RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 CPS1P31327 1500 aa20.36■□□□□ 0.85
ALPK3-202ENST00000558077 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
ALPK3-202ENST00000558077 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
ALPK3-202ENST00000558077 CHGAP10645 457 aaKnown RBP20.34■□□□□ 0.85
ALPK3-202ENST00000558077 PLEKHG1Q9ULL1 1385 aa20.32■□□□□ 0.84
ALPK3-202ENST00000558077 FOXD1Q16676 465 aa20.3■□□□□ 0.84
ALPK3-202ENST00000558077 SLC26A8Q96RN1 970 aa20.3■□□□□ 0.84
ALPK3-202ENST00000558077 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
ALPK3-202ENST00000558077 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
ALPK3-202ENST00000558077 NUTM2DQ5VT03 806 aaPredicted RBP20.29■□□□□ 0.84
ALPK3-202ENST00000558077 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
ALPK3-202ENST00000558077 ADAMTS13Q76LX8 1427 aa20.27■□□□□ 0.84
ALPK3-202ENST00000558077 KIF1BO60333 1816 aa20.27■□□□□ 0.84
ALPK3-202ENST00000558077 HDGFP51858 240 aaKnown RBP20.27■□□□□ 0.84
ALPK3-202ENST00000558077 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
ALPK3-202ENST00000558077 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
ALPK3-202ENST00000558077 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
ALPK3-202ENST00000558077 ALKQ9UM73 1620 aa20.26■□□□□ 0.83
ALPK3-202ENST00000558077 KCNA6P17658 529 aa20.25■□□□□ 0.83
ALPK3-202ENST00000558077 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
ALPK3-202ENST00000558077 TBX22Q9Y458 520 aa20.24■□□□□ 0.83
ALPK3-202ENST00000558077 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
ALPK3-202ENST00000558077 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
ALPK3-202ENST00000558077 NWD1Q149M9 1564 aa20.23■□□□□ 0.83
ALPK3-202ENST00000558077 NRXN3Q9Y4C0 1643 aa20.23■□□□□ 0.83
ALPK3-202ENST00000558077 ACIN1Q9UKV3 1341 aaKnown RBP20.23■□□□□ 0.83
ALPK3-202ENST00000558077 UBAP1LF5GYI3 381 aa20.22■□□□□ 0.83
ALPK3-202ENST00000558077 HRCP23327 699 aa20.21■□□□□ 0.83
ALPK3-202ENST00000558077 BCANQ96GW7 911 aa20.2■□□□□ 0.82
ALPK3-202ENST00000558077 ZNF326Q5BKZ1 582 aaKnown RBP20.19■□□□□ 0.82
ALPK3-202ENST00000558077 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
ALPK3-202ENST00000558077 SETBP1Q9Y6X0 1596 aa20.18■□□□□ 0.82
ALPK3-202ENST00000558077 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
ALPK3-202ENST00000558077 PTPRUQ92729 1446 aa20.16■□□□□ 0.82
ALPK3-202ENST00000558077 NKTRP30414 1462 aaKnown RBP20.16■□□□□ 0.82
ALPK3-202ENST00000558077 PPLO60437 1756 aa20.16■□□□□ 0.82
ALPK3-202ENST00000558077 TMEM94Q12767 1356 aa20.15■□□□□ 0.82
ALPK3-202ENST00000558077 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
ALPK3-202ENST00000558077 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
ALPK3-202ENST00000558077 RPGRIP1LQ68CZ1 1315 aa20.14■□□□□ 0.81
ALPK3-202ENST00000558077 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.81
ALPK3-202ENST00000558077 TOM1O60784 492 aa20.13■□□□□ 0.81
ALPK3-202ENST00000558077 PROSER2Q86WR7 435 aaPredicted RBP20.13■□□□□ 0.81
ALPK3-202ENST00000558077 METP08581 1390 aa20.11■□□□□ 0.81
ALPK3-202ENST00000558077 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
ALPK3-202ENST00000558077 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
ALPK3-202ENST00000558077 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
ALPK3-202ENST00000558077 VGFO15240 615 aaPredicted RBP20.09■□□□□ 0.81
ALPK3-202ENST00000558077 XRN1Q8IZH2 1706 aaKnown RBP20.09■□□□□ 0.81
ALPK3-202ENST00000558077 PIP4K2BP78356 416 aa20.08■□□□□ 0.81
ALPK3-202ENST00000558077 AMOTL2Q9Y2J4 779 aa20.08■□□□□ 0.81
ALPK3-202ENST00000558077 RGL3Q3MIN7 710 aa20.07■□□□□ 0.8
ALPK3-202ENST00000558077 ADGRF5Q8IZF2 1346 aa20.06■□□□□ 0.8
ALPK3-202ENST00000558077 NCOA3Q9Y6Q9 1424 aa20.04■□□□□ 0.8
ALPK3-202ENST00000558077 HSPA1LP34931 641 aa20.03■□□□□ 0.8
ALPK3-202ENST00000558077 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.79
ALPK3-202ENST00000558077 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.99■□□□□ 0.79
ALPK3-202ENST00000558077 MSH6P52701 1360 aa19.98■□□□□ 0.79
ALPK3-202ENST00000558077 FAM135BQ49AJ0 1406 aa19.98■□□□□ 0.79
ALPK3-202ENST00000558077 PRAG1Q86YV5 1406 aa19.98■□□□□ 0.79
ALPK3-202ENST00000558077 NRXN1Q9ULB1 1477 aa19.98■□□□□ 0.79
ALPK3-202ENST00000558077 PIK3C2GO75747 1445 aa19.97■□□□□ 0.79
ALPK3-202ENST00000558077 ASXL1Q8IXJ9 1541 aa19.96■□□□□ 0.79
ALPK3-202ENST00000558077 C19orf44Q9H6X5 657 aa19.95■□□□□ 0.78
ALPK3-202ENST00000558077 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.78
ALPK3-202ENST00000558077 MYOM2P54296 1465 aa19.94■□□□□ 0.78
ALPK3-202ENST00000558077 SLAIN2Q9P270 581 aa19.94■□□□□ 0.78
ALPK3-202ENST00000558077 ROBO1Q9Y6N7 1651 aa19.93■□□□□ 0.78
ALPK3-202ENST00000558077 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
ALPK3-202ENST00000558077 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
ALPK3-202ENST00000558077 MED1Q15648 1581 aaPredicted RBP19.92■□□□□ 0.78
ALPK3-202ENST00000558077 C14orf93Q9H972 538 aaKnown RBP19.92■□□□□ 0.78
ALPK3-202ENST00000558077 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
ALPK3-202ENST00000558077 C14orf37Q86TY3 774 aa19.9■□□□□ 0.78
ALPK3-202ENST00000558077 ADGRL3Q9HAR2 1447 aa19.9■□□□□ 0.78
ALPK3-202ENST00000558077 DCCP43146 1447 aa19.89■□□□□ 0.77
ALPK3-202ENST00000558077 TMEM132EQ6IEE7 984 aa19.89■□□□□ 0.77
ALPK3-202ENST00000558077 CADPS2Q86UW7 1296 aa19.89■□□□□ 0.77
ALPK3-202ENST00000558077 TECPR2O15040 1411 aa19.88■□□□□ 0.77
ALPK3-202ENST00000558077 LRPPRCP42704 1394 aaKnown RBP19.88■□□□□ 0.77
ALPK3-202ENST00000558077 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
ALPK3-202ENST00000558077 ABCC11Q96J66 1382 aa19.87■□□□□ 0.77
ALPK3-202ENST00000558077 MST1RQ04912 1400 aa19.86■□□□□ 0.77
ALPK3-202ENST00000558077 KNDC1Q76NI1 1749 aa19.86■□□□□ 0.77
ALPK3-202ENST00000558077 ATF3P18847 181 aa19.86■□□□□ 0.77
ALPK3-202ENST00000558077 TRIM26Q12899 539 aaPredicted RBP19.86■□□□□ 0.77
ALPK3-202ENST00000558077 DCAF11Q8TEB1 546 aa19.85■□□□□ 0.77
ALPK3-202ENST00000558077 PHF23Q9BUL5 403 aaPredicted RBP19.85■□□□□ 0.77
ALPK3-202ENST00000558077 YTHDC2Q9H6S0 1430 aaKnown RBP19.85■□□□□ 0.77
ALPK3-202ENST00000558077 LAMC1P11047 1609 aa19.84■□□□□ 0.77
ALPK3-202ENST00000558077 STK26Q9P289 416 aa19.84■□□□□ 0.77
ALPK3-202ENST00000558077 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
ALPK3-202ENST00000558077 ADGRB1O14514 1584 aa19.83■□□□□ 0.76
ALPK3-202ENST00000558077 PLEKHH1Q9ULM0 1364 aa19.83■□□□□ 0.76
ALPK3-202ENST00000558077 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
ALPK3-202ENST00000558077 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
ALPK3-202ENST00000558077 BRINP3Q76B58 766 aa19.81■□□□□ 0.76
ALPK3-202ENST00000558077 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
ALPK3-202ENST00000558077 PHLPP1O60346 1717 aa19.79■□□□□ 0.76
ALPK3-202ENST00000558077 COL16A1Q07092 1604 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms