RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 HDGFP51858 240 aaKnown RBP18.4■□□□□ 0.54
LRRC28-206ENST00000558471 ZNF326Q5BKZ1 582 aaKnown RBP18.4■□□□□ 0.54
LRRC28-206ENST00000558471 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
LRRC28-206ENST00000558471 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.53
LRRC28-206ENST00000558471 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.38■□□□□ 0.53
LRRC28-206ENST00000558471 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
LRRC28-206ENST00000558471 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
LRRC28-206ENST00000558471 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
LRRC28-206ENST00000558471 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
LRRC28-206ENST00000558471 BCANQ96GW7 911 aa18.34■□□□□ 0.53
LRRC28-206ENST00000558471 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
LRRC28-206ENST00000558471 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.53
LRRC28-206ENST00000558471 PLEKHG1Q9ULL1 1385 aa18.33■□□□□ 0.53
LRRC28-206ENST00000558471 RGL3Q3MIN7 710 aa18.33■□□□□ 0.52
LRRC28-206ENST00000558471 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.52
LRRC28-206ENST00000558471 PCGF6Q9BYE7 350 aa18.33■□□□□ 0.52
LRRC28-206ENST00000558471 LTBP4Q8N2S1 1624 aa18.33■□□□□ 0.52
LRRC28-206ENST00000558471 RPGRIP1LQ68CZ1 1315 aa18.31■□□□□ 0.52
LRRC28-206ENST00000558471 PPLO60437 1756 aa18.3■□□□□ 0.52
LRRC28-206ENST00000558471 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
LRRC28-206ENST00000558471 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
LRRC28-206ENST00000558471 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
LRRC28-206ENST00000558471 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
LRRC28-206ENST00000558471 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
LRRC28-206ENST00000558471 TBX22Q9Y458 520 aa18.27■□□□□ 0.52
LRRC28-206ENST00000558471 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
LRRC28-206ENST00000558471 NRXN3Q9Y4C0 1643 aa18.25■□□□□ 0.51
LRRC28-206ENST00000558471 SETBP1Q9Y6X0 1596 aa18.24■□□□□ 0.51
LRRC28-206ENST00000558471 KCNA6P17658 529 aa18.23■□□□□ 0.51
LRRC28-206ENST00000558471 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
LRRC28-206ENST00000558471 CHD2O14647 1828 aaKnown RBP18.22■□□□□ 0.51
LRRC28-206ENST00000558471 CPS1P31327 1500 aa18.22■□□□□ 0.51
LRRC28-206ENST00000558471 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
LRRC28-206ENST00000558471 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
LRRC28-206ENST00000558471 METP08581 1390 aa18.17■□□□□ 0.5
LRRC28-206ENST00000558471 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
LRRC28-206ENST00000558471 ALKQ9UM73 1620 aa18.17■□□□□ 0.5
LRRC28-206ENST00000558471 DCAF11Q8TEB1 546 aa18.17■□□□□ 0.5
LRRC28-206ENST00000558471 SETD1AO15047 1707 aaKnown RBP18.17■□□□□ 0.5
LRRC28-206ENST00000558471 LRRC7Q96NW7 1537 aa18.17■□□□□ 0.5
LRRC28-206ENST00000558471 NWD1Q149M9 1564 aa18.17■□□□□ 0.5
LRRC28-206ENST00000558471 PTPRUQ92729 1446 aa18.16■□□□□ 0.5
LRRC28-206ENST00000558471 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
LRRC28-206ENST00000558471 MYOM2P54296 1465 aa18.15■□□□□ 0.5
LRRC28-206ENST00000558471 IQSEC2Q5JU85 1478 aa18.15■□□□□ 0.5
LRRC28-206ENST00000558471 XIRP1Q702N8 1843 aaKnown RBP18.15■□□□□ 0.5
LRRC28-206ENST00000558471 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
LRRC28-206ENST00000558471 AMOTL2Q9Y2J4 779 aa18.15■□□□□ 0.5
LRRC28-206ENST00000558471 PROSER2Q86WR7 435 aaPredicted RBP18.14■□□□□ 0.49
LRRC28-206ENST00000558471 PIK3C2GO75747 1445 aa18.14■□□□□ 0.49
LRRC28-206ENST00000558471 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.49
LRRC28-206ENST00000558471 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
LRRC28-206ENST00000558471 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
LRRC28-206ENST00000558471 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
LRRC28-206ENST00000558471 C14orf93Q9H972 538 aaKnown RBP18.11■□□□□ 0.49
LRRC28-206ENST00000558471 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
LRRC28-206ENST00000558471 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
LRRC28-206ENST00000558471 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
LRRC28-206ENST00000558471 FBXO41Q8TF61 875 aa18.1■□□□□ 0.49
LRRC28-206ENST00000558471 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
LRRC28-206ENST00000558471 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
LRRC28-206ENST00000558471 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
LRRC28-206ENST00000558471 ILDR1Q86SU0 546 aaPredicted RBP18.06■□□□□ 0.48
LRRC28-206ENST00000558471 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
LRRC28-206ENST00000558471 LAMC1P11047 1609 aa18.05■□□□□ 0.48
LRRC28-206ENST00000558471 STK26Q9P289 416 aa18.04■□□□□ 0.48
LRRC28-206ENST00000558471 TOM1O60784 492 aa18.03■□□□□ 0.48
LRRC28-206ENST00000558471 LRPPRCP42704 1394 aaKnown RBP18.03■□□□□ 0.48
LRRC28-206ENST00000558471 NCOA3Q9Y6Q9 1424 aa18.02■□□□□ 0.48
LRRC28-206ENST00000558471 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.47
LRRC28-206ENST00000558471 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
LRRC28-206ENST00000558471 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
LRRC28-206ENST00000558471 ABCC11Q96J66 1382 aa18.01■□□□□ 0.47
LRRC28-206ENST00000558471 PTCH1Q13635 1447 aa18■□□□□ 0.47
LRRC28-206ENST00000558471 PRAG1Q86YV5 1406 aa18■□□□□ 0.47
LRRC28-206ENST00000558471 MSH6P52701 1360 aa18■□□□□ 0.47
LRRC28-206ENST00000558471 ADGRB1O14514 1584 aa18■□□□□ 0.47
LRRC28-206ENST00000558471 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
LRRC28-206ENST00000558471 C19orf44Q9H6X5 657 aa17.99■□□□□ 0.47
LRRC28-206ENST00000558471 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
LRRC28-206ENST00000558471 TECPR2O15040 1411 aa17.98■□□□□ 0.47
LRRC28-206ENST00000558471 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-206ENST00000558471 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
LRRC28-206ENST00000558471 PIP4K2BP78356 416 aa17.98■□□□□ 0.47
LRRC28-206ENST00000558471 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-206ENST00000558471 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
LRRC28-206ENST00000558471 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
LRRC28-206ENST00000558471 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
LRRC28-206ENST00000558471 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
LRRC28-206ENST00000558471 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
LRRC28-206ENST00000558471 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
LRRC28-206ENST00000558471 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
LRRC28-206ENST00000558471 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
LRRC28-206ENST00000558471 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
LRRC28-206ENST00000558471 ADGRL3Q9HAR2 1447 aa17.94■□□□□ 0.46
LRRC28-206ENST00000558471 FAM135BQ49AJ0 1406 aa17.93■□□□□ 0.46
LRRC28-206ENST00000558471 ATF3P18847 181 aa17.93■□□□□ 0.46
LRRC28-206ENST00000558471 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
LRRC28-206ENST00000558471 SLAIN2Q9P270 581 aa17.92■□□□□ 0.46
LRRC28-206ENST00000558471 DLC1Q96QB1 1528 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms