RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 NUTM2DQ5VT03 806 aaPredicted RBP24.57■■□□□ 1.52
CHGA-204ENST00000556076 ZFYVE9O95405 1425 aa24.57■■□□□ 1.52
CHGA-204ENST00000556076 RIMS2Q9UQ26 1411 aa24.56■■□□□ 1.52
CHGA-204ENST00000556076 BCANQ96GW7 911 aa24.55■■□□□ 1.52
CHGA-204ENST00000556076 TOM1O60784 492 aa24.54■■□□□ 1.52
CHGA-204ENST00000556076 RBM33Q96EV2 1170 aaKnown RBP24.54■■□□□ 1.52
CHGA-204ENST00000556076 HSPA1LP34931 641 aa24.53■■□□□ 1.52
CHGA-204ENST00000556076 DISP3Q9P2K9 1392 aa24.52■■□□□ 1.52
CHGA-204ENST00000556076 SPHKAPQ2M3C7 1700 aa24.52■■□□□ 1.52
CHGA-204ENST00000556076 PPP1R15AO75807 674 aaPredicted RBP24.5■■□□□ 1.51
CHGA-204ENST00000556076 PLEKHG1Q9ULL1 1385 aa24.47■■□□□ 1.51
CHGA-204ENST00000556076 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
CHGA-204ENST00000556076 KCNA6P17658 529 aa24.46■■□□□ 1.51
CHGA-204ENST00000556076 TMEM94Q12767 1356 aa24.45■■□□□ 1.5
CHGA-204ENST00000556076 TRIM52Q96A61 297 aa24.45■■□□□ 1.5
CHGA-204ENST00000556076 CLTCL1P53675 1640 aa24.44■■□□□ 1.5
CHGA-204ENST00000556076 NWD1Q149M9 1564 aa24.43■■□□□ 1.5
CHGA-204ENST00000556076 PROSER2Q86WR7 435 aaPredicted RBP24.43■■□□□ 1.5
CHGA-204ENST00000556076 ILDR2Q71H61 639 aa24.42■■□□□ 1.5
CHGA-204ENST00000556076 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
CHGA-204ENST00000556076 ADAMTS13Q76LX8 1427 aa24.4■■□□□ 1.5
CHGA-204ENST00000556076 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.39■■□□□ 1.49
CHGA-204ENST00000556076 HDGFP51858 240 aaKnown RBP24.38■■□□□ 1.49
CHGA-204ENST00000556076 TRPM2O94759 1503 aa24.37■■□□□ 1.49
CHGA-204ENST00000556076 NKTRP30414 1462 aaKnown RBP24.37■■□□□ 1.49
CHGA-204ENST00000556076 ZNF326Q5BKZ1 582 aaKnown RBP24.36■■□□□ 1.49
CHGA-204ENST00000556076 FOXD1Q16676 465 aa24.35■■□□□ 1.49
CHGA-204ENST00000556076 TBX22Q9Y458 520 aa24.35■■□□□ 1.49
CHGA-204ENST00000556076 NRXN3Q9Y4C0 1643 aa24.35■■□□□ 1.49
CHGA-204ENST00000556076 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.49
CHGA-204ENST00000556076 KIF1BO60333 1816 aa24.32■■□□□ 1.48
CHGA-204ENST00000556076 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
CHGA-204ENST00000556076 DIP2AQ14689 1571 aa24.3■■□□□ 1.48
CHGA-204ENST00000556076 MED1Q15648 1581 aaPredicted RBP24.3■■□□□ 1.48
CHGA-204ENST00000556076 NEXMIFQ5QGS0 1516 aa24.3■■□□□ 1.48
CHGA-204ENST00000556076 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
CHGA-204ENST00000556076 SETBP1Q9Y6X0 1596 aa24.26■■□□□ 1.47
CHGA-204ENST00000556076 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
CHGA-204ENST00000556076 MSH6P52701 1360 aa24.25■■□□□ 1.47
CHGA-204ENST00000556076 METP08581 1390 aa24.24■■□□□ 1.47
CHGA-204ENST00000556076 FAM135BQ49AJ0 1406 aa24.22■■□□□ 1.47
CHGA-204ENST00000556076 C14orf37Q86TY3 774 aa24.22■■□□□ 1.47
CHGA-204ENST00000556076 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
CHGA-204ENST00000556076 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
CHGA-204ENST00000556076 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
CHGA-204ENST00000556076 MPHOSPH9Q99550 1183 aa24.19■■□□□ 1.46
CHGA-204ENST00000556076 SLAIN2Q9P270 581 aa24.19■■□□□ 1.46
CHGA-204ENST00000556076 PPLO60437 1756 aa24.16■■□□□ 1.46
CHGA-204ENST00000556076 SETD5Q9C0A6 1442 aa24.16■■□□□ 1.46
CHGA-204ENST00000556076 SETD1AO15047 1707 aaKnown RBP24.15■■□□□ 1.46
CHGA-204ENST00000556076 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
CHGA-204ENST00000556076 RGL3Q3MIN7 710 aa24.12■■□□□ 1.45
CHGA-204ENST00000556076 NCOA3Q9Y6Q9 1424 aa24.11■■□□□ 1.45
CHGA-204ENST00000556076 C19orf44Q9H6X5 657 aa24.11■■□□□ 1.45
CHGA-204ENST00000556076 RAB3GAP2Q9H2M9 1393 aa24.11■■□□□ 1.45
CHGA-204ENST00000556076 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
CHGA-204ENST00000556076 VGFO15240 615 aaPredicted RBP24.09■■□□□ 1.45
CHGA-204ENST00000556076 ATF3P18847 181 aa24.09■■□□□ 1.45
CHGA-204ENST00000556076 SPATA31E1Q6ZUB1 1445 aa24.08■■□□□ 1.44
CHGA-204ENST00000556076 NALCNQ8IZF0 1738 aa24.07■■□□□ 1.44
CHGA-204ENST00000556076 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
CHGA-204ENST00000556076 RPGRIP1LQ68CZ1 1315 aa24.07■■□□□ 1.44
CHGA-204ENST00000556076 ADGRF5Q8IZF2 1346 aa24.07■■□□□ 1.44
CHGA-204ENST00000556076 SOCS7O14512 581 aa24.06■■□□□ 1.44
CHGA-204ENST00000556076 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
CHGA-204ENST00000556076 IFT172Q9UG01 1749 aa24.05■■□□□ 1.44
CHGA-204ENST00000556076 COL16A1Q07092 1604 aaPredicted RBP24.04■■□□□ 1.44
CHGA-204ENST00000556076 ROBO2Q9HCK4 1378 aa24.03■■□□□ 1.44
CHGA-204ENST00000556076 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
CHGA-204ENST00000556076 RGS17Q9UGC6 210 aaPredicted RBP24.01■■□□□ 1.43
CHGA-204ENST00000556076 MST1RQ04912 1400 aa24.01■■□□□ 1.43
CHGA-204ENST00000556076 ADGRL3Q9HAR2 1447 aa24.01■■□□□ 1.43
CHGA-204ENST00000556076 DCCP43146 1447 aa23.98■■□□□ 1.43
CHGA-204ENST00000556076 AHDC1Q5TGY3 1603 aaPredicted RBP23.97■■□□□ 1.43
CHGA-204ENST00000556076 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
CHGA-204ENST00000556076 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
CHGA-204ENST00000556076 PTCH1Q13635 1447 aa23.96■■□□□ 1.43
CHGA-204ENST00000556076 TMEM132EQ6IEE7 984 aa23.95■■□□□ 1.42
CHGA-204ENST00000556076 STK26Q9P289 416 aa23.95■■□□□ 1.42
CHGA-204ENST00000556076 JCADQ9P266 1359 aa23.94■■□□□ 1.42
CHGA-204ENST00000556076 ANKRD30BQ9BXX2 1392 aa23.93■■□□□ 1.42
CHGA-204ENST00000556076 LRP6O75581 1613 aa23.92■■□□□ 1.42
CHGA-204ENST00000556076 PIK3C2GO75747 1445 aa23.91■■□□□ 1.42
CHGA-204ENST00000556076 NHSL1Q5SYE7 1610 aa23.91■■□□□ 1.42
CHGA-204ENST00000556076 POTEAQ6S8J7 498 aa23.89■■□□□ 1.41
CHGA-204ENST00000556076 WAPLQ7Z5K2 1190 aa23.89■■□□□ 1.41
CHGA-204ENST00000556076 PRAG1Q86YV5 1406 aa23.89■■□□□ 1.41
CHGA-204ENST00000556076 C1orf167Q5SNV9 1468 aa23.88■■□□□ 1.41
CHGA-204ENST00000556076 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
CHGA-204ENST00000556076 ORAI2Q96SN7 254 aa23.87■■□□□ 1.41
CHGA-204ENST00000556076 PLEKHH1Q9ULM0 1364 aa23.87■■□□□ 1.41
CHGA-204ENST00000556076 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
CHGA-204ENST00000556076 CFAP70Q5T0N1 1121 aa23.85■■□□□ 1.41
CHGA-204ENST00000556076 LRPPRCP42704 1394 aaKnown RBP23.85■■□□□ 1.41
CHGA-204ENST00000556076 NRXN1Q9ULB1 1477 aa23.83■■□□□ 1.41
CHGA-204ENST00000556076 NUTM2BA6NNL0 878 aaPredicted RBP23.83■■□□□ 1.41
CHGA-204ENST00000556076 NUTM2EB1AL46 878 aaPredicted RBP23.83■■□□□ 1.41
CHGA-204ENST00000556076 NUTM2AQ8IVF1 878 aaPredicted RBP23.83■■□□□ 1.41
CHGA-204ENST00000556076 KNDC1Q76NI1 1749 aa23.82■■□□□ 1.4
CHGA-204ENST00000556076 NUTM2FA1L443 756 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms