
PBX1-213ENST00000558796 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
PBX1-213ENST00000558796 PRAG1Q86YV5 1406 aa16.12■□□□□ 0.17
PBX1-213ENST00000558796 ADGRL3Q9HAR2 1447 aa16.12■□□□□ 0.17
PBX1-213ENST00000558796 DCCP43146 1447 aa16.11■□□□□ 0.17
PBX1-213ENST00000558796 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
PBX1-213ENST00000558796 C19orf44Q9H6X5 657 aa16.09■□□□□ 0.17
PBX1-213ENST00000558796 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
PBX1-213ENST00000558796 ATF3P18847 181 aa16.08■□□□□ 0.16
PBX1-213ENST00000558796 TRIM26Q12899 539 aaPredicted RBP16.08■□□□□ 0.16
PBX1-213ENST00000558796 TMEM132EQ6IEE7 984 aa16.08■□□□□ 0.16
PBX1-213ENST00000558796 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
PBX1-213ENST00000558796 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
PBX1-213ENST00000558796 STK26Q9P289 416 aa16.07■□□□□ 0.16
PBX1-213ENST00000558796 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
PBX1-213ENST00000558796 TECPR2O15040 1411 aa16.07■□□□□ 0.16
PBX1-213ENST00000558796 YTHDC2Q9H6S0 1430 aaKnown RBP16.07■□□□□ 0.16
PBX1-213ENST00000558796 COL16A1Q07092 1604 aaPredicted RBP16.07■□□□□ 0.16
PBX1-213ENST00000558796 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
PBX1-213ENST00000558796 CDC42BPGQ6DT37 1551 aa16.06■□□□□ 0.16
PBX1-213ENST00000558796 MST1RQ04912 1400 aa16.06■□□□□ 0.16
PBX1-213ENST00000558796 LRPPRCP42704 1394 aaKnown RBP16.06■□□□□ 0.16
PBX1-213ENST00000558796 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
PBX1-213ENST00000558796 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
PBX1-213ENST00000558796 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
PBX1-213ENST00000558796 ADGRB1O14514 1584 aa16.05■□□□□ 0.16
PBX1-213ENST00000558796 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
PBX1-213ENST00000558796 KIAA1210Q9ULL0 1709 aa16.05■□□□□ 0.16
PBX1-213ENST00000558796 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
PBX1-213ENST00000558796 RGPD8O14715 1765 aaPredicted RBP16.04■□□□□ 0.16
PBX1-213ENST00000558796 ARHGEF28Q8N1W1 1705 aaKnown RBP16.04■□□□□ 0.16
PBX1-213ENST00000558796 FMN2Q9NZ56 1722 aa16.03■□□□□ 0.16
PBX1-213ENST00000558796 DISP3Q9P2K9 1392 aa16.02■□□□□ 0.16
PBX1-213ENST00000558796 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.16
PBX1-213ENST00000558796 ABCC11Q96J66 1382 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 326.9 ms