RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 NUTM2DQ5VT03 806 aaPredicted RBP17.57■□□□□ 0.4
SHF-204ENST00000558685 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
SHF-204ENST00000558685 MPHOSPH9Q99550 1183 aa17.57■□□□□ 0.4
SHF-204ENST00000558685 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
SHF-204ENST00000558685 CLTCL1P53675 1640 aa17.56■□□□□ 0.4
SHF-204ENST00000558685 CPS1P31327 1500 aa17.56■□□□□ 0.4
SHF-204ENST00000558685 RAB3GAP2Q9H2M9 1393 aa17.55■□□□□ 0.4
SHF-204ENST00000558685 PLEKHG1Q9ULL1 1385 aa17.54■□□□□ 0.4
SHF-204ENST00000558685 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
SHF-204ENST00000558685 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.4
SHF-204ENST00000558685 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.39
SHF-204ENST00000558685 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
SHF-204ENST00000558685 ADAMTS13Q76LX8 1427 aa17.5■□□□□ 0.39
SHF-204ENST00000558685 KCNA6P17658 529 aa17.49■□□□□ 0.39
SHF-204ENST00000558685 BCANQ96GW7 911 aa17.49■□□□□ 0.39
SHF-204ENST00000558685 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
SHF-204ENST00000558685 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
SHF-204ENST00000558685 TBX22Q9Y458 520 aa17.48■□□□□ 0.39
SHF-204ENST00000558685 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
SHF-204ENST00000558685 HRCP23327 699 aa17.46■□□□□ 0.39
SHF-204ENST00000558685 NEXMIFQ5QGS0 1516 aa17.46■□□□□ 0.39
SHF-204ENST00000558685 ALKQ9UM73 1620 aa17.45■□□□□ 0.38
SHF-204ENST00000558685 KIF1BO60333 1816 aa17.44■□□□□ 0.38
SHF-204ENST00000558685 NRXN3Q9Y4C0 1643 aa17.43■□□□□ 0.38
SHF-204ENST00000558685 RBM33Q96EV2 1170 aaKnown RBP17.43■□□□□ 0.38
SHF-204ENST00000558685 NWD1Q149M9 1564 aa17.43■□□□□ 0.38
SHF-204ENST00000558685 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
SHF-204ENST00000558685 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
SHF-204ENST00000558685 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
SHF-204ENST00000558685 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
SHF-204ENST00000558685 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
SHF-204ENST00000558685 PTPRUQ92729 1446 aa17.41■□□□□ 0.38
SHF-204ENST00000558685 CHD2O14647 1828 aaKnown RBP17.4■□□□□ 0.38
SHF-204ENST00000558685 PROSER2Q86WR7 435 aaPredicted RBP17.4■□□□□ 0.38
SHF-204ENST00000558685 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
SHF-204ENST00000558685 TOM1O60784 492 aa17.39■□□□□ 0.37
SHF-204ENST00000558685 DIP2AQ14689 1571 aa17.39■□□□□ 0.37
SHF-204ENST00000558685 METP08581 1390 aa17.39■□□□□ 0.37
SHF-204ENST00000558685 PIK3R4Q99570 1358 aa17.39■□□□□ 0.37
SHF-204ENST00000558685 NKTRP30414 1462 aaKnown RBP17.38■□□□□ 0.37
SHF-204ENST00000558685 RGL3Q3MIN7 710 aa17.38■□□□□ 0.37
SHF-204ENST00000558685 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
SHF-204ENST00000558685 VGFO15240 615 aaPredicted RBP17.37■□□□□ 0.37
SHF-204ENST00000558685 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
SHF-204ENST00000558685 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
SHF-204ENST00000558685 ADGRF5Q8IZF2 1346 aa17.35■□□□□ 0.37
SHF-204ENST00000558685 PPLO60437 1756 aa17.35■□□□□ 0.37
SHF-204ENST00000558685 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
SHF-204ENST00000558685 XRN1Q8IZH2 1706 aaKnown RBP17.31■□□□□ 0.36
SHF-204ENST00000558685 HSPA1LP34931 641 aa17.31■□□□□ 0.36
SHF-204ENST00000558685 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
SHF-204ENST00000558685 IFT172Q9UG01 1749 aa17.29■□□□□ 0.36
SHF-204ENST00000558685 NCOA3Q9Y6Q9 1424 aa17.29■□□□□ 0.36
SHF-204ENST00000558685 MSH6P52701 1360 aa17.27■□□□□ 0.35
SHF-204ENST00000558685 PIK3C2GO75747 1445 aa17.26■□□□□ 0.35
SHF-204ENST00000558685 FAM135BQ49AJ0 1406 aa17.25■□□□□ 0.35
SHF-204ENST00000558685 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
SHF-204ENST00000558685 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
SHF-204ENST00000558685 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
SHF-204ENST00000558685 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
SHF-204ENST00000558685 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
SHF-204ENST00000558685 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
SHF-204ENST00000558685 ASXL1Q8IXJ9 1541 aa17.22■□□□□ 0.35
SHF-204ENST00000558685 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
SHF-204ENST00000558685 C14orf93Q9H972 538 aaKnown RBP17.22■□□□□ 0.35
SHF-204ENST00000558685 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
SHF-204ENST00000558685 MYOM2P54296 1465 aa17.22■□□□□ 0.35
SHF-204ENST00000558685 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.21■□□□□ 0.35
SHF-204ENST00000558685 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
SHF-204ENST00000558685 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
SHF-204ENST00000558685 CFAP70Q5T0N1 1121 aa17.2■□□□□ 0.34
SHF-204ENST00000558685 ROBO1Q9Y6N7 1651 aa17.18■□□□□ 0.34
SHF-204ENST00000558685 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
SHF-204ENST00000558685 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
SHF-204ENST00000558685 ADGRL3Q9HAR2 1447 aa17.18■□□□□ 0.34
SHF-204ENST00000558685 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
SHF-204ENST00000558685 ATF3P18847 181 aa17.17■□□□□ 0.34
SHF-204ENST00000558685 DCCP43146 1447 aa17.17■□□□□ 0.34
SHF-204ENST00000558685 STK26Q9P289 416 aa17.17■□□□□ 0.34
SHF-204ENST00000558685 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
SHF-204ENST00000558685 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
SHF-204ENST00000558685 TECPR2O15040 1411 aa17.16■□□□□ 0.34
SHF-204ENST00000558685 NALCNQ8IZF0 1738 aa17.15■□□□□ 0.34
SHF-204ENST00000558685 MST1RQ04912 1400 aa17.14■□□□□ 0.33
SHF-204ENST00000558685 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
SHF-204ENST00000558685 WAPLQ7Z5K2 1190 aa17.14■□□□□ 0.33
SHF-204ENST00000558685 PLEKHH1Q9ULM0 1364 aa17.14■□□□□ 0.33
SHF-204ENST00000558685 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
SHF-204ENST00000558685 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
SHF-204ENST00000558685 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
SHF-204ENST00000558685 ADGRB1O14514 1584 aa17.11■□□□□ 0.33
SHF-204ENST00000558685 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
SHF-204ENST00000558685 LAMC1P11047 1609 aa17.09■□□□□ 0.33
SHF-204ENST00000558685 KNDC1Q76NI1 1749 aa17.09■□□□□ 0.33
SHF-204ENST00000558685 DISP3Q9P2K9 1392 aa17.08■□□□□ 0.32
SHF-204ENST00000558685 C1orf167Q5SNV9 1468 aa17.07■□□□□ 0.32
SHF-204ENST00000558685 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
SHF-204ENST00000558685 PHLPP1O60346 1717 aa17.05■□□□□ 0.32
SHF-204ENST00000558685 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
SHF-204ENST00000558685 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms