RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 KDM5AP29375 1690 aaKnown RBP25.21■■□□□ 1.63
PSEN1-217ENST00000556533 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
PSEN1-217ENST00000556533 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.21■■□□□ 1.63
PSEN1-217ENST00000556533 TRPM2O94759 1503 aa25.21■■□□□ 1.63
PSEN1-217ENST00000556533 SLC26A8Q96RN1 970 aa25.19■■□□□ 1.62
PSEN1-217ENST00000556533 CLTCL1P53675 1640 aa25.17■■□□□ 1.62
PSEN1-217ENST00000556533 ZFYVE9O95405 1425 aa25.17■■□□□ 1.62
PSEN1-217ENST00000556533 IQGAP1P46940 1657 aa25.17■■□□□ 1.62
PSEN1-217ENST00000556533 CCDC144AA2RUR9 1427 aa25.14■■□□□ 1.62
PSEN1-217ENST00000556533 RGL3Q3MIN7 710 aa25.13■■□□□ 1.61
PSEN1-217ENST00000556533 MYO5BQ9ULV0 1848 aa25.13■■□□□ 1.61
PSEN1-217ENST00000556533 LTBP4Q8N2S1 1624 aa25.12■■□□□ 1.61
PSEN1-217ENST00000556533 PLEKHG1Q9ULL1 1385 aa25.11■■□□□ 1.61
PSEN1-217ENST00000556533 ILDR1Q86SU0 546 aaPredicted RBP25.06■■□□□ 1.6
PSEN1-217ENST00000556533 FBXO41Q8TF61 875 aa25.05■■□□□ 1.6
PSEN1-217ENST00000556533 RPGRIP1LQ68CZ1 1315 aa25.05■■□□□ 1.6
PSEN1-217ENST00000556533 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
PSEN1-217ENST00000556533 TBX22Q9Y458 520 aa25.04■■□□□ 1.6
PSEN1-217ENST00000556533 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
PSEN1-217ENST00000556533 KIF1BO60333 1816 aa25.02■■□□□ 1.6
PSEN1-217ENST00000556533 KCNA6P17658 529 aa25.02■■□□□ 1.6
PSEN1-217ENST00000556533 CPS1P31327 1500 aa25■■□□□ 1.59
PSEN1-217ENST00000556533 NEXMIFQ5QGS0 1516 aa24.98■■□□□ 1.59
PSEN1-217ENST00000556533 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
PSEN1-217ENST00000556533 ADAMTS13Q76LX8 1427 aa24.97■■□□□ 1.59
PSEN1-217ENST00000556533 PROSER2Q86WR7 435 aaPredicted RBP24.97■■□□□ 1.59
PSEN1-217ENST00000556533 RBM33Q96EV2 1170 aaKnown RBP24.96■■□□□ 1.59
PSEN1-217ENST00000556533 UBAP1LF5GYI3 381 aa24.95■■□□□ 1.58
PSEN1-217ENST00000556533 LRRC7Q96NW7 1537 aa24.92■■□□□ 1.58
PSEN1-217ENST00000556533 ADGRF5Q8IZF2 1346 aa24.92■■□□□ 1.58
PSEN1-217ENST00000556533 IQSEC2Q5JU85 1478 aa24.91■■□□□ 1.58
PSEN1-217ENST00000556533 STRCP1A6NGW2 1772 aa24.91■■□□□ 1.58
PSEN1-217ENST00000556533 AMOTL2Q9Y2J4 779 aa24.91■■□□□ 1.58
PSEN1-217ENST00000556533 PCGF6Q9BYE7 350 aa24.9■■□□□ 1.58
PSEN1-217ENST00000556533 METP08581 1390 aa24.89■■□□□ 1.57
PSEN1-217ENST00000556533 KDM2AQ9Y2K7 1162 aa24.88■■□□□ 1.57
PSEN1-217ENST00000556533 TMEM94Q12767 1356 aa24.88■■□□□ 1.57
PSEN1-217ENST00000556533 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
PSEN1-217ENST00000556533 PIK3R4Q99570 1358 aa24.87■■□□□ 1.57
PSEN1-217ENST00000556533 DIP2AQ14689 1571 aa24.87■■□□□ 1.57
PSEN1-217ENST00000556533 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
PSEN1-217ENST00000556533 TOM1O60784 492 aa24.86■■□□□ 1.57
PSEN1-217ENST00000556533 DCAF11Q8TEB1 546 aa24.86■■□□□ 1.57
PSEN1-217ENST00000556533 PIP4K2BP78356 416 aa24.85■■□□□ 1.57
PSEN1-217ENST00000556533 C14orf37Q86TY3 774 aa24.85■■□□□ 1.57
PSEN1-217ENST00000556533 PTPRUQ92729 1446 aa24.85■■□□□ 1.57
PSEN1-217ENST00000556533 NRXN3Q9Y4C0 1643 aa24.84■■□□□ 1.57
PSEN1-217ENST00000556533 PPLO60437 1756 aa24.83■■□□□ 1.57
PSEN1-217ENST00000556533 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
PSEN1-217ENST00000556533 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
PSEN1-217ENST00000556533 SIN3AQ96ST3 1273 aa24.82■■□□□ 1.56
PSEN1-217ENST00000556533 NKTRP30414 1462 aaKnown RBP24.82■■□□□ 1.56
PSEN1-217ENST00000556533 NWD1Q149M9 1564 aa24.8■■□□□ 1.56
PSEN1-217ENST00000556533 ALKQ9UM73 1620 aa24.79■■□□□ 1.56
PSEN1-217ENST00000556533 CHD2O14647 1828 aaKnown RBP24.78■■□□□ 1.56
PSEN1-217ENST00000556533 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
PSEN1-217ENST00000556533 STK26Q9P289 416 aa24.78■■□□□ 1.56
PSEN1-217ENST00000556533 CFAP70Q5T0N1 1121 aa24.77■■□□□ 1.56
PSEN1-217ENST00000556533 C14orf93Q9H972 538 aaKnown RBP24.75■■□□□ 1.55
PSEN1-217ENST00000556533 PIK3C2GO75747 1445 aa24.75■■□□□ 1.55
PSEN1-217ENST00000556533 MSH6P52701 1360 aa24.74■■□□□ 1.55
PSEN1-217ENST00000556533 IFT172Q9UG01 1749 aa24.73■■□□□ 1.55
PSEN1-217ENST00000556533 MYOM2P54296 1465 aa24.73■■□□□ 1.55
PSEN1-217ENST00000556533 STAC3Q96MF2 364 aa24.72■■□□□ 1.55
PSEN1-217ENST00000556533 C19orf44Q9H6X5 657 aa24.7■■□□□ 1.54
PSEN1-217ENST00000556533 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.54
PSEN1-217ENST00000556533 ATF3P18847 181 aa24.69■■□□□ 1.54
PSEN1-217ENST00000556533 ROBO2Q9HCK4 1378 aa24.68■■□□□ 1.54
PSEN1-217ENST00000556533 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
PSEN1-217ENST00000556533 NCOA3Q9Y6Q9 1424 aa24.68■■□□□ 1.54
PSEN1-217ENST00000556533 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
PSEN1-217ENST00000556533 XRN1Q8IZH2 1706 aaKnown RBP24.67■■□□□ 1.54
PSEN1-217ENST00000556533 SLAIN2Q9P270 581 aa24.66■■□□□ 1.54
PSEN1-217ENST00000556533 LRPPRCP42704 1394 aaKnown RBP24.66■■□□□ 1.54
PSEN1-217ENST00000556533 SETD1AO15047 1707 aaKnown RBP24.65■■□□□ 1.54
PSEN1-217ENST00000556533 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.54
PSEN1-217ENST00000556533 CADPS2Q86UW7 1296 aa24.63■■□□□ 1.53
PSEN1-217ENST00000556533 YTHDC2Q9H6S0 1430 aaKnown RBP24.62■■□□□ 1.53
PSEN1-217ENST00000556533 HSPA1LP34931 641 aa24.62■■□□□ 1.53
PSEN1-217ENST00000556533 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
PSEN1-217ENST00000556533 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
PSEN1-217ENST00000556533 ASXL1Q8IXJ9 1541 aa24.6■■□□□ 1.53
PSEN1-217ENST00000556533 TRAK1Q9UPV9 953 aa24.59■■□□□ 1.53
PSEN1-217ENST00000556533 SAFB2Q14151 953 aaKnown RBP eCLIP24.57■■□□□ 1.52
PSEN1-217ENST00000556533 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
PSEN1-217ENST00000556533 PLEKHH1Q9ULM0 1364 aa24.56■■□□□ 1.52
PSEN1-217ENST00000556533 POGKQ9P215 609 aa24.56■■□□□ 1.52
PSEN1-217ENST00000556533 PRAM1Q96QH2 718 aa24.55■■□□□ 1.52
PSEN1-217ENST00000556533 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
PSEN1-217ENST00000556533 LAMC1P11047 1609 aa24.54■■□□□ 1.52
PSEN1-217ENST00000556533 TECPR2O15040 1411 aa24.54■■□□□ 1.52
PSEN1-217ENST00000556533 FAM135BQ49AJ0 1406 aa24.54■■□□□ 1.52
PSEN1-217ENST00000556533 PRAG1Q86YV5 1406 aa24.54■■□□□ 1.52
PSEN1-217ENST00000556533 NBPF1Q3BBV0 1214 aa24.54■■□□□ 1.52
PSEN1-217ENST00000556533 SIRT1Q96EB6 747 aa24.54■■□□□ 1.52
PSEN1-217ENST00000556533 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.54■■□□□ 1.52
PSEN1-217ENST00000556533 DCCP43146 1447 aa24.51■■□□□ 1.51
PSEN1-217ENST00000556533 CCER1Q8TC90 406 aaPredicted RBP24.5■■□□□ 1.51
PSEN1-217ENST00000556533 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
PSEN1-217ENST00000556533 NUTM2FA1L443 756 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms