RNA–Protein interactions for RNA: ENST00000558631.1

APH1B-204, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-204ENST00000558631 ARHGAP23Q9P227 1491 aa13.13□□□□□ -0.31
APH1B-204ENST00000558631 LTKP29376 864 aa13.13□□□□□ -0.31
APH1B-204ENST00000558631 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
APH1B-204ENST00000558631 RGL3Q3MIN7 710 aa13.11□□□□□ -0.31
APH1B-204ENST00000558631 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
APH1B-204ENST00000558631 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
APH1B-204ENST00000558631 NEXMIFQ5QGS0 1516 aa13.09□□□□□ -0.31
APH1B-204ENST00000558631 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
APH1B-204ENST00000558631 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
APH1B-204ENST00000558631 PPLO60437 1756 aa13.09□□□□□ -0.31
APH1B-204ENST00000558631 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
APH1B-204ENST00000558631 HRCP23327 699 aa13.07□□□□□ -0.32
APH1B-204ENST00000558631 MED14O60244 1454 aa13.07□□□□□ -0.32
APH1B-204ENST00000558631 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
APH1B-204ENST00000558631 IFT172Q9UG01 1749 aa13.06□□□□□ -0.32
APH1B-204ENST00000558631 STRCP1A6NGW2 1772 aa13.06□□□□□ -0.32
APH1B-204ENST00000558631 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
APH1B-204ENST00000558631 NRXN3Q9Y4C0 1643 aa13.04□□□□□ -0.32
APH1B-204ENST00000558631 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
APH1B-204ENST00000558631 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
APH1B-204ENST00000558631 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
APH1B-204ENST00000558631 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
APH1B-204ENST00000558631 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.33
APH1B-204ENST00000558631 LTBP4Q8N2S1 1624 aa13.02□□□□□ -0.33
APH1B-204ENST00000558631 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
APH1B-204ENST00000558631 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
APH1B-204ENST00000558631 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
APH1B-204ENST00000558631 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
APH1B-204ENST00000558631 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
APH1B-204ENST00000558631 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
APH1B-204ENST00000558631 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
APH1B-204ENST00000558631 SETD1AO15047 1707 aaKnown RBP12.97□□□□□ -0.33
APH1B-204ENST00000558631 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
APH1B-204ENST00000558631 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
APH1B-204ENST00000558631 ALKQ9UM73 1620 aa12.97□□□□□ -0.33
APH1B-204ENST00000558631 CHD2O14647 1828 aaKnown RBP12.97□□□□□ -0.33
APH1B-204ENST00000558631 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.33
APH1B-204ENST00000558631 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.33
APH1B-204ENST00000558631 METP08581 1390 aa12.95□□□□□ -0.34
APH1B-204ENST00000558631 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
APH1B-204ENST00000558631 CPS1P31327 1500 aa12.95□□□□□ -0.34
APH1B-204ENST00000558631 PTPRUQ92729 1446 aa12.95□□□□□ -0.34
APH1B-204ENST00000558631 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
APH1B-204ENST00000558631 MYOM2P54296 1465 aa12.94□□□□□ -0.34
APH1B-204ENST00000558631 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
APH1B-204ENST00000558631 KCNA6P17658 529 aa12.93□□□□□ -0.34
APH1B-204ENST00000558631 STK26Q9P289 416 aa12.93□□□□□ -0.34
APH1B-204ENST00000558631 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
APH1B-204ENST00000558631 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
APH1B-204ENST00000558631 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
APH1B-204ENST00000558631 TMEM132EQ6IEE7 984 aa12.92□□□□□ -0.34
APH1B-204ENST00000558631 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
APH1B-204ENST00000558631 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
APH1B-204ENST00000558631 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
APH1B-204ENST00000558631 SCAF1Q9H7N4 1312 aaKnown RBP12.91□□□□□ -0.34
APH1B-204ENST00000558631 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
APH1B-204ENST00000558631 C14orf37Q86TY3 774 aa12.91□□□□□ -0.34
APH1B-204ENST00000558631 AMOTL2Q9Y2J4 779 aa12.91□□□□□ -0.34
APH1B-204ENST00000558631 LAMC1P11047 1609 aa12.91□□□□□ -0.34
APH1B-204ENST00000558631 TMEM94Q12767 1356 aa12.9□□□□□ -0.34
APH1B-204ENST00000558631 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
APH1B-204ENST00000558631 L3MBTL2Q969R5 705 aa12.89□□□□□ -0.35
APH1B-204ENST00000558631 TONSLQ96HA7 1378 aa12.89□□□□□ -0.35
APH1B-204ENST00000558631 NRXN1Q9ULB1 1477 aa12.89□□□□□ -0.35
APH1B-204ENST00000558631 UBAP1LF5GYI3 381 aa12.88□□□□□ -0.35
APH1B-204ENST00000558631 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
APH1B-204ENST00000558631 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
APH1B-204ENST00000558631 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
APH1B-204ENST00000558631 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
APH1B-204ENST00000558631 SAFB2Q14151 953 aaKnown RBP eCLIP12.85□□□□□ -0.35
APH1B-204ENST00000558631 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
APH1B-204ENST00000558631 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
APH1B-204ENST00000558631 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
APH1B-204ENST00000558631 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.84□□□□□ -0.35
APH1B-204ENST00000558631 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
APH1B-204ENST00000558631 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
APH1B-204ENST00000558631 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
APH1B-204ENST00000558631 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
APH1B-204ENST00000558631 TRPM1Q7Z4N2 1603 aa12.83□□□□□ -0.36
APH1B-204ENST00000558631 IQSEC2Q5JU85 1478 aa12.83□□□□□ -0.36
APH1B-204ENST00000558631 MSH6P52701 1360 aa12.82□□□□□ -0.36
APH1B-204ENST00000558631 PLEKHH1Q9ULM0 1364 aa12.82□□□□□ -0.36
APH1B-204ENST00000558631 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
APH1B-204ENST00000558631 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
APH1B-204ENST00000558631 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
APH1B-204ENST00000558631 PTCH1Q13635 1447 aa12.81□□□□□ -0.36
APH1B-204ENST00000558631 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
APH1B-204ENST00000558631 ARHGEF28Q8N1W1 1705 aaKnown RBP12.81□□□□□ -0.36
APH1B-204ENST00000558631 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
APH1B-204ENST00000558631 NBPF8Q3BBV2 869 aa12.79□□□□□ -0.36
APH1B-204ENST00000558631 PRAM1Q96QH2 718 aa12.79□□□□□ -0.36
APH1B-204ENST00000558631 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
APH1B-204ENST00000558631 ROBO1Q9Y6N7 1651 aa12.78□□□□□ -0.36
APH1B-204ENST00000558631 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
APH1B-204ENST00000558631 TOM1O60784 492 aa12.78□□□□□ -0.36
APH1B-204ENST00000558631 POGKQ9P215 609 aa12.78□□□□□ -0.36
APH1B-204ENST00000558631 ROCK2O75116 1388 aaKnown RBP12.78□□□□□ -0.36
APH1B-204ENST00000558631 ATF3P18847 181 aa12.77□□□□□ -0.37
APH1B-204ENST00000558631 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.37
APH1B-204ENST00000558631 TECPR2O15040 1411 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms