RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 TBX22Q9Y458 520 aa11.58□□□□□ -0.56
PSEN1-222ENST00000557356 RIMS2Q9UQ26 1411 aa11.58□□□□□ -0.56
PSEN1-222ENST00000557356 RPGRIP1LQ68CZ1 1315 aa11.58□□□□□ -0.56
PSEN1-222ENST00000557356 RAB3GAP2Q9H2M9 1393 aa11.57□□□□□ -0.56
PSEN1-222ENST00000557356 CPS1P31327 1500 aa11.57□□□□□ -0.56
PSEN1-222ENST00000557356 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-222ENST00000557356 NEURL4Q96JN8 1562 aa11.57□□□□□ -0.56
PSEN1-222ENST00000557356 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
PSEN1-222ENST00000557356 KCNA6P17658 529 aa11.56□□□□□ -0.56
PSEN1-222ENST00000557356 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
PSEN1-222ENST00000557356 TOM1O60784 492 aa11.55□□□□□ -0.56
PSEN1-222ENST00000557356 SLC26A8Q96RN1 970 aa11.55□□□□□ -0.56
PSEN1-222ENST00000557356 TMEM131LA2VDJ0 1609 aa11.55□□□□□ -0.56
PSEN1-222ENST00000557356 LTBP4Q8N2S1 1624 aa11.55□□□□□ -0.56
PSEN1-222ENST00000557356 TRPM2O94759 1503 aa11.55□□□□□ -0.56
PSEN1-222ENST00000557356 CCDC144AA2RUR9 1427 aa11.54□□□□□ -0.56
PSEN1-222ENST00000557356 ZFYVE9O95405 1425 aa11.54□□□□□ -0.56
PSEN1-222ENST00000557356 SPHKAPQ2M3C7 1700 aa11.53□□□□□ -0.56
PSEN1-222ENST00000557356 UBAP1LF5GYI3 381 aa11.52□□□□□ -0.57
PSEN1-222ENST00000557356 PIK3R4Q99570 1358 aa11.52□□□□□ -0.57
PSEN1-222ENST00000557356 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-222ENST00000557356 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
PSEN1-222ENST00000557356 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-222ENST00000557356 NUTM2DQ5VT03 806 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-222ENST00000557356 ANKRD30BQ9BXX2 1392 aa11.49□□□□□ -0.57
PSEN1-222ENST00000557356 RGL3Q3MIN7 710 aa11.48□□□□□ -0.57
PSEN1-222ENST00000557356 KIF1BO60333 1816 aa11.47□□□□□ -0.57
PSEN1-222ENST00000557356 CLTCL1P53675 1640 aa11.47□□□□□ -0.57
PSEN1-222ENST00000557356 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
PSEN1-222ENST00000557356 DIP2AQ14689 1571 aa11.46□□□□□ -0.57
PSEN1-222ENST00000557356 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
PSEN1-222ENST00000557356 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
PSEN1-222ENST00000557356 NKTRP30414 1462 aaKnown RBP11.45□□□□□ -0.58
PSEN1-222ENST00000557356 ADAMTS13Q76LX8 1427 aa11.45□□□□□ -0.58
PSEN1-222ENST00000557356 MYO5BQ9ULV0 1848 aa11.44□□□□□ -0.58
PSEN1-222ENST00000557356 C14orf37Q86TY3 774 aa11.44□□□□□ -0.58
PSEN1-222ENST00000557356 TMEM94Q12767 1356 aa11.43□□□□□ -0.58
PSEN1-222ENST00000557356 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
PSEN1-222ENST00000557356 C19orf44Q9H6X5 657 aa11.43□□□□□ -0.58
PSEN1-222ENST00000557356 SPATA31E1Q6ZUB1 1445 aa11.43□□□□□ -0.58
PSEN1-222ENST00000557356 MSH6P52701 1360 aa11.42□□□□□ -0.58
PSEN1-222ENST00000557356 SETBP1Q9Y6X0 1596 aa11.42□□□□□ -0.58
PSEN1-222ENST00000557356 NEXMIFQ5QGS0 1516 aa11.42□□□□□ -0.58
PSEN1-222ENST00000557356 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
PSEN1-222ENST00000557356 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
PSEN1-222ENST00000557356 ATF3P18847 181 aa11.4□□□□□ -0.58
PSEN1-222ENST00000557356 NWD1Q149M9 1564 aa11.4□□□□□ -0.58
PSEN1-222ENST00000557356 METP08581 1390 aa11.4□□□□□ -0.59
PSEN1-222ENST00000557356 ADGRF5Q8IZF2 1346 aa11.39□□□□□ -0.59
PSEN1-222ENST00000557356 SLAIN2Q9P270 581 aa11.39□□□□□ -0.59
PSEN1-222ENST00000557356 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
PSEN1-222ENST00000557356 ADRA2BP18089 450 aa11.38□□□□□ -0.59
PSEN1-222ENST00000557356 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
PSEN1-222ENST00000557356 C14orf93Q9H972 538 aaKnown RBP11.38□□□□□ -0.59
PSEN1-222ENST00000557356 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
PSEN1-222ENST00000557356 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
PSEN1-222ENST00000557356 DHX57Q6P158 1386 aaKnown RBP11.37□□□□□ -0.59
PSEN1-222ENST00000557356 FAM135BQ49AJ0 1406 aa11.36□□□□□ -0.59
PSEN1-222ENST00000557356 ALKQ9UM73 1620 aa11.36□□□□□ -0.59
PSEN1-222ENST00000557356 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
PSEN1-222ENST00000557356 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
PSEN1-222ENST00000557356 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
PSEN1-222ENST00000557356 MYOM2P54296 1465 aa11.35□□□□□ -0.59
PSEN1-222ENST00000557356 PPLO60437 1756 aa11.35□□□□□ -0.59
PSEN1-222ENST00000557356 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
PSEN1-222ENST00000557356 NRXN3Q9Y4C0 1643 aa11.34□□□□□ -0.59
PSEN1-222ENST00000557356 PIK3C2GO75747 1445 aa11.34□□□□□ -0.59
PSEN1-222ENST00000557356 DCCP43146 1447 aa11.34□□□□□ -0.59
PSEN1-222ENST00000557356 LRPPRCP42704 1394 aaKnown RBP11.33□□□□□ -0.6
PSEN1-222ENST00000557356 HSPA1LP34931 641 aa11.33□□□□□ -0.6
PSEN1-222ENST00000557356 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
PSEN1-222ENST00000557356 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
PSEN1-222ENST00000557356 PRAG1Q86YV5 1406 aa11.33□□□□□ -0.6
PSEN1-222ENST00000557356 TMEM132EQ6IEE7 984 aa11.32□□□□□ -0.6
PSEN1-222ENST00000557356 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-222ENST00000557356 STK26Q9P289 416 aa11.32□□□□□ -0.6
PSEN1-222ENST00000557356 NRXN1Q9ULB1 1477 aa11.32□□□□□ -0.6
PSEN1-222ENST00000557356 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
PSEN1-222ENST00000557356 ADGRL3Q9HAR2 1447 aa11.3□□□□□ -0.6
PSEN1-222ENST00000557356 ROBO2Q9HCK4 1378 aa11.29□□□□□ -0.6
PSEN1-222ENST00000557356 TECPR2O15040 1411 aa11.29□□□□□ -0.6
PSEN1-222ENST00000557356 YTHDC2Q9H6S0 1430 aaKnown RBP11.29□□□□□ -0.6
PSEN1-222ENST00000557356 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
PSEN1-222ENST00000557356 POGKQ9P215 609 aa11.29□□□□□ -0.6
PSEN1-222ENST00000557356 XIRP1Q702N8 1843 aaKnown RBP11.28□□□□□ -0.6
PSEN1-222ENST00000557356 LAMC1P11047 1609 aa11.28□□□□□ -0.6
PSEN1-222ENST00000557356 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
PSEN1-222ENST00000557356 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
PSEN1-222ENST00000557356 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
PSEN1-222ENST00000557356 WAPLQ7Z5K2 1190 aa11.26□□□□□ -0.61
PSEN1-222ENST00000557356 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
PSEN1-222ENST00000557356 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-222ENST00000557356 LRRC59Q96AG4 307 aaKnown RBP11.25□□□□□ -0.61
PSEN1-222ENST00000557356 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
PSEN1-222ENST00000557356 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
PSEN1-222ENST00000557356 SETD1AO15047 1707 aaKnown RBP11.25□□□□□ -0.61
PSEN1-222ENST00000557356 PCGF6Q9BYE7 350 aa11.24□□□□□ -0.61
PSEN1-222ENST00000557356 CLSPNQ9HAW4 1339 aa11.24□□□□□ -0.61
PSEN1-222ENST00000557356 MST1RQ04912 1400 aa11.24□□□□□ -0.61
PSEN1-222ENST00000557356 MSH5O43196 834 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms