RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 SPHKAPQ2M3C7 1700 aa24.59■■□□□ 1.53
AC027088.1-201ENST00000557966 HFM1A2PYH4 1435 aa24.59■■□□□ 1.53
AC027088.1-201ENST00000557966 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
AC027088.1-201ENST00000557966 PLEKHG1Q9ULL1 1385 aa24.58■■□□□ 1.53
AC027088.1-201ENST00000557966 CHGAP10645 457 aaKnown RBP24.58■■□□□ 1.53
AC027088.1-201ENST00000557966 NWD1Q149M9 1564 aa24.58■■□□□ 1.52
AC027088.1-201ENST00000557966 SENP3Q9H4L4 574 aaPredicted RBP24.56■■□□□ 1.52
AC027088.1-201ENST00000557966 PPP1R15AO75807 674 aaPredicted RBP24.53■■□□□ 1.52
AC027088.1-201ENST00000557966 KCNA6P17658 529 aa24.53■■□□□ 1.52
AC027088.1-201ENST00000557966 HSPA1LP34931 641 aa24.52■■□□□ 1.52
AC027088.1-201ENST00000557966 NUTM2DQ5VT03 806 aaPredicted RBP24.51■■□□□ 1.51
AC027088.1-201ENST00000557966 BCANQ96GW7 911 aa24.51■■□□□ 1.51
AC027088.1-201ENST00000557966 TMEM94Q12767 1356 aa24.51■■□□□ 1.51
AC027088.1-201ENST00000557966 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
AC027088.1-201ENST00000557966 NKTRP30414 1462 aaKnown RBP24.51■■□□□ 1.51
AC027088.1-201ENST00000557966 TRPM2O94759 1503 aa24.51■■□□□ 1.51
AC027088.1-201ENST00000557966 CLTCL1P53675 1640 aa24.5■■□□□ 1.51
AC027088.1-201ENST00000557966 ADAMTS13Q76LX8 1427 aa24.5■■□□□ 1.51
AC027088.1-201ENST00000557966 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.49■■□□□ 1.51
AC027088.1-201ENST00000557966 HDGFP51858 240 aaKnown RBP24.48■■□□□ 1.51
AC027088.1-201ENST00000557966 RBM33Q96EV2 1170 aaKnown RBP24.46■■□□□ 1.51
AC027088.1-201ENST00000557966 CHD2O14647 1828 aaKnown RBP24.46■■□□□ 1.51
AC027088.1-201ENST00000557966 DIP2AQ14689 1571 aa24.46■■□□□ 1.51
AC027088.1-201ENST00000557966 TRIM52Q96A61 297 aa24.44■■□□□ 1.5
AC027088.1-201ENST00000557966 PROSER2Q86WR7 435 aaPredicted RBP24.43■■□□□ 1.5
AC027088.1-201ENST00000557966 TBX22Q9Y458 520 aa24.43■■□□□ 1.5
AC027088.1-201ENST00000557966 NRXN3Q9Y4C0 1643 aa24.43■■□□□ 1.5
AC027088.1-201ENST00000557966 NEXMIFQ5QGS0 1516 aa24.4■■□□□ 1.5
AC027088.1-201ENST00000557966 SETBP1Q9Y6X0 1596 aa24.39■■□□□ 1.5
AC027088.1-201ENST00000557966 ZNF326Q5BKZ1 582 aaKnown RBP24.37■■□□□ 1.49
AC027088.1-201ENST00000557966 ILDR2Q71H61 639 aa24.37■■□□□ 1.49
AC027088.1-201ENST00000557966 SLC4A1APQ9BWU0 796 aaKnown RBP24.37■■□□□ 1.49
AC027088.1-201ENST00000557966 PTPRUQ92729 1446 aa24.36■■□□□ 1.49
AC027088.1-201ENST00000557966 PIK3R4Q99570 1358 aa24.36■■□□□ 1.49
AC027088.1-201ENST00000557966 MED1Q15648 1581 aaPredicted RBP24.36■■□□□ 1.49
AC027088.1-201ENST00000557966 KIF1BO60333 1816 aa24.35■■□□□ 1.49
AC027088.1-201ENST00000557966 MSH6P52701 1360 aa24.33■■□□□ 1.49
AC027088.1-201ENST00000557966 FAM135BQ49AJ0 1406 aa24.33■■□□□ 1.49
AC027088.1-201ENST00000557966 ROBO1Q9Y6N7 1651 aa24.31■■□□□ 1.48
AC027088.1-201ENST00000557966 FOXD1Q16676 465 aa24.31■■□□□ 1.48
AC027088.1-201ENST00000557966 XRN1Q8IZH2 1706 aaKnown RBP24.31■■□□□ 1.48
AC027088.1-201ENST00000557966 NCOA3Q9Y6Q9 1424 aa24.28■■□□□ 1.48
AC027088.1-201ENST00000557966 AMOTL2Q9Y2J4 779 aa24.28■■□□□ 1.48
AC027088.1-201ENST00000557966 METP08581 1390 aa24.28■■□□□ 1.48
AC027088.1-201ENST00000557966 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.24■■□□□ 1.47
AC027088.1-201ENST00000557966 MPHOSPH9Q99550 1183 aa24.24■■□□□ 1.47
AC027088.1-201ENST00000557966 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
AC027088.1-201ENST00000557966 SETD1AO15047 1707 aaKnown RBP24.24■■□□□ 1.47
AC027088.1-201ENST00000557966 PPLO60437 1756 aa24.22■■□□□ 1.47
AC027088.1-201ENST00000557966 SLAIN2Q9P270 581 aa24.21■■□□□ 1.47
AC027088.1-201ENST00000557966 CCDC144AA2RUR9 1427 aa24.2■■□□□ 1.46
AC027088.1-201ENST00000557966 C14orf37Q86TY3 774 aa24.2■■□□□ 1.46
AC027088.1-201ENST00000557966 RPGRIP1LQ68CZ1 1315 aa24.18■■□□□ 1.46
AC027088.1-201ENST00000557966 SPATA31E1Q6ZUB1 1445 aa24.18■■□□□ 1.46
AC027088.1-201ENST00000557966 RAB3GAP2Q9H2M9 1393 aa24.17■■□□□ 1.46
AC027088.1-201ENST00000557966 C19orf44Q9H6X5 657 aa24.17■■□□□ 1.46
AC027088.1-201ENST00000557966 VGFO15240 615 aaPredicted RBP24.16■■□□□ 1.46
AC027088.1-201ENST00000557966 PHLPP1O60346 1717 aa24.15■■□□□ 1.46
AC027088.1-201ENST00000557966 DCCP43146 1447 aa24.14■■□□□ 1.45
AC027088.1-201ENST00000557966 CADPS2Q86UW7 1296 aa24.14■■□□□ 1.45
AC027088.1-201ENST00000557966 IFT172Q9UG01 1749 aa24.14■■□□□ 1.45
AC027088.1-201ENST00000557966 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
AC027088.1-201ENST00000557966 NALCNQ8IZF0 1738 aa24.13■■□□□ 1.45
AC027088.1-201ENST00000557966 ATF3P18847 181 aa24.12■■□□□ 1.45
AC027088.1-201ENST00000557966 PTCH1Q13635 1447 aa24.11■■□□□ 1.45
AC027088.1-201ENST00000557966 ADGRL3Q9HAR2 1447 aa24.11■■□□□ 1.45
AC027088.1-201ENST00000557966 PRAG1Q86YV5 1406 aa24.1■■□□□ 1.45
AC027088.1-201ENST00000557966 SOCS7O14512 581 aa24.1■■□□□ 1.45
AC027088.1-201ENST00000557966 AHDC1Q5TGY3 1603 aaPredicted RBP24.1■■□□□ 1.45
AC027088.1-201ENST00000557966 MST1RQ04912 1400 aa24.1■■□□□ 1.45
AC027088.1-201ENST00000557966 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
AC027088.1-201ENST00000557966 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
AC027088.1-201ENST00000557966 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
AC027088.1-201ENST00000557966 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
AC027088.1-201ENST00000557966 ROBO2Q9HCK4 1378 aa24.08■■□□□ 1.45
AC027088.1-201ENST00000557966 ASXL1Q8IXJ9 1541 aa24.05■■□□□ 1.44
AC027088.1-201ENST00000557966 BRINP3Q76B58 766 aa24.05■■□□□ 1.44
AC027088.1-201ENST00000557966 ANKRD30BQ9BXX2 1392 aa24.04■■□□□ 1.44
AC027088.1-201ENST00000557966 JCADQ9P266 1359 aa24.03■■□□□ 1.44
AC027088.1-201ENST00000557966 PIK3C2GO75747 1445 aa24.02■■□□□ 1.44
AC027088.1-201ENST00000557966 RGS17Q9UGC6 210 aaPredicted RBP24.02■■□□□ 1.44
AC027088.1-201ENST00000557966 NHSL1Q5SYE7 1610 aa24■■□□□ 1.43
AC027088.1-201ENST00000557966 TECPR2O15040 1411 aa23.97■■□□□ 1.43
AC027088.1-201ENST00000557966 MYOM2P54296 1465 aa23.97■■□□□ 1.43
AC027088.1-201ENST00000557966 NRXN1Q9ULB1 1477 aa23.97■■□□□ 1.43
AC027088.1-201ENST00000557966 SHPRHQ149N8 1683 aa23.96■■□□□ 1.43
AC027088.1-201ENST00000557966 LRP6O75581 1613 aa23.96■■□□□ 1.43
AC027088.1-201ENST00000557966 C1orf167Q5SNV9 1468 aa23.96■■□□□ 1.43
AC027088.1-201ENST00000557966 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
AC027088.1-201ENST00000557966 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
AC027088.1-201ENST00000557966 TMEM132EQ6IEE7 984 aa23.93■■□□□ 1.42
AC027088.1-201ENST00000557966 CDC42BPGQ6DT37 1551 aa23.92■■□□□ 1.42
AC027088.1-201ENST00000557966 HRCP23327 699 aa23.92■■□□□ 1.42
AC027088.1-201ENST00000557966 DDX17Q92841 729 aaKnown RBP23.92■■□□□ 1.42
AC027088.1-201ENST00000557966 STK26Q9P289 416 aa23.91■■□□□ 1.42
AC027088.1-201ENST00000557966 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
AC027088.1-201ENST00000557966 SPATA31A6Q5VVP1 1343 aa23.9■■□□□ 1.42
AC027088.1-201ENST00000557966 YTHDC2Q9H6S0 1430 aaKnown RBP23.9■■□□□ 1.42
AC027088.1-201ENST00000557966 PLEKHH1Q9ULM0 1364 aa23.9■■□□□ 1.42
AC027088.1-201ENST00000557966 LAMC1P11047 1609 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms