RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
LGMN-215ENST00000557315 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
LGMN-215ENST00000557315 NEXMIFQ5QGS0 1516 aa21.46■■□□□ 1.03
LGMN-215ENST00000557315 NRXN3Q9Y4C0 1643 aa21.46■■□□□ 1.03
LGMN-215ENST00000557315 CHGAP10645 457 aaKnown RBP21.43■■□□□ 1.02
LGMN-215ENST00000557315 EID1Q9Y6B2 187 aa21.43■■□□□ 1.02
LGMN-215ENST00000557315 PLEKHG1Q9ULL1 1385 aa21.43■■□□□ 1.02
LGMN-215ENST00000557315 CPS1P31327 1500 aa21.43■■□□□ 1.02
LGMN-215ENST00000557315 XIRP1Q702N8 1843 aaKnown RBP21.43■■□□□ 1.02
LGMN-215ENST00000557315 ADAMTS13Q76LX8 1427 aa21.42■■□□□ 1.02
LGMN-215ENST00000557315 NWD1Q149M9 1564 aa21.4■■□□□ 1.02
LGMN-215ENST00000557315 NUTM2DQ5VT03 806 aaPredicted RBP21.4■■□□□ 1.02
LGMN-215ENST00000557315 PPLO60437 1756 aa21.4■■□□□ 1.02
LGMN-215ENST00000557315 DISP3Q9P2K9 1392 aa21.39■■□□□ 1.02
LGMN-215ENST00000557315 IFT172Q9UG01 1749 aa21.39■■□□□ 1.01
LGMN-215ENST00000557315 ALKQ9UM73 1620 aa21.39■■□□□ 1.01
LGMN-215ENST00000557315 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.01
LGMN-215ENST00000557315 SPATA31E1Q6ZUB1 1445 aa21.38■■□□□ 1.01
LGMN-215ENST00000557315 SETBP1Q9Y6X0 1596 aa21.38■■□□□ 1.01
LGMN-215ENST00000557315 CHD2O14647 1828 aaKnown RBP21.38■■□□□ 1.01
LGMN-215ENST00000557315 HRCP23327 699 aa21.37■■□□□ 1.01
LGMN-215ENST00000557315 SLC26A8Q96RN1 970 aa21.37■■□□□ 1.01
LGMN-215ENST00000557315 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
LGMN-215ENST00000557315 SETD1AO15047 1707 aaKnown RBP21.37■■□□□ 1.01
LGMN-215ENST00000557315 UBAP1LF5GYI3 381 aa21.35■■□□□ 1.01
LGMN-215ENST00000557315 DIP2AQ14689 1571 aa21.35■■□□□ 1.01
LGMN-215ENST00000557315 ACIN1Q9UKV3 1341 aaKnown RBP21.33■■□□□ 1.01
LGMN-215ENST00000557315 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
LGMN-215ENST00000557315 ANKRD30BQ9BXX2 1392 aa21.33■■□□□ 1
LGMN-215ENST00000557315 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.32■■□□□ 1
LGMN-215ENST00000557315 PTPRUQ92729 1446 aa21.3■■□□□ 1
LGMN-215ENST00000557315 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
LGMN-215ENST00000557315 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
LGMN-215ENST00000557315 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
LGMN-215ENST00000557315 TBX22Q9Y458 520 aa21.28■■□□□ 1
LGMN-215ENST00000557315 NKTRP30414 1462 aaKnown RBP21.27■■□□□ 1
LGMN-215ENST00000557315 KCNA6P17658 529 aa21.26■□□□□ 0.99
LGMN-215ENST00000557315 HDGFP51858 240 aaKnown RBP21.26■□□□□ 0.99
LGMN-215ENST00000557315 ILDR2Q71H61 639 aa21.25■□□□□ 0.99
LGMN-215ENST00000557315 METP08581 1390 aa21.23■□□□□ 0.99
LGMN-215ENST00000557315 RPGRIP1LQ68CZ1 1315 aa21.23■□□□□ 0.99
LGMN-215ENST00000557315 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
LGMN-215ENST00000557315 TOM1O60784 492 aa21.22■□□□□ 0.99
LGMN-215ENST00000557315 TMEM94Q12767 1356 aa21.22■□□□□ 0.99
LGMN-215ENST00000557315 ASXL1Q8IXJ9 1541 aa21.21■□□□□ 0.99
LGMN-215ENST00000557315 BCANQ96GW7 911 aa21.21■□□□□ 0.99
LGMN-215ENST00000557315 ADGRF5Q8IZF2 1346 aa21.21■□□□□ 0.99
LGMN-215ENST00000557315 RBM33Q96EV2 1170 aaKnown RBP21.2■□□□□ 0.98
LGMN-215ENST00000557315 NRXN1Q9ULB1 1477 aa21.2■□□□□ 0.98
LGMN-215ENST00000557315 SOCS7O14512 581 aa21.19■□□□□ 0.98
LGMN-215ENST00000557315 RGL3Q3MIN7 710 aa21.19■□□□□ 0.98
LGMN-215ENST00000557315 PIK3C2GO75747 1445 aa21.17■□□□□ 0.98
LGMN-215ENST00000557315 MYOM2P54296 1465 aa21.17■□□□□ 0.98
LGMN-215ENST00000557315 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
LGMN-215ENST00000557315 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
LGMN-215ENST00000557315 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
LGMN-215ENST00000557315 PRAG1Q86YV5 1406 aa21.14■□□□□ 0.98
LGMN-215ENST00000557315 PIP4K2BP78356 416 aa21.14■□□□□ 0.97
LGMN-215ENST00000557315 DHX57Q6P158 1386 aaKnown RBP21.13■□□□□ 0.97
LGMN-215ENST00000557315 PROSER2Q86WR7 435 aaPredicted RBP21.13■□□□□ 0.97
LGMN-215ENST00000557315 AMOTL2Q9Y2J4 779 aa21.13■□□□□ 0.97
LGMN-215ENST00000557315 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
LGMN-215ENST00000557315 HSPA1LP34931 641 aa21.11■□□□□ 0.97
LGMN-215ENST00000557315 NALCNQ8IZF0 1738 aa21.11■□□□□ 0.97
LGMN-215ENST00000557315 KNDC1Q76NI1 1749 aa21.09■□□□□ 0.97
LGMN-215ENST00000557315 NCOA3Q9Y6Q9 1424 aa21.08■□□□□ 0.97
LGMN-215ENST00000557315 PTCH1Q13635 1447 aa21.07■□□□□ 0.96
LGMN-215ENST00000557315 ROBO2Q9HCK4 1378 aa21.07■□□□□ 0.96
LGMN-215ENST00000557315 LAMC1P11047 1609 aa21.07■□□□□ 0.96
LGMN-215ENST00000557315 ADGRB1O14514 1584 aa21.05■□□□□ 0.96
LGMN-215ENST00000557315 TECPR2O15040 1411 aa21.04■□□□□ 0.96
LGMN-215ENST00000557315 ROBO1Q9Y6N7 1651 aa21.03■□□□□ 0.96
LGMN-215ENST00000557315 MED1Q15648 1581 aaPredicted RBP21.03■□□□□ 0.96
LGMN-215ENST00000557315 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
LGMN-215ENST00000557315 MSH6P52701 1360 aa21.01■□□□□ 0.95
LGMN-215ENST00000557315 ADGRL3Q9HAR2 1447 aa21.01■□□□□ 0.95
LGMN-215ENST00000557315 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
LGMN-215ENST00000557315 CFAP70Q5T0N1 1121 aa21■□□□□ 0.95
LGMN-215ENST00000557315 TMEM132EQ6IEE7 984 aa21■□□□□ 0.95
LGMN-215ENST00000557315 SIN3AQ96ST3 1273 aa20.99■□□□□ 0.95
LGMN-215ENST00000557315 DCCP43146 1447 aa20.98■□□□□ 0.95
LGMN-215ENST00000557315 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
LGMN-215ENST00000557315 YTHDC2Q9H6S0 1430 aaKnown RBP20.98■□□□□ 0.95
LGMN-215ENST00000557315 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
LGMN-215ENST00000557315 ABCC11Q96J66 1382 aa20.97■□□□□ 0.95
LGMN-215ENST00000557315 PLEKHH1Q9ULM0 1364 aa20.97■□□□□ 0.95
LGMN-215ENST00000557315 MST1RQ04912 1400 aa20.95■□□□□ 0.95
LGMN-215ENST00000557315 C19orf44Q9H6X5 657 aa20.95■□□□□ 0.94
LGMN-215ENST00000557315 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.94
LGMN-215ENST00000557315 KIAA1210Q9ULL0 1709 aa20.94■□□□□ 0.94
LGMN-215ENST00000557315 SLAIN2Q9P270 581 aa20.92■□□□□ 0.94
LGMN-215ENST00000557315 STK26Q9P289 416 aa20.92■□□□□ 0.94
LGMN-215ENST00000557315 DLC1Q96QB1 1528 aa20.92■□□□□ 0.94
LGMN-215ENST00000557315 CDC42BPGQ6DT37 1551 aa20.92■□□□□ 0.94
LGMN-215ENST00000557315 ARHGEF28Q8N1W1 1705 aaKnown RBP20.9■□□□□ 0.94
LGMN-215ENST00000557315 WAPLQ7Z5K2 1190 aa20.9■□□□□ 0.94
LGMN-215ENST00000557315 C14orf37Q86TY3 774 aa20.9■□□□□ 0.94
LGMN-215ENST00000557315 COL16A1Q07092 1604 aaPredicted RBP20.89■□□□□ 0.94
LGMN-215ENST00000557315 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
LGMN-215ENST00000557315 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms