RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 BCL2L12Q9HB09 334 aa5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 PLSCR2Q9NRY7 297 aa5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 FAM198AQ9UFP1 575 aa5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 ZNF330Q9Y3S2 320 aaPredicted RBP5.4□□□□□ -1.54
MTHFD1-212ENST00000555858 ZBTB7CA1YPR0 619 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 NBPF26B4DH59 902 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 PPP1R3GB7ZBB8 358 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 COL9A1P20849 921 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 GJA5P36382 358 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 GPR153Q6NV75 609 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 WWC1Q8IX03 1113 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 MTMR14Q8NCE2 650 aa5.39□□□□□ -1.55
MTHFD1-212ENST00000555858 DDX11L8A8MPP1 907 aa5.38□□□□□ -1.55
MTHFD1-212ENST00000555858 PTPREP23469 700 aa5.38□□□□□ -1.55
MTHFD1-212ENST00000555858 NUDT18Q6ZVK8 323 aa5.38□□□□□ -1.55
MTHFD1-212ENST00000555858 PRM3Q9NNZ6 103 aa5.38□□□□□ -1.55
MTHFD1-212ENST00000555858 TSKSQ9UJT2 592 aa5.38□□□□□ -1.55
MTHFD1-212ENST00000555858 LHX6Q9UPM6 363 aa5.38□□□□□ -1.55
MTHFD1-212ENST00000555858 MOXD2PA6NHM9 499 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 LILRB3O75022 631 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 PACS2Q86VP3 889 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 ZNF710Q8N1W2 664 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 TATDN2Q93075 761 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 TMEM134Q9H6X4 195 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 GDPD2Q9HCC8 539 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 PNMA3Q9UL41 463 aa5.37□□□□□ -1.55
MTHFD1-212ENST00000555858 TRIM6-TRIM34B2RNG4 842 aa5.36□□□□□ -1.55
MTHFD1-212ENST00000555858 RANGAP1P46060 587 aaPredicted RBP5.36□□□□□ -1.55
MTHFD1-212ENST00000555858 CSPP1Q1MSJ5 1256 aa5.36□□□□□ -1.55
MTHFD1-212ENST00000555858 TRAIPQ9BWF2 469 aa5.36□□□□□ -1.55
MTHFD1-212ENST00000555858 AP1G2O75843 785 aa5.35□□□□□ -1.55
MTHFD1-212ENST00000555858 NDUFV2P19404 249 aa5.35□□□□□ -1.55
MTHFD1-212ENST00000555858 QPCTQ16769 361 aa5.35□□□□□ -1.55
MTHFD1-212ENST00000555858 PRPF38BQ5VTL8 546 aaKnown RBP5.35□□□□□ -1.55
MTHFD1-212ENST00000555858 NUTM2BA6NNL0 878 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 NUTM2EB1AL46 878 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 C3orf80F5H4A9 247 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 KDM4AO75164 1064 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 ABL2P42684 1182 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 USP46P62068 366 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 NUTM2DQ5VT03 806 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 NUTM2AQ8IVF1 878 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 KCTD17Q8N5Z5 321 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 RDH13Q8NBN7 331 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 NECTIN2Q92692 538 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 PCDHB15Q9Y5E8 787 aa5.34□□□□□ -1.55
MTHFD1-212ENST00000555858 USP17L8P0C7I0 530 aa5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 RTL5Q5HYW3 569 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 RSPH4AQ5TD94 716 aa5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 SP7Q8TDD2 431 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 CALR3Q96L12 384 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 ZBTB3Q9H5J0 574 aa5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 TBC1D2BQ9UPU7 963 aa5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 CCDC9Q9Y3X0 531 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-212ENST00000555858 HOXA2O43364 376 aa5.32□□□□□ -1.56
MTHFD1-212ENST00000555858 PPP1R15AO75807 674 aaPredicted RBP5.32□□□□□ -1.56
MTHFD1-212ENST00000555858 POTEJP0CG39 1038 aa5.32□□□□□ -1.56
MTHFD1-212ENST00000555858 GCGRP47871 477 aa5.32□□□□□ -1.56
MTHFD1-212ENST00000555858 CABLES1Q8TDN4 633 aa5.32□□□□□ -1.56
MTHFD1-212ENST00000555858 GLMNQ92990 594 aa5.32□□□□□ -1.56
MTHFD1-212ENST00000555858 SCUBE2Q9NQ36 999 aa5.32□□□□□ -1.56
MTHFD1-212ENST00000555858 SMAPO00193 183 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 FDX1P10109 184 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 PROX2Q3B8N5 592 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 POTEHQ6S545 545 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 MAMSTRQ6ZN01 415 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 RETREG2Q8NC44 543 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 KCNH8Q96L42 1107 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 NDUFB9Q9Y6M9 179 aa5.31□□□□□ -1.56
MTHFD1-212ENST00000555858 POM121CA8CG34 1229 aa5.3□□□□□ -1.56
MTHFD1-212ENST00000555858 HOXB1P14653 301 aaPredicted RBP5.3□□□□□ -1.56
MTHFD1-212ENST00000555858 NPM2Q86SE8 214 aaKnown RBP5.3□□□□□ -1.56
MTHFD1-212ENST00000555858 GJD4Q96KN9 370 aaPredicted RBP5.3□□□□□ -1.56
MTHFD1-212ENST00000555858 KCNK17Q96T54 332 aa5.3□□□□□ -1.56
MTHFD1-212ENST00000555858 SNPHO15079 494 aa5.29□□□□□ -1.56
MTHFD1-212ENST00000555858 PDE4CQ08493 712 aa5.29□□□□□ -1.56
MTHFD1-212ENST00000555858 WASHC4Q2M389 1173 aa5.29□□□□□ -1.56
MTHFD1-212ENST00000555858 HELBQ8NG08 1087 aaPredicted RBP5.29□□□□□ -1.56
MTHFD1-212ENST00000555858 KIAA1468Q9P260 1216 aa5.29□□□□□ -1.56
MTHFD1-212ENST00000555858 ACIN1Q9UKV3 1341 aaKnown RBP5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 POTEB2H3BUK9 544 aa5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 SLC10A3P09131 477 aa5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 IRF5Q13568 498 aa5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 MTMR2Q13614 643 aa5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 AEBP1Q8IUX7 1158 aa5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 ZBED2Q9BTP6 218 aa5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 PCDHGC3Q9UN70 934 aa5.28□□□□□ -1.56
MTHFD1-212ENST00000555858 SLC4A3P48751 1232 aa5.27□□□□□ -1.57
MTHFD1-212ENST00000555858 HDGFP51858 240 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-212ENST00000555858 CTDSPL2Q05D32 466 aa5.27□□□□□ -1.57
MTHFD1-212ENST00000555858 GRIPAP1Q4V328 841 aa5.27□□□□□ -1.57
MTHFD1-212ENST00000555858 SWT1Q5T5J6 900 aaKnown RBP5.27□□□□□ -1.57
MTHFD1-212ENST00000555858 HDGFL1Q5TGJ6 251 aa5.27□□□□□ -1.57
MTHFD1-212ENST00000555858 GUCA2AQ02747 115 aa5.26□□□□□ -1.57
MTHFD1-212ENST00000555858 PBXIP1Q96AQ6 731 aa5.26□□□□□ -1.57
MTHFD1-212ENST00000555858 TRIM34Q9BYJ4 488 aa5.26□□□□□ -1.57
MTHFD1-212ENST00000555858 HMX1Q9NP08 348 aaPredicted RBP5.26□□□□□ -1.57
MTHFD1-212ENST00000555858 RABGEF1Q9UJ41 708 aa5.26□□□□□ -1.57
MTHFD1-212ENST00000555858 GPR37L1O60883 481 aa5.25□□□□□ -1.57
MTHFD1-212ENST00000555858 SLF2Q8IX21 1173 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms