RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 PPP1R15AO75807 674 aaPredicted RBP28.94■■■□□ 2.22
PNN-205ENST00000556530 HDGFP51858 240 aaKnown RBP28.94■■■□□ 2.22
PNN-205ENST00000556530 SCAF11Q99590 1463 aaKnown RBP28.93■■■□□ 2.22
PNN-205ENST00000556530 RGL3Q3MIN7 710 aa28.93■■■□□ 2.22
PNN-205ENST00000556530 DHX57Q6P158 1386 aaKnown RBP28.92■■■□□ 2.22
PNN-205ENST00000556530 BCANQ96GW7 911 aa28.92■■■□□ 2.22
PNN-205ENST00000556530 NPHP4O75161 1426 aaPredicted RBP28.9■■■□□ 2.22
PNN-205ENST00000556530 NEURL4Q96JN8 1562 aa28.9■■■□□ 2.22
PNN-205ENST00000556530 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.89■■■□□ 2.22
PNN-205ENST00000556530 ZFYVE9O95405 1425 aa28.87■■■□□ 2.21
PNN-205ENST00000556530 IQGAP1P46940 1657 aa28.84■■■□□ 2.21
PNN-205ENST00000556530 MED14O60244 1454 aa28.84■■■□□ 2.21
PNN-205ENST00000556530 SPATA31E1Q6ZUB1 1445 aa28.82■■■□□ 2.2
PNN-205ENST00000556530 RPGRIP1LQ68CZ1 1315 aa28.81■■■□□ 2.2
PNN-205ENST00000556530 NEXMIFQ5QGS0 1516 aa28.8■■■□□ 2.2
PNN-205ENST00000556530 SLC26A8Q96RN1 970 aa28.79■■■□□ 2.2
PNN-205ENST00000556530 SIN3AQ96ST3 1273 aa28.79■■■□□ 2.2
PNN-205ENST00000556530 NEUROD1Q13562 356 aa28.78■■■□□ 2.2
PNN-205ENST00000556530 PLEKHG1Q9ULL1 1385 aa28.77■■■□□ 2.2
PNN-205ENST00000556530 VGFO15240 615 aaPredicted RBP28.76■■■□□ 2.19
PNN-205ENST00000556530 PPLO60437 1756 aa28.75■■■□□ 2.19
PNN-205ENST00000556530 ZNF335Q9H4Z2 1342 aaPredicted RBP28.72■■■□□ 2.19
PNN-205ENST00000556530 KDM2AQ9Y2K7 1162 aa28.71■■■□□ 2.19
PNN-205ENST00000556530 DCAF11Q8TEB1 546 aa28.69■■■□□ 2.18
PNN-205ENST00000556530 ADGRF5Q8IZF2 1346 aa28.69■■■□□ 2.18
PNN-205ENST00000556530 IFT172Q9UG01 1749 aa28.68■■■□□ 2.18
PNN-205ENST00000556530 CCER1Q8TC90 406 aaPredicted RBP28.65■■■□□ 2.18
PNN-205ENST00000556530 TBX22Q9Y458 520 aa28.65■■■□□ 2.18
PNN-205ENST00000556530 ADAMTS13Q76LX8 1427 aa28.64■■■□□ 2.18
PNN-205ENST00000556530 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
PNN-205ENST00000556530 SETBP1Q9Y6X0 1596 aa28.61■■■□□ 2.17
PNN-205ENST00000556530 DIP2AQ14689 1571 aa28.58■■■□□ 2.17
PNN-205ENST00000556530 L3MBTL2Q969R5 705 aa28.57■■■□□ 2.16
PNN-205ENST00000556530 MYOM2P54296 1465 aa28.57■■■□□ 2.16
PNN-205ENST00000556530 STRCP1A6NGW2 1772 aa28.56■■■□□ 2.16
PNN-205ENST00000556530 KCNA6P17658 529 aa28.56■■■□□ 2.16
PNN-205ENST00000556530 LTBP4Q8N2S1 1624 aa28.56■■■□□ 2.16
PNN-205ENST00000556530 ALKQ9UM73 1620 aa28.55■■■□□ 2.16
PNN-205ENST00000556530 METP08581 1390 aa28.53■■■□□ 2.16
PNN-205ENST00000556530 PIK3C2GO75747 1445 aa28.52■■■□□ 2.16
PNN-205ENST00000556530 CERKQ8TCT0 537 aa28.52■■■□□ 2.16
PNN-205ENST00000556530 STAC3Q96MF2 364 aa28.52■■■□□ 2.16
PNN-205ENST00000556530 CHD2O14647 1828 aaKnown RBP28.52■■■□□ 2.16
PNN-205ENST00000556530 TONSLQ96HA7 1378 aa28.51■■■□□ 2.16
PNN-205ENST00000556530 CFAP70Q5T0N1 1121 aa28.51■■■□□ 2.15
PNN-205ENST00000556530 AMOTL2Q9Y2J4 779 aa28.51■■■□□ 2.15
PNN-205ENST00000556530 NRXN1Q9ULB1 1477 aa28.5■■■□□ 2.15
PNN-205ENST00000556530 CPS1P31327 1500 aa28.49■■■□□ 2.15
PNN-205ENST00000556530 PIK3R4Q99570 1358 aa28.49■■■□□ 2.15
PNN-205ENST00000556530 TMEM132EQ6IEE7 984 aa28.48■■■□□ 2.15
PNN-205ENST00000556530 PROSER2Q86WR7 435 aaPredicted RBP28.48■■■□□ 2.15
PNN-205ENST00000556530 C14orf93Q9H972 538 aaKnown RBP28.48■■■□□ 2.15
PNN-205ENST00000556530 PTPRUQ92729 1446 aa28.48■■■□□ 2.15
PNN-205ENST00000556530 CLSPNQ9HAW4 1339 aa28.47■■■□□ 2.15
PNN-205ENST00000556530 SETD1AO15047 1707 aaKnown RBP28.47■■■□□ 2.15
PNN-205ENST00000556530 RBM33Q96EV2 1170 aaKnown RBP28.46■■■□□ 2.15
PNN-205ENST00000556530 NWD1Q149M9 1564 aa28.45■■■□□ 2.14
PNN-205ENST00000556530 STK26Q9P289 416 aa28.44■■■□□ 2.14
PNN-205ENST00000556530 LRRC7Q96NW7 1537 aa28.43■■■□□ 2.14
PNN-205ENST00000556530 LAMC1P11047 1609 aa28.4■■■□□ 2.14
PNN-205ENST00000556530 PRAG1Q86YV5 1406 aa28.4■■■□□ 2.14
PNN-205ENST00000556530 NKTRP30414 1462 aaKnown RBP28.4■■■□□ 2.14
PNN-205ENST00000556530 TMEM94Q12767 1356 aa28.38■■■□□ 2.13
PNN-205ENST00000556530 XRN1Q8IZH2 1706 aaKnown RBP28.37■■■□□ 2.13
PNN-205ENST00000556530 ASXL1Q8IXJ9 1541 aa28.37■■■□□ 2.13
PNN-205ENST00000556530 C14orf37Q86TY3 774 aa28.36■■■□□ 2.13
PNN-205ENST00000556530 LRPPRCP42704 1394 aaKnown RBP28.34■■■□□ 2.13
PNN-205ENST00000556530 YTHDC2Q9H6S0 1430 aaKnown RBP28.34■■■□□ 2.13
PNN-205ENST00000556530 XIRP1Q702N8 1843 aaKnown RBP28.33■■■□□ 2.13
PNN-205ENST00000556530 NBPF1Q3BBV0 1214 aa28.32■■■□□ 2.12
PNN-205ENST00000556530 NBPF8Q3BBV2 869 aa28.32■■■□□ 2.12
PNN-205ENST00000556530 ROBO2Q9HCK4 1378 aa28.31■■■□□ 2.12
PNN-205ENST00000556530 IQSEC2Q5JU85 1478 aa28.29■■■□□ 2.12
PNN-205ENST00000556530 TRAK1Q9UPV9 953 aa28.29■■■□□ 2.12
PNN-205ENST00000556530 KIAA1210Q9ULL0 1709 aa28.29■■■□□ 2.12
PNN-205ENST00000556530 ADGRB1O14514 1584 aa28.28■■■□□ 2.12
PNN-205ENST00000556530 ABCC11Q96J66 1382 aa28.28■■■□□ 2.12
PNN-205ENST00000556530 UBAP1LF5GYI3 381 aa28.27■■■□□ 2.12
PNN-205ENST00000556530 WAPLQ7Z5K2 1190 aa28.27■■■□□ 2.12
PNN-205ENST00000556530 TIMELESSQ9UNS1 1208 aa28.27■■■□□ 2.12
PNN-205ENST00000556530 PTCH1Q13635 1447 aa28.26■■■□□ 2.11
PNN-205ENST00000556530 MSH6P52701 1360 aa28.24■■■□□ 2.11
PNN-205ENST00000556530 KNDC1Q76NI1 1749 aa28.24■■■□□ 2.11
PNN-205ENST00000556530 TRPM1Q7Z4N2 1603 aa28.24■■■□□ 2.11
PNN-205ENST00000556530 TECPR2O15040 1411 aa28.23■■■□□ 2.11
PNN-205ENST00000556530 TOM1O60784 492 aa28.22■■■□□ 2.11
PNN-205ENST00000556530 SAFB2Q14151 953 aaKnown RBP eCLIP28.22■■■□□ 2.11
PNN-205ENST00000556530 POGKQ9P215 609 aa28.22■■■□□ 2.11
PNN-205ENST00000556530 ROCK2O75116 1388 aaKnown RBP28.22■■■□□ 2.11
PNN-205ENST00000556530 PLEKHH1Q9ULM0 1364 aa28.22■■■□□ 2.11
PNN-205ENST00000556530 NCOA3Q9Y6Q9 1424 aa28.21■■■□□ 2.11
PNN-205ENST00000556530 PRAM1Q96QH2 718 aa28.21■■■□□ 2.11
PNN-205ENST00000556530 C19orf44Q9H6X5 657 aa28.2■■■□□ 2.1
PNN-205ENST00000556530 SCAF1Q9H7N4 1312 aaKnown RBP28.19■■■□□ 2.1
PNN-205ENST00000556530 SIRT1Q96EB6 747 aa28.19■■■□□ 2.1
PNN-205ENST00000556530 ATF3P18847 181 aa28.18■■■□□ 2.1
PNN-205ENST00000556530 PIP4K2BP78356 416 aa28.18■■■□□ 2.1
PNN-205ENST00000556530 FBXO41Q8TF61 875 aa28.17■■■□□ 2.1
PNN-205ENST00000556530 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.16■■■□□ 2.1
PNN-205ENST00000556530 DLC1Q96QB1 1528 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms