RNA–Protein interactions for RNA: ENST00000558554.5

IDH3A-207, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2 BASIC

Gene IDH3A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-207ENST00000558554 FOXD1Q16676 465 aa18.77■□□□□ 0.6
IDH3A-207ENST00000558554 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
IDH3A-207ENST00000558554 TRPM2O94759 1503 aa18.75■□□□□ 0.59
IDH3A-207ENST00000558554 RIMS2Q9UQ26 1411 aa18.75■□□□□ 0.59
IDH3A-207ENST00000558554 SLC26A8Q96RN1 970 aa18.73■□□□□ 0.59
IDH3A-207ENST00000558554 SETD5Q9C0A6 1442 aa18.73■□□□□ 0.59
IDH3A-207ENST00000558554 CPS1P31327 1500 aa18.71■□□□□ 0.59
IDH3A-207ENST00000558554 RAB3GAP2Q9H2M9 1393 aa18.71■□□□□ 0.59
IDH3A-207ENST00000558554 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
IDH3A-207ENST00000558554 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
IDH3A-207ENST00000558554 XIRP1Q702N8 1843 aaKnown RBP18.69■□□□□ 0.58
IDH3A-207ENST00000558554 UBAP1LF5GYI3 381 aa18.68■□□□□ 0.58
IDH3A-207ENST00000558554 MPHOSPH9Q99550 1183 aa18.67■□□□□ 0.58
IDH3A-207ENST00000558554 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
IDH3A-207ENST00000558554 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
IDH3A-207ENST00000558554 CHD2O14647 1828 aaKnown RBP18.65■□□□□ 0.58
IDH3A-207ENST00000558554 PIP4K2BP78356 416 aa18.64■□□□□ 0.57
IDH3A-207ENST00000558554 RBM33Q96EV2 1170 aaKnown RBP18.64■□□□□ 0.57
IDH3A-207ENST00000558554 PLEKHG1Q9ULL1 1385 aa18.63■□□□□ 0.57
IDH3A-207ENST00000558554 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
IDH3A-207ENST00000558554 NEXMIFQ5QGS0 1516 aa18.63■□□□□ 0.57
IDH3A-207ENST00000558554 LRRC7Q96NW7 1537 aa18.63■□□□□ 0.57
IDH3A-207ENST00000558554 PPLO60437 1756 aa18.63■□□□□ 0.57
IDH3A-207ENST00000558554 CCDC144AA2RUR9 1427 aa18.61■□□□□ 0.57
IDH3A-207ENST00000558554 NRXN3Q9Y4C0 1643 aa18.6■□□□□ 0.57
IDH3A-207ENST00000558554 DIP2AQ14689 1571 aa18.58■□□□□ 0.56
IDH3A-207ENST00000558554 NWD1Q149M9 1564 aa18.58■□□□□ 0.56
IDH3A-207ENST00000558554 RGL3Q3MIN7 710 aa18.58■□□□□ 0.56
IDH3A-207ENST00000558554 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
IDH3A-207ENST00000558554 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
IDH3A-207ENST00000558554 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
IDH3A-207ENST00000558554 TOM1O60784 492 aa18.54■□□□□ 0.56
IDH3A-207ENST00000558554 KCNA6P17658 529 aa18.54■□□□□ 0.56
IDH3A-207ENST00000558554 SETBP1Q9Y6X0 1596 aa18.53■□□□□ 0.56
IDH3A-207ENST00000558554 TMEM94Q12767 1356 aa18.53■□□□□ 0.56
IDH3A-207ENST00000558554 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
IDH3A-207ENST00000558554 NKTRP30414 1462 aaKnown RBP18.52■□□□□ 0.55
IDH3A-207ENST00000558554 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
IDH3A-207ENST00000558554 ALKQ9UM73 1620 aa18.51■□□□□ 0.55
IDH3A-207ENST00000558554 SETD1AO15047 1707 aaKnown RBP18.51■□□□□ 0.55
IDH3A-207ENST00000558554 TBX22Q9Y458 520 aa18.5■□□□□ 0.55
IDH3A-207ENST00000558554 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
IDH3A-207ENST00000558554 PTPRUQ92729 1446 aa18.48■□□□□ 0.55
IDH3A-207ENST00000558554 XRN1Q8IZH2 1706 aaKnown RBP18.48■□□□□ 0.55
IDH3A-207ENST00000558554 VGFO15240 615 aaPredicted RBP18.47■□□□□ 0.55
IDH3A-207ENST00000558554 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
IDH3A-207ENST00000558554 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.46■□□□□ 0.55
IDH3A-207ENST00000558554 METP08581 1390 aa18.46■□□□□ 0.55
IDH3A-207ENST00000558554 MSH6P52701 1360 aa18.45■□□□□ 0.54
IDH3A-207ENST00000558554 SPATA31E1Q6ZUB1 1445 aa18.45■□□□□ 0.54
IDH3A-207ENST00000558554 ROBO1Q9Y6N7 1651 aa18.44■□□□□ 0.54
IDH3A-207ENST00000558554 ADGRF5Q8IZF2 1346 aa18.44■□□□□ 0.54
IDH3A-207ENST00000558554 RPGRIP1LQ68CZ1 1315 aa18.43■□□□□ 0.54
IDH3A-207ENST00000558554 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
IDH3A-207ENST00000558554 HSPA1LP34931 641 aa18.42■□□□□ 0.54
IDH3A-207ENST00000558554 PIK3R4Q99570 1358 aa18.41■□□□□ 0.54
IDH3A-207ENST00000558554 ANKRD30BQ9BXX2 1392 aa18.4■□□□□ 0.54
IDH3A-207ENST00000558554 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
IDH3A-207ENST00000558554 STK26Q9P289 416 aa18.38■□□□□ 0.53
IDH3A-207ENST00000558554 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
IDH3A-207ENST00000558554 HRCP23327 699 aa18.36■□□□□ 0.53
IDH3A-207ENST00000558554 ATF3P18847 181 aa18.35■□□□□ 0.53
IDH3A-207ENST00000558554 TMEM132EQ6IEE7 984 aa18.35■□□□□ 0.53
IDH3A-207ENST00000558554 LAMC1P11047 1609 aa18.35■□□□□ 0.53
IDH3A-207ENST00000558554 PIK3C2GO75747 1445 aa18.34■□□□□ 0.53
IDH3A-207ENST00000558554 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
IDH3A-207ENST00000558554 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
IDH3A-207ENST00000558554 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
IDH3A-207ENST00000558554 KNDC1Q76NI1 1749 aa18.33■□□□□ 0.53
IDH3A-207ENST00000558554 MYOM2P54296 1465 aa18.32■□□□□ 0.52
IDH3A-207ENST00000558554 ROBO2Q9HCK4 1378 aa18.32■□□□□ 0.52
IDH3A-207ENST00000558554 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
IDH3A-207ENST00000558554 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
IDH3A-207ENST00000558554 CFAP70Q5T0N1 1121 aa18.3■□□□□ 0.52
IDH3A-207ENST00000558554 C19orf44Q9H6X5 657 aa18.3■□□□□ 0.52
IDH3A-207ENST00000558554 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
IDH3A-207ENST00000558554 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
IDH3A-207ENST00000558554 ADGRL3Q9HAR2 1447 aa18.28■□□□□ 0.52
IDH3A-207ENST00000558554 NCOA3Q9Y6Q9 1424 aa18.28■□□□□ 0.52
IDH3A-207ENST00000558554 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
IDH3A-207ENST00000558554 MED1Q15648 1581 aaPredicted RBP18.27■□□□□ 0.52
IDH3A-207ENST00000558554 WAPLQ7Z5K2 1190 aa18.26■□□□□ 0.51
IDH3A-207ENST00000558554 FAM135BQ49AJ0 1406 aa18.26■□□□□ 0.51
IDH3A-207ENST00000558554 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
IDH3A-207ENST00000558554 SAFB2Q14151 953 aaKnown RBP eCLIP18.25■□□□□ 0.51
IDH3A-207ENST00000558554 YTHDC2Q9H6S0 1430 aaKnown RBP18.25■□□□□ 0.51
IDH3A-207ENST00000558554 RGPD8O14715 1765 aaPredicted RBP18.25■□□□□ 0.51
IDH3A-207ENST00000558554 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
IDH3A-207ENST00000558554 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
IDH3A-207ENST00000558554 PLEKHH1Q9ULM0 1364 aa18.23■□□□□ 0.51
IDH3A-207ENST00000558554 LRPPRCP42704 1394 aaKnown RBP18.23■□□□□ 0.51
IDH3A-207ENST00000558554 DHX57Q6P158 1386 aaKnown RBP18.23■□□□□ 0.51
IDH3A-207ENST00000558554 DCCP43146 1447 aa18.22■□□□□ 0.51
IDH3A-207ENST00000558554 MST1RQ04912 1400 aa18.22■□□□□ 0.51
IDH3A-207ENST00000558554 C14orf93Q9H972 538 aaKnown RBP18.22■□□□□ 0.51
IDH3A-207ENST00000558554 COL16A1Q07092 1604 aaPredicted RBP18.22■□□□□ 0.51
IDH3A-207ENST00000558554 DDX17Q92841 729 aaKnown RBP18.2■□□□□ 0.5
IDH3A-207ENST00000558554 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
IDH3A-207ENST00000558554 NHSL1Q5SYE7 1610 aa18.2■□□□□ 0.5
IDH3A-207ENST00000558554 ARHGEF28Q8N1W1 1705 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms